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Closed
RaederDev opened this issue Jun 18, 2018 · 2 comments
Closed

Cannot build any native modules on Linux #1473

RaederDev opened this issue Jun 18, 2018 · 2 comments

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@RaederDev
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  • Node Version:
    ~$ node -v
    v10.4.1
    ~$ npm -v
    6.1.0

  • Platform:
    Linux benjamin-pc 4.17.2-1-ARCH Make 0.6.x work #1 SMP PREEMPT Sat Jun 16 11:08:59 UTC 2018 x86_64 GNU/Linux

  • Compiler:
    Using built-in specs.
    COLLECT_GCC=cc
    COLLECT_LTO_WRAPPER=/usr/lib/gcc/x86_64-pc-linux-gnu/8.1.1/lto-wrapper
    Target: x86_64-pc-linux-gnu
    Configured with: /build/gcc/src/gcc/configure --prefix=/usr --libdir=/usr/lib --libexecdir=/usr/lib --mandir=/usr/share/man --infodir=/usr/share/info --with-bugurl=https://bugs.archlinux.org/ --enable-languages=c,c++,ada,fortran,go,lto,objc,obj-c++ --enable-shared --enable-threads=posix --enable-libmpx --with-system-zlib --with-isl --enable-__cxa_atexit --disable-libunwind-exceptions --enable-clocale=gnu --disable-libstdcxx-pch --disable-libssp --enable-gnu-unique-object --enable-linker-build-id --enable-lto --enable-plugin --enable-install-libiberty --with-linker-hash-style=gnu --enable-gnu-indirect-function --enable-multilib --disable-werror --enable-checking=release --enable-default-pie --enable-default-ssp
    Thread model: posix
    gcc version 8.1.1 20180531 (GCC)

  • Module:
    sqlite3, but this also happens with node-sass

Verbose output (from npm or node-gyp): 
npm info it worked if it ends with ok
npm verb cli [ '/usr/bin/node',
npm verb cli   '/usr/bin/npm',
npm verb cli   'i',
npm verb cli   'sqlite3',
npm verb cli   '--build-from-source',
npm verb cli   '--verbose' ]
npm info using npm@6.1.0
npm info using node@v10.4.1
npm verb npm-session b6ad9851b6307a56
npm http fetch GET 304 https://registry.npmjs.org/sqlite3 125ms (from cache)
npm timing stage:loadCurrentTree Completed in 1208ms
npm timing stage:loadIdealTree:cloneCurrentTree Completed in 9ms
npm timing stage:loadIdealTree:loadShrinkwrap Completed in 531ms
npm http fetch GET 304 https://registry.npmjs.org/nan 45ms (from cache)
npm timing stage:loadIdealTree:loadAllDepsIntoIdealTree Completed in 1283ms
npm timing stage:loadIdealTree Completed in 2078ms
npm timing stage:generateActionsToTake Completed in 83ms
npm verb correctMkdir /home/benni/.npm/_locks correctMkdir not in flight; initializing
npm verb lock using /home/benni/.npm/_locks/staging-079eaf90e4696a7c.lock for /home/benni/htdocs/redacted/node_modules/.staging
npm timing audit compress Completed in 25ms
npm info audit Submitting payload of 45003bytes
npm timing audit submit Completed in 1398ms
npm http fetch POST 200 https://registry.npmjs.org/-/npm/v1/security/audits/quick 1397ms
npm timing audit body Completed in 1ms
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npm info lifecycle @shopify/shopify-express@1.0.0-alpha.6~postpack: @shopify/shopify-express@1.0.0-alpha.6
npm timing action:extract Completed in 1659ms
npm timing action:finalize Completed in 144ms
npm timing action:refresh-package-json Completed in 188ms
npm info lifecycle nan@2.7.0~preinstall: nan@2.7.0
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npm info lifecycle sax@1.2.4~preinstall: sax@1.2.4
npm info lifecycle safe-buffer@5.1.1~preinstall: safe-buffer@5.1.1
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npm info lifecycle fs.realpath@1.0.0~preinstall: fs.realpath@1.0.0
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npm info lifecycle delegates@1.0.0~preinstall: delegates@1.0.0
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npm info lifecycle console-control-strings@1.1.0~preinstall: console-control-strings@1.1.0
npm info lifecycle brace-expansion@1.1.11~preinstall: brace-expansion@1.1.11
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npm info lifecycle tar-pack@3.4.0~preinstall: tar-pack@3.4.0
npm info lifecycle tar@2.2.1~preinstall: tar@2.2.1
npm info lifecycle fstream-ignore@1.0.5~preinstall: fstream-ignore@1.0.5
npm info lifecycle fstream@1.0.11~preinstall: fstream@1.0.11
npm info lifecycle rimraf@2.6.2~preinstall: rimraf@2.6.2
npm info lifecycle glob@7.1.2~preinstall: glob@7.1.2
npm info lifecycle inflight@1.0.6~preinstall: inflight@1.0.6
npm info lifecycle once@1.4.0~preinstall: once@1.4.0
npm info lifecycle wrappy@1.0.2~preinstall: wrappy@1.0.2
npm info lifecycle npmlog@4.1.2~preinstall: npmlog@4.1.2
npm info lifecycle gauge@2.7.4~preinstall: gauge@2.7.4
npm info lifecycle wide-align@1.1.2~preinstall: wide-align@1.1.2
npm info lifecycle request@2.81.0~preinstall: request@2.81.0
npm info lifecycle http-signature@1.1.1~preinstall: http-signature@1.1.1
npm info lifecycle jsprim@1.4.1~preinstall: jsprim@1.4.1
npm info lifecycle verror@1.10.0~preinstall: verror@1.10.0
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npm info lifecycle uuid@3.1.0~preinstall: uuid@3.1.0
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npm info lifecycle readable-stream@2.3.3~preinstall: readable-stream@2.3.3
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npm info lifecycle sshpk@1.13.1~preinstall: sshpk@1.13.1
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npm info lifecycle minimist@1.2.0~preinstall: minimist@1.2.0
npm info lifecycle qs@6.4.0~preinstall: qs@6.4.0
npm info lifecycle punycode@1.4.1~preinstall: punycode@1.4.1
npm info lifecycle process-nextick-args@1.0.7~preinstall: process-nextick-args@1.0.7
npm info lifecycle performance-now@0.2.0~preinstall: performance-now@0.2.0
npm info lifecycle path-is-absolute@1.0.1~preinstall: path-is-absolute@1.0.1
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npm info lifecycle os-tmpdir@1.0.2~preinstall: os-tmpdir@1.0.2
npm info lifecycle os-homedir@1.0.2~preinstall: os-homedir@1.0.2
npm info lifecycle object-assign@4.1.1~preinstall: object-assign@4.1.1
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npm info lifecycle number-is-nan@1.0.1~preinstall: number-is-nan@1.0.1
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npm info lifecycle assert-plus@1.0.0~preinstall: assert-plus@1.0.0
npm timing action:preinstall Completed in 36ms
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npm info linkStuff tough-cookie@2.3.3
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npm info linkStuff tweetnacl@0.14.5
npm info linkStuff bcrypt-pbkdf@1.0.1
npm info linkStuff sshpk@1.13.1
npm verb linkBins [ { 'sshpk-conv': 'bin/sshpk-conv',
npm verb linkBins     'sshpk-sign': 'bin/sshpk-sign',
npm verb linkBins     'sshpk-verify': 'bin/sshpk-verify' },
npm verb linkBins   '/home/benni/htdocs/redacted/node_modules/@shopify/shopify-express/node_modules/sqlite3/node_modules/.bin',
npm verb linkBins   false ]
npm info linkStuff uid-number@0.0.6
npm info linkStuff util-deprecate@1.0.2
npm info linkStuff readable-stream@2.3.3
npm info linkStuff are-we-there-yet@1.1.4
npm info linkStuff uuid@3.1.0
npm verb linkBins [ { uuid: './bin/uuid' },
npm verb linkBins   '/home/benni/htdocs/redacted/node_modules/@shopify/shopify-express/node_modules/sqlite3/node_modules/.bin',
npm verb linkBins   false ]
npm info linkStuff assert-plus@1.0.0
npm info linkStuff verror@1.10.0
npm info linkStuff jsprim@1.4.1
npm info linkStuff http-signature@1.1.1
npm info linkStuff request@2.81.0
npm info linkStuff wide-align@1.1.2
npm info linkStuff gauge@2.7.4
npm info linkStuff npmlog@4.1.2
npm info linkStuff wrappy@1.0.2
npm info linkStuff once@1.4.0
npm info linkStuff inflight@1.0.6
npm info linkStuff glob@7.1.2
npm info linkStuff rimraf@2.6.2
npm verb linkBins [ { rimraf: './bin.js' },
npm verb linkBins   '/home/benni/htdocs/redacted/node_modules/@shopify/shopify-express/node_modules/sqlite3/node_modules/.bin',
npm verb linkBins   false ]
npm info linkStuff fstream@1.0.11
npm info linkStuff fstream-ignore@1.0.5
npm info linkStuff tar@2.2.1
npm info linkStuff tar-pack@3.4.0
npm info linkStuff node-pre-gyp@0.6.38
npm verb linkBins [ { 'node-pre-gyp': './bin/node-pre-gyp' },
npm verb linkBins   '/home/benni/htdocs/redacted/node_modules/@shopify/shopify-express/node_modules/sqlite3/node_modules/.bin',
npm verb linkBins   false ]
npm info linkStuff sqlite3@3.1.13
npm info linkStuff abbrev@1.1.1
npm info linkStuff ansi-regex@2.1.1
npm info linkStuff aproba@1.2.0
npm info linkStuff balanced-match@1.0.0
npm info linkStuff chownr@1.0.1
npm info linkStuff code-point-at@1.1.0
npm info linkStuff concat-map@0.0.1
npm info linkStuff brace-expansion@1.1.11
npm info linkStuff console-control-strings@1.1.0
npm info linkStuff core-util-is@1.0.2
npm info linkStuff deep-extend@0.4.2
npm info linkStuff delegates@1.0.0
npm info linkStuff detect-libc@1.0.3
npm verb linkBins [ { 'detect-libc': './bin/detect-libc.js' },
npm verb linkBins   '/home/benni/htdocs/redacted/node_modules/sqlite3/node_modules/.bin',
npm verb linkBins   false ]
npm info linkStuff fs.realpath@1.0.0
npm info linkStuff has-unicode@2.0.1
npm info linkStuff iconv-lite@0.4.19
npm info linkStuff inherits@2.0.3
npm info linkStuff ini@1.3.5
npm info linkStuff isarray@1.0.0
npm info linkStuff minimatch@3.0.4
npm info linkStuff ignore-walk@3.0.1
npm info linkStuff minimist@0.0.8
npm info linkStuff mkdirp@0.5.1
npm verb linkBins [ { mkdirp: 'bin/cmd.js' },
npm verb linkBins   '/home/benni/htdocs/redacted/node_modules/sqlite3/node_modules/.bin',
npm verb linkBins   false ]
npm info linkStuff ms@2.0.0
npm info linkStuff debug@2.6.9
npm info linkStuff npm-bundled@1.0.3
npm info linkStuff npm-packlist@1.1.10
npm info linkStuff number-is-nan@1.0.1
npm info linkStuff is-fullwidth-code-point@1.0.0
npm info linkStuff object-assign@4.1.1
npm info linkStuff os-homedir@1.0.2
npm info linkStuff os-tmpdir@1.0.2
npm info linkStuff osenv@0.1.5
npm info linkStuff nopt@4.0.1
npm verb linkBins [ { nopt: './bin/nopt.js' },
npm verb linkBins   '/home/benni/htdocs/redacted/node_modules/sqlite3/node_modules/.bin',
npm verb linkBins   false ]
npm info linkStuff path-is-absolute@1.0.1
npm info linkStuff process-nextick-args@2.0.0
npm info linkStuff minimist@1.2.0
npm info linkStuff safe-buffer@5.1.1
npm info linkStuff sax@1.2.4
npm info linkStuff needle@2.2.0
npm verb linkBins [ { needle: './bin/needle' },
npm verb linkBins   '/home/benni/htdocs/redacted/node_modules/sqlite3/node_modules/.bin',
npm verb linkBins   false ]
npm info linkStuff semver@5.5.0
npm verb linkBins [ { semver: './bin/semver' },
npm verb linkBins   '/home/benni/htdocs/redacted/node_modules/sqlite3/node_modules/.bin',
npm verb linkBins   false ]
npm info linkStuff set-blocking@2.0.0
npm info linkStuff signal-exit@3.0.2
npm info linkStuff string_decoder@1.0.3
npm info linkStuff strip-ansi@3.0.1
npm info linkStuff string-width@1.0.2
npm info linkStuff strip-json-comments@2.0.1
npm info linkStuff rc@1.2.6
npm verb linkBins [ { rc: './cli.js' },
npm verb linkBins   '/home/benni/htdocs/redacted/node_modules/sqlite3/node_modules/.bin',
npm verb linkBins   false ]
npm info linkStuff util-deprecate@1.0.2
npm info linkStuff readable-stream@2.3.5
npm info linkStuff are-we-there-yet@1.1.4
npm info linkStuff wide-align@1.1.2
npm info linkStuff gauge@2.7.4
npm info linkStuff npmlog@4.1.2
npm info linkStuff wrappy@1.0.2
npm info linkStuff once@1.4.0
npm info linkStuff inflight@1.0.6
npm info linkStuff glob@7.1.2
npm info linkStuff rimraf@2.6.2
npm verb linkBins [ { rimraf: './bin.js' },
npm verb linkBins   '/home/benni/htdocs/redacted/node_modules/sqlite3/node_modules/.bin',
npm verb linkBins   false ]
npm info linkStuff yallist@3.0.2
npm info linkStuff minipass@2.2.1
npm info linkStuff fs-minipass@1.2.5
npm info linkStuff minizlib@1.1.0
npm info linkStuff tar@4.4.0
npm info linkStuff @shopify/shopify-express@git+https://github.com/DigitalsunrayMedia/shopify-express.git#d90aae691dd24173d9af2f2671cdfe254da67d3e
npm info linkStuff nan@2.9.2
npm info linkStuff node-pre-gyp@0.9.0
npm verb linkBins [ { 'node-pre-gyp': './bin/node-pre-gyp' },
npm verb linkBins   '/home/benni/htdocs/redacted/node_modules/sqlite3/node_modules/.bin',
npm verb linkBins   false ]
npm info linkStuff sqlite3@4.0.0
npm timing action:build Completed in 48ms
npm info lifecycle nan@2.7.0~install: nan@2.7.0
npm info lifecycle node-fetch@1.7.3~install: node-fetch@1.7.3
npm info lifecycle abbrev@1.1.1~install: abbrev@1.1.1
npm info lifecycle ansi-regex@2.1.1~install: ansi-regex@2.1.1
npm info lifecycle aproba@1.2.0~install: aproba@1.2.0
npm info lifecycle asn1@0.2.3~install: asn1@0.2.3
npm info lifecycle assert-plus@0.2.0~install: assert-plus@0.2.0
npm info lifecycle asynckit@0.4.0~install: asynckit@0.4.0
npm info lifecycle aws-sign2@0.6.0~install: aws-sign2@0.6.0
npm info lifecycle aws4@1.6.0~install: aws4@1.6.0
npm info lifecycle balanced-match@1.0.0~install: balanced-match@1.0.0
npm info lifecycle caseless@0.12.0~install: caseless@0.12.0
npm info lifecycle co@4.6.0~install: co@4.6.0
npm info lifecycle code-point-at@1.1.0~install: code-point-at@1.1.0
npm info lifecycle concat-map@0.0.1~install: concat-map@0.0.1
npm info lifecycle brace-expansion@1.1.8~install: brace-expansion@1.1.8
npm info lifecycle console-control-strings@1.1.0~install: console-control-strings@1.1.0
npm info lifecycle core-util-is@1.0.2~install: core-util-is@1.0.2
npm info lifecycle assert-plus@1.0.0~install: assert-plus@1.0.0
npm info lifecycle dashdash@1.14.1~install: dashdash@1.14.1
npm info lifecycle deep-extend@0.4.2~install: deep-extend@0.4.2
npm info lifecycle delayed-stream@1.0.0~install: delayed-stream@1.0.0
npm info lifecycle combined-stream@1.0.5~install: combined-stream@1.0.5
npm info lifecycle delegates@1.0.0~install: delegates@1.0.0
npm info lifecycle extend@3.0.1~install: extend@3.0.1
npm info lifecycle extsprintf@1.3.0~install: extsprintf@1.3.0
npm info lifecycle forever-agent@0.6.1~install: forever-agent@0.6.1
npm info lifecycle fs.realpath@1.0.0~install: fs.realpath@1.0.0
npm info lifecycle assert-plus@1.0.0~install: assert-plus@1.0.0
npm info lifecycle getpass@0.1.7~install: getpass@0.1.7
npm info lifecycle graceful-fs@4.1.11~install: graceful-fs@4.1.11
npm info lifecycle har-schema@1.0.5~install: har-schema@1.0.5
npm info lifecycle has-unicode@2.0.1~install: has-unicode@2.0.1
npm info lifecycle hoek@2.16.3~install: hoek@2.16.3
npm info lifecycle boom@2.10.1~install: boom@2.10.1
npm info lifecycle cryptiles@2.0.5~install: cryptiles@2.0.5
npm info lifecycle inherits@2.0.3~install: inherits@2.0.3
npm info lifecycle block-stream@0.0.9~install: block-stream@0.0.9
npm info lifecycle ini@1.3.4~install: ini@1.3.4
npm info lifecycle is-typedarray@1.0.0~install: is-typedarray@1.0.0
npm info lifecycle isarray@1.0.0~install: isarray@1.0.0
npm info lifecycle isstream@0.1.2~install: isstream@0.1.2
npm info lifecycle jsbn@0.1.1~install: jsbn@0.1.1
npm info lifecycle ecc-jsbn@0.1.1~install: ecc-jsbn@0.1.1
npm info lifecycle json-schema@0.2.3~install: json-schema@0.2.3
npm info lifecycle json-stringify-safe@5.0.1~install: json-stringify-safe@5.0.1
npm info lifecycle jsonify@0.0.0~install: jsonify@0.0.0
npm info lifecycle json-stable-stringify@1.0.1~install: json-stable-stringify@1.0.1
npm info lifecycle ajv@4.11.8~install: ajv@4.11.8
npm info lifecycle har-validator@4.2.1~install: har-validator@4.2.1
npm info lifecycle assert-plus@1.0.0~install: assert-plus@1.0.0
npm info lifecycle mime-db@1.30.0~install: mime-db@1.30.0
npm info lifecycle mime-types@2.1.17~install: mime-types@2.1.17
npm info lifecycle form-data@2.1.4~install: form-data@2.1.4
npm info lifecycle minimatch@3.0.4~install: minimatch@3.0.4
npm info lifecycle minimist@0.0.8~install: minimist@0.0.8
npm info lifecycle mkdirp@0.5.1~install: mkdirp@0.5.1
npm info lifecycle ms@2.0.0~install: ms@2.0.0
npm info lifecycle debug@2.6.9~install: debug@2.6.9
npm info lifecycle number-is-nan@1.0.1~install: number-is-nan@1.0.1
npm info lifecycle is-fullwidth-code-point@1.0.0~install: is-fullwidth-code-point@1.0.0
npm info lifecycle oauth-sign@0.8.2~install: oauth-sign@0.8.2
npm info lifecycle object-assign@4.1.1~install: object-assign@4.1.1
npm info lifecycle os-homedir@1.0.2~install: os-homedir@1.0.2
npm info lifecycle os-tmpdir@1.0.2~install: os-tmpdir@1.0.2
npm info lifecycle osenv@0.1.4~install: osenv@0.1.4
npm info lifecycle nopt@4.0.1~install: nopt@4.0.1
npm info lifecycle path-is-absolute@1.0.1~install: path-is-absolute@1.0.1
npm info lifecycle performance-now@0.2.0~install: performance-now@0.2.0
npm info lifecycle process-nextick-args@1.0.7~install: process-nextick-args@1.0.7
npm info lifecycle punycode@1.4.1~install: punycode@1.4.1
npm info lifecycle qs@6.4.0~install: qs@6.4.0
npm info lifecycle minimist@1.2.0~install: minimist@1.2.0
npm info lifecycle safe-buffer@5.1.1~install: safe-buffer@5.1.1
npm info lifecycle semver@5.4.1~install: semver@5.4.1
npm info lifecycle set-blocking@2.0.0~install: set-blocking@2.0.0
npm info lifecycle signal-exit@3.0.2~install: signal-exit@3.0.2
npm info lifecycle sntp@1.0.9~install: sntp@1.0.9
npm info lifecycle hawk@3.1.3~install: hawk@3.1.3
npm info lifecycle assert-plus@1.0.0~install: assert-plus@1.0.0
npm info lifecycle string_decoder@1.0.3~install: string_decoder@1.0.3
npm info lifecycle stringstream@0.0.5~install: stringstream@0.0.5
npm info lifecycle strip-ansi@3.0.1~install: strip-ansi@3.0.1
npm info lifecycle string-width@1.0.2~install: string-width@1.0.2
npm info lifecycle strip-json-comments@2.0.1~install: strip-json-comments@2.0.1
npm info lifecycle rc@1.2.1~install: rc@1.2.1
npm info lifecycle tough-cookie@2.3.3~install: tough-cookie@2.3.3
npm info lifecycle tunnel-agent@0.6.0~install: tunnel-agent@0.6.0
npm info lifecycle tweetnacl@0.14.5~install: tweetnacl@0.14.5
npm info lifecycle bcrypt-pbkdf@1.0.1~install: bcrypt-pbkdf@1.0.1
npm info lifecycle sshpk@1.13.1~install: sshpk@1.13.1
npm info lifecycle uid-number@0.0.6~install: uid-number@0.0.6
npm info lifecycle util-deprecate@1.0.2~install: util-deprecate@1.0.2
npm info lifecycle readable-stream@2.3.3~install: readable-stream@2.3.3
npm info lifecycle are-we-there-yet@1.1.4~install: are-we-there-yet@1.1.4
npm info lifecycle uuid@3.1.0~install: uuid@3.1.0
npm info lifecycle assert-plus@1.0.0~install: assert-plus@1.0.0
npm info lifecycle verror@1.10.0~install: verror@1.10.0
npm info lifecycle jsprim@1.4.1~install: jsprim@1.4.1
npm info lifecycle http-signature@1.1.1~install: http-signature@1.1.1
npm info lifecycle request@2.81.0~install: request@2.81.0
npm info lifecycle wide-align@1.1.2~install: wide-align@1.1.2
npm info lifecycle gauge@2.7.4~install: gauge@2.7.4
npm info lifecycle npmlog@4.1.2~install: npmlog@4.1.2
npm info lifecycle wrappy@1.0.2~install: wrappy@1.0.2
npm info lifecycle once@1.4.0~install: once@1.4.0
npm info lifecycle inflight@1.0.6~install: inflight@1.0.6
npm info lifecycle glob@7.1.2~install: glob@7.1.2
npm info lifecycle rimraf@2.6.2~install: rimraf@2.6.2
npm info lifecycle fstream@1.0.11~install: fstream@1.0.11
npm info lifecycle fstream-ignore@1.0.5~install: fstream-ignore@1.0.5
npm info lifecycle tar@2.2.1~install: tar@2.2.1
npm info lifecycle tar-pack@3.4.0~install: tar-pack@3.4.0
npm info lifecycle node-pre-gyp@0.6.38~install: node-pre-gyp@0.6.38
npm info lifecycle sqlite3@3.1.13~install: sqlite3@3.1.13

> sqlite3@3.1.13 install /home/benni/htdocs/redacted/node_modules/@shopify/shopify-express/node_modules/sqlite3
> node-pre-gyp install --fallback-to-build

node-pre-gyp info it worked if it ends with ok
node-pre-gyp verb cli [ '/usr/bin/node',
node-pre-gyp verb cli   '/home/benni/htdocs/redacted/node_modules/@shopify/shopify-express/node_modules/sqlite3/node_modules/.bin/node-pre-gyp',
node-pre-gyp verb cli   'install',
node-pre-gyp verb cli   '--fallback-to-build' ]
node-pre-gyp info using node-pre-gyp@0.6.38
node-pre-gyp info using node@10.4.1 | linux | x64
node-pre-gyp verb command install []
node-pre-gyp info build requesting source compile
node-pre-gyp verb command build [ 'rebuild' ]
gyp info it worked if it ends with ok
gyp verb cli [ '/usr/bin/node',
gyp verb cli   '/usr/lib/node_modules/npm/node_modules/node-gyp/bin/node-gyp.js',
gyp verb cli   'clean' ]
gyp info using node-gyp@3.6.2
gyp info using node@10.4.1 | linux | x64
gyp verb command clean []
gyp verb clean removing "build" directory
gyp info ok 
gyp info it worked if it ends with ok
gyp verb cli [ '/usr/bin/node',
gyp verb cli   '/usr/lib/node_modules/npm/node_modules/node-gyp/bin/node-gyp.js',
gyp verb cli   'configure',
gyp verb cli   '--fallback-to-build',
gyp verb cli   '--module=/home/benni/htdocs/redacted/node_modules/@shopify/shopify-express/node_modules/sqlite3/lib/binding/node-v64-linux-x64/node_sqlite3.node',
gyp verb cli   '--module_name=node_sqlite3',
gyp verb cli   '--module_path=/home/benni/htdocs/redacted/node_modules/@shopify/shopify-express/node_modules/sqlite3/lib/binding/node-v64-linux-x64' ]
gyp info using node-gyp@3.6.2
gyp info using node@10.4.1 | linux | x64
gyp verb command configure []
gyp verb check python checking for Python executable "python2" in the PATH
gyp verb `which` succeeded python2 /usr/bin/python2
gyp verb check python version `/usr/bin/python2 -c "import platform; print(platform.python_version());"` returned: "2.7.15\n"
gyp verb get node dir no --target version specified, falling back to host node version: 10.4.1
gyp verb command install [ '10.4.1' ]
gyp verb install input version string "10.4.1"
gyp verb install installing version: 10.4.1
gyp verb install --ensure was passed, so won't reinstall if already installed
gyp verb install version is already installed, need to check "installVersion"
gyp verb got "installVersion" 9
gyp verb needs "installVersion" 9
gyp verb install version is good
gyp verb get node dir target node version installed: 10.4.1
gyp verb build dir attempting to create "build" dir: /home/benni/htdocs/redacted/node_modules/@shopify/shopify-express/node_modules/sqlite3/build
gyp verb build dir "build" dir needed to be created? /home/benni/htdocs/redacted/node_modules/@shopify/shopify-express/node_modules/sqlite3/build
gyp verb build/config.gypi creating config file
gyp verb build/config.gypi writing out config file: /home/benni/htdocs/redacted/node_modules/@shopify/shopify-express/node_modules/sqlite3/build/config.gypi
gyp verb config.gypi checking for gypi file: /home/benni/htdocs/redacted/node_modules/@shopify/shopify-express/node_modules/sqlite3/config.gypi
gyp verb common.gypi checking for gypi file: /home/benni/htdocs/redacted/node_modules/@shopify/shopify-express/node_modules/sqlite3/common.gypi
gyp verb gyp gyp format was not specified; forcing "make"
gyp info spawn /usr/bin/python2
gyp info spawn args [ '/usr/lib/node_modules/npm/node_modules/node-gyp/gyp/gyp_main.py',
gyp info spawn args   'binding.gyp',
gyp info spawn args   '-f',
gyp info spawn args   'make',
gyp info spawn args   '-I',
gyp info spawn args   '/home/benni/htdocs/redacted/node_modules/@shopify/shopify-express/node_modules/sqlite3/build/config.gypi',
gyp info spawn args   '-I',
gyp info spawn args   '/usr/lib/node_modules/npm/node_modules/node-gyp/addon.gypi',
gyp info spawn args   '-I',
gyp info spawn args   '/home/benni/.node-gyp/10.4.1/include/node/common.gypi',
gyp info spawn args   '-Dlibrary=shared_library',
gyp info spawn args   '-Dvisibility=default',
gyp info spawn args   '-Dnode_root_dir=/home/benni/.node-gyp/10.4.1',
gyp info spawn args   '-Dnode_gyp_dir=/usr/lib/node_modules/npm/node_modules/node-gyp',
gyp info spawn args   '-Dnode_lib_file=/home/benni/.node-gyp/10.4.1/<(target_arch)/node.lib',
gyp info spawn args   '-Dmodule_root_dir=/home/benni/htdocs/redacted/node_modules/@shopify/shopify-express/node_modules/sqlite3',
gyp info spawn args   '-Dnode_engine=v8',
gyp info spawn args   '--depth=.',
gyp info spawn args   '--no-parallel',
gyp info spawn args   '--generator-output',
gyp info spawn args   'build',
gyp info spawn args   '-Goutput_dir=.' ]
gyp info ok 
gyp info it worked if it ends with ok
gyp verb cli [ '/usr/bin/node',
gyp verb cli   '/usr/lib/node_modules/npm/node_modules/node-gyp/bin/node-gyp.js',
gyp verb cli   'build',
gyp verb cli   '--fallback-to-build',
gyp verb cli   '--module=/home/benni/htdocs/redacted/node_modules/@shopify/shopify-express/node_modules/sqlite3/lib/binding/node-v64-linux-x64/node_sqlite3.node',
gyp verb cli   '--module_name=node_sqlite3',
gyp verb cli   '--module_path=/home/benni/htdocs/redacted/node_modules/@shopify/shopify-express/node_modules/sqlite3/lib/binding/node-v64-linux-x64' ]
gyp info using node-gyp@3.6.2
gyp info using node@10.4.1 | linux | x64
gyp verb command build []
gyp verb build type Release
gyp verb architecture x64
gyp verb node dev dir /home/benni/.node-gyp/10.4.1
gyp verb `which` succeeded for `make` /usr/bin/make
gyp info spawn make
gyp info spawn args [ 'V=1', 'BUILDTYPE=Release', '-C', 'build' ]
make: Entering directory '/home/benni/htdocs/redacted/node_modules/@shopify/shopify-express/node_modules/sqlite3/build'
  LD_LIBRARY_PATH=/home/benni/htdocs/redacted/node_modules/@shopify/shopify-express/node_modules/sqlite3/build/Release/lib.host:/home/benni/htdocs/redacted/node_modules/@shopify/shopify-express/node_modules/sqlite3/build/Release/lib.target:$LD_LIBRARY_PATH; export LD_LIBRARY_PATH; cd ../deps; mkdir -p /home/benni/htdocs/redacted/node_modules/@shopify/shopify-express/node_modules/sqlite3/build/Release/obj/gen/sqlite-autoconf-3150000; python ./extract.py ./sqlite-autoconf-3150000.tar.gz "/home/benni/htdocs/redacted/node_modules/@shopify/shopify-express/node_modules/sqlite3/build/Release/obj/gen"
  touch Release/obj.target/deps/action_before_build.stamp
  cc '-DNODE_GYP_MODULE_NAME=sqlite3' '-DUSING_UV_SHARED=1' '-DUSING_V8_SHARED=1' '-DV8_DEPRECATION_WARNINGS=1' '-D_LARGEFILE_SOURCE' '-D_FILE_OFFSET_BITS=64' '-D_REENTRANT=1' '-DSQLITE_THREADSAFE=1' '-DSQLITE_ENABLE_FTS3' '-DSQLITE_ENABLE_FTS4' '-DSQLITE_ENABLE_FTS5' '-DSQLITE_ENABLE_JSON1' '-DSQLITE_ENABLE_RTREE' '-DNDEBUG' -I/home/benni/.node-gyp/10.4.1/include/node -I/home/benni/.node-gyp/10.4.1/src -I/home/benni/.node-gyp/10.4.1/deps/uv/include -I/home/benni/.node-gyp/10.4.1/deps/v8/include -I./Release/obj/gen/sqlite-autoconf-3150000  -std=c99 -fPIC -pthread -Wall -Wextra -Wno-unused-parameter -m64 -O3 -fno-omit-frame-pointer  -MMD -MF ./Release/.deps/Release/obj.target/sqlite3/gen/sqlite-autoconf-3150000/sqlite3.o.d.raw  -j5 -c -o Release/obj.target/sqlite3/gen/sqlite-autoconf-3150000/sqlite3.o Release/obj/gen/sqlite-autoconf-3150000/sqlite3.c
cc: error: unrecognized command line option ‘-j5’
make: *** [deps/sqlite3.target.mk:123: Release/obj.target/sqlite3/gen/sqlite-autoconf-3150000/sqlite3.o] Error 1
make: Leaving directory '/home/benni/htdocs/redacted/node_modules/@shopify/shopify-express/node_modules/sqlite3/build'
gyp ERR! build error 
gyp ERR! stack Error: `make` failed with exit code: 2
gyp ERR! stack     at ChildProcess.onExit (/usr/lib/node_modules/npm/node_modules/node-gyp/lib/build.js:258:23)
gyp ERR! stack     at ChildProcess.emit (events.js:182:13)
gyp ERR! stack     at Process.ChildProcess._handle.onexit (internal/child_process.js:237:12)
gyp ERR! System Linux 4.17.2-1-ARCH
gyp ERR! command "/usr/bin/node" "/usr/lib/node_modules/npm/node_modules/node-gyp/bin/node-gyp.js" "build" "--fallback-to-build" "--module=/home/benni/htdocs/redacted/node_modules/@shopify/shopify-express/node_modules/sqlite3/lib/binding/node-v64-linux-x64/node_sqlite3.node" "--module_name=node_sqlite3" "--module_path=/home/benni/htdocs/redacted/node_modules/@shopify/shopify-express/node_modules/sqlite3/lib/binding/node-v64-linux-x64"
gyp ERR! cwd /home/benni/htdocs/redacted/node_modules/@shopify/shopify-express/node_modules/sqlite3
gyp ERR! node -v v10.4.1
gyp ERR! node-gyp -v v3.6.2
gyp ERR! not ok 
node-pre-gyp ERR! build error 
node-pre-gyp ERR! stack Error: Failed to execute '/usr/bin/node /usr/lib/node_modules/npm/node_modules/node-gyp/bin/node-gyp.js build --fallback-to-build --module=/home/benni/htdocs/redacted/node_modules/@shopify/shopify-express/node_modules/sqlite3/lib/binding/node-v64-linux-x64/node_sqlite3.node --module_name=node_sqlite3 --module_path=/home/benni/htdocs/redacted/node_modules/@shopify/shopify-express/node_modules/sqlite3/lib/binding/node-v64-linux-x64' (1)
node-pre-gyp ERR! stack     at ChildProcess.<anonymous> (/home/benni/htdocs/redacted/node_modules/@shopify/shopify-express/node_modules/sqlite3/node_modules/node-pre-gyp/lib/util/compile.js:83:29)
node-pre-gyp ERR! stack     at ChildProcess.emit (events.js:182:13)
node-pre-gyp ERR! stack     at maybeClose (internal/child_process.js:961:16)
node-pre-gyp ERR! stack     at Process.ChildProcess._handle.onexit (internal/child_process.js:248:5)
node-pre-gyp ERR! System Linux 4.17.2-1-ARCH
node-pre-gyp ERR! command "/usr/bin/node" "/home/benni/htdocs/redacted/node_modules/@shopify/shopify-express/node_modules/sqlite3/node_modules/.bin/node-pre-gyp" "install" "--fallback-to-build"
node-pre-gyp ERR! cwd /home/benni/htdocs/redacted/node_modules/@shopify/shopify-express/node_modules/sqlite3
node-pre-gyp ERR! node -v v10.4.1
node-pre-gyp ERR! node-pre-gyp -v v0.6.38
node-pre-gyp ERR! not ok 
Failed to execute '/usr/bin/node /usr/lib/node_modules/npm/node_modules/node-gyp/bin/node-gyp.js build --fallback-to-build --module=/home/benni/htdocs/redacted/node_modules/@shopify/shopify-express/node_modules/sqlite3/lib/binding/node-v64-linux-x64/node_sqlite3.node --module_name=node_sqlite3 --module_path=/home/benni/htdocs/redacted/node_modules/@shopify/shopify-express/node_modules/sqlite3/lib/binding/node-v64-linux-x64' (1)
npm verb lifecycle sqlite3@3.1.13~install: unsafe-perm in lifecycle true
npm verb lifecycle sqlite3@3.1.13~install: PATH: /usr/lib/node_modules/npm/node_modules/npm-lifecycle/node-gyp-bin:/home/benni/htdocs/redacted/node_modules/@shopify/shopify-express/node_modules/sqlite3/node_modules/.bin:/home/benni/htdocs/redacted/node_modules/@shopify/shopify-express/node_modules/.bin:/home/benni/htdocs/redacted/node_modules/.bin:/home/benni/.composer/vendor/bin/:/home/benni/.gem/ruby/2.5.0/bin:/home/benni/.gem/ruby/2.4.0/bin:/home/benni/.gem/ruby/2.3.0/bin:/home/benni/opt/android-sdk/platform-tools/:/home/benni/opt/android-sdk/tools/:/usr/local/bin:/usr/bin:/bin:/usr/local/sbin:/opt/adobe-air-sdk/bin:/opt/android-sdk/platform-tools:/usr/lib/jvm/default/bin:/usr/bin/site_perl:/usr/bin/vendor_perl:/usr/bin/core_perl
npm verb lifecycle sqlite3@3.1.13~install: CWD: /home/benni/htdocs/redacted/node_modules/@shopify/shopify-express/node_modules/sqlite3
npm info lifecycle sqlite3@3.1.13~install: Failed to exec install script
npm timing action:install Completed in 741ms
npm verb unlock done using /home/benni/.npm/_locks/staging-079eaf90e4696a7c.lock for /home/benni/htdocs/redacted/node_modules/.staging
npm timing stage:rollbackFailedOptional Completed in 133ms
npm timing stage:runTopLevelLifecycles Completed in 6569ms
npm WARN @nestjs/common@4.5.9 requires a peer of reflect-metadata@0.1.10 but none is installed. You must install peer dependencies yourself.
npm WARN @nestjs/core@4.5.10 requires a peer of reflect-metadata@0.1.10 but none is installed. You must install peer dependencies yourself.
npm WARN @nestjs/microservices@4.5.8 requires a peer of reflect-metadata@0.1.10 but none is installed. You must install peer dependencies yourself.
npm WARN @nestjs/swagger@1.1.4 requires a peer of reflect-metadata@0.1.10 but none is installed. You must install peer dependencies yourself.
npm WARN @nestjs/websockets@4.5.8 requires a peer of reflect-metadata@0.1.10 but none is installed. You must install peer dependencies yourself.
npm WARN dsr_dpm@0.1.0-dev No repository field.
npm WARN optional SKIPPING OPTIONAL DEPENDENCY: fsevents@1.1.3 (node_modules/fsevents):
npm WARN notsup SKIPPING OPTIONAL DEPENDENCY: Unsupported platform for fsevents@1.1.3: wanted {"os":"darwin","arch":"any"} (current: {"os":"linux","arch":"x64"})
npm verb notsup SKIPPING OPTIONAL DEPENDENCY: Valid OS:    darwin
npm verb notsup SKIPPING OPTIONAL DEPENDENCY: Valid Arch:  any
npm verb notsup SKIPPING OPTIONAL DEPENDENCY: Actual OS:   linux
npm verb notsup SKIPPING OPTIONAL DEPENDENCY: Actual Arch: x64

npm verb stack Error: sqlite3@3.1.13 install: `node-pre-gyp install --fallback-to-build`
npm verb stack Exit status 1
npm verb stack     at EventEmitter.<anonymous> (/usr/lib/node_modules/npm/node_modules/npm-lifecycle/index.js:304:16)
npm verb stack     at EventEmitter.emit (events.js:182:13)
npm verb stack     at ChildProcess.<anonymous> (/usr/lib/node_modules/npm/node_modules/npm-lifecycle/lib/spawn.js:55:14)
npm verb stack     at ChildProcess.emit (events.js:182:13)
npm verb stack     at maybeClose (internal/child_process.js:961:16)
npm verb stack     at Process.ChildProcess._handle.onexit (internal/child_process.js:248:5)
npm verb pkgid sqlite3@3.1.13
npm verb cwd /home/benni/htdocs/redacted
npm verb Linux 4.17.2-1-ARCH
npm verb argv "/usr/bin/node" "/usr/bin/npm" "i" "sqlite3" "--build-from-source" "--verbose"
npm verb node v10.4.1
npm verb npm  v6.1.0
npm ERR! code ELIFECYCLE
npm ERR! errno 1
npm ERR! sqlite3@3.1.13 install: `node-pre-gyp install --fallback-to-build`
npm ERR! Exit status 1
npm ERR! 
npm ERR! Failed at the sqlite3@3.1.13 install script.
npm ERR! This is probably not a problem with npm. There is likely additional logging output above.
npm verb exit [ 1, true ]
npm timing npm Completed in 7119ms

Seems like gyp is passing "-j" to cc. Shouldn't this be a make option?
@bnoordhuis
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That doesn't come from node-gyp. If it happens with multiple projects, you probably have something in your environment (e.g. CFLAGS) or maybe in your .npmrc.

@RaederDev
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Removing my local CFLAGS variable solved the issue, thank you!

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@bnoordhuis @RaederDev