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    65 repositories

    • ninjaGUI

      Public
      fNIRS data acquisition GUI
      MATLAB
      •6•10•1•0•Updated Feb 3, 2025Feb 3, 2025

    • ninjaCap2

      Public
      MATLAB
      •0•2•0•0•Updated Feb 3, 2025Feb 3, 2025

    • OCTBesselStalls

      Public
      0•0•0•0•Updated Jan 22, 2025Jan 22, 2025

    • snirf2bids

      Public
      Python package for generating BIDS-fNIRS files from SNIRF files
      bidsfnirssnirf
      Python
      •
      MIT License
      •5•3•0•0•Updated Jan 15, 2025Jan 15, 2025

    • ninjaWeb

      Public
      Python
      •0•0•0•0•Updated Jan 8, 2025Jan 8, 2025

    • pysnirf2

      Public
      Python package for reading, writing and validating Shared Near Infrared Spectroscopy Format (SNIRF) files
      fnirsbrain-imagingnirsopenfnirsnear-infrared-spectroscopysnirf
      Python
      •
      GNU General Public License v3.0
      •13•16•4•1•Updated Dec 31, 2024Dec 31, 2024

    • AtlasViewer

      Public
      MATLAB application for imaging and reconstruction of fNIRS data on atlas anatomy
      MATLAB
      •
      Other
      •16•33•6•2•Updated Oct 15, 2024Oct 15, 2024

    • psoct_vessel_graphing

      Public
      Suite of tools for segmenting vessels from PS-OCT images and then converting the segments to a graph.
      MATLAB
      •6•1•7•0•Updated Sep 12, 2024Sep 12, 2024

    • NN22-Technical-Documents

      Public
      Repository for the storage and dissemination of NN22 technical documents
      C
      •1•7•1•0•Updated Aug 29, 2024Aug 29, 2024

    • fNIRS_tools

      Public
      Python
      •0•0•0•0•Updated Aug 14, 2024Aug 14, 2024

    • Homer3

      Public
      MATLAB application for fNIRS data processing and visualization
      fnirsneuroscienceneuroimaging
      MATLAB
      •55•96•17•6•Updated Aug 13, 2024Aug 13, 2024

    • DataTree

      Public
      MATLAB
      •4•2•1•0•Updated Jun 20, 2024Jun 20, 2024

    • Utils

      Public
      MATLAB
      •2•0•0•0•Updated May 28, 2024May 28, 2024

    • FuncRegistry

      Public
      MATLAB
      •1•0•0•0•Updated May 28, 2024May 28, 2024

    • SCOT_Rytov

      Public
      MATLAB
      •0•0•0•0•Updated Apr 2, 2024Apr 2, 2024

    • snirf_quality_report

      Public
      Python
      •0•3•0•0•Updated Oct 25, 2023Oct 25, 2023

    • SpeckleDynamicsModelFitting

      Public
      MATLAB
      •1•1•0•0•Updated Oct 12, 2023Oct 12, 2023

    • SerialSectOCT

      Public
      C
      •1•2•0•0•Updated Aug 5, 2023Aug 5, 2023

    • 2023-SCOS

      Public
      Communications Biology 2023 - Measuring human cerebral blood flow and brain function with fiber-based speckle contrast optical spectroscopy system
      MATLAB
      •0•0•0•0•Updated Aug 1, 2023Aug 1, 2023

    • Annotation_tools

      Public
      MATLAB applications for myelin and cell annotation of qBRM and 2P images
      MATLAB
      •0•1•0•0•Updated Jun 5, 2023Jun 5, 2023

    • HomerPy

      Public
      Python
      •1•0•0•0•Updated Apr 11, 2023Apr 11, 2023

    • NeurovascularCouplingStroke

      Public
      MATLAB
      •0•0•0•0•Updated Mar 10, 2023Mar 10, 2023

    • capStall

      Public
      MATLAB
      •0•0•1•0•Updated Nov 21, 2022Nov 21, 2022

    • DynamicSpeckleModel

      Public
      MATLAB
      •2•3•0•0•Updated Jul 25, 2022Jul 25, 2022

    • BIDS-NIRS-Tapping

      Public
      Example fNIRS BIDS dataset created by Rob Luke
      4•0•0•0•Updated May 12, 2022May 12, 2022

    • bessBeamCapStall

      Public
      MATLAB
      •0•0•0•0•Updated May 12, 2022May 12, 2022

    • fNIRS-BIDS-Validator

      Public
      Python
      •0•0•0•0•Updated May 10, 2022May 10, 2022

    • PlotProbe2

      Public
      MATLAB
      •0•0•0•0•Updated Apr 27, 2022Apr 27, 2022

    • ninjaNIRS21

      Public
      VHDL
      •3•1•0•0•Updated Mar 22, 2022Mar 22, 2022

    • MonteCarloWaveModel

      Public
      C
      •1•3•0•0•Updated Dec 5, 2021Dec 5, 2021