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@BrainDynamicsUSYD Brain Dynamics Group

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    20 repositories

    • Distributed_and_dynamical_communication

      Public
      Distributed and dynamical communication
      Python
      •
      GNU General Public License v3.0
      •1•0•0•0•Updated May 10, 2024May 10, 2024

    • MarmosetCortex

      Public
      network analysis of marmoset connectivity data
      MATLAB
      •0•1•0•0•Updated Mar 20, 2024Mar 20, 2024

    • spatiotemporal-urban-model

      Public
      Model developed in the research carried out for "Spatiotemporal Dynamics of Urban Populations and Housing Markets", P. A. Robinson, A. McInnes, Somwrita Sarkar
      Python
      •1•0•0•0•Updated Dec 18, 2023Dec 18, 2023

    • BrainVortexToolbox

      Public
      MATLAB
      •5•21•0•0•Updated Jul 20, 2023Jul 20, 2023

    • SpikeNet

      Public
      A computational platform for studying spiking neural circuits developed by Dr. Pulin Gong's group at University of Sydney.
      cpphdf5simulationmatlabpbs
      MATLAB
      •
      Apache License 2.0
      •6•15•15•0•Updated Jul 18, 2023Jul 18, 2023

    • FHMC

      Public
      Fractional Neural Sampling
      MATLAB
      •1•0•0•0•Updated Aug 9, 2022Aug 9, 2022

    • NeuroFdpToolbox

      Public
      MATLAB toolbox to automatically detect, analyze and visualize spatiotemporal fractional propagating patterns in neural population activity, developed by Dr. Pulin Gong's group at University of Sydney
      MATLAB
      •
      Apache License 2.0
      •3•4•0•0•Updated Jul 23, 2022Jul 23, 2022

    • NeuroPattToolbox

      Public
      MATLAB toolbox to automatically detect, analyze and visualize spatiotemporal patterns in neural population activity, developed by Dr. Pulin Gong's group at University of Sydney
      optical-flowneuroimaging-analysisneuroscience-methods
      MATLAB
      •
      GNU General Public License v3.0
      •16•16•0•0•Updated Apr 20, 2021Apr 20, 2021

    • PoleCalc

      Public template
      MATLAB
      •0•0•0•0•Updated Mar 12, 2021Mar 12, 2021

    • SpecFac

      Public
      Matlab implementation of Wilson Spectral Factorization
      MATLAB
      •
      GNU General Public License v3.0
      •1•0•0•0•Updated Aug 17, 2020Aug 17, 2020

    • hemodynamics-layers

      Public
      MATLAB codes for simulating spatiotemporal hemodynamic responses across the cortical depth
      modelingneuroscienceneuroimagingfmrineuroscience-methods
      MATLAB
      •1•2•0•0•Updated Mar 20, 2020Mar 20, 2020

    • Project_ODOP

      Public
      Pinwheel and patchy propagator. Neural activity, convolution of BOLD response, deconvolution of BOLD, neural activity recovery.
      MATLAB
      •1•0•0•1•Updated Nov 18, 2019Nov 18, 2019

    • BrainPalimpsest

      Public
      Matlab toolbox to deconvolve BOLD-fMRI data. It produces the underlying spatiotemporal neural and hemodynamic activity
      neurosciencefmrineuroimaging-analysisneuroscience-methods
      MATLAB
      •
      Apache License 2.0
      •7•8•0•0•Updated Nov 18, 2019Nov 18, 2019

    • nftsim

      Public
      C++ library for simulation of multiscale neural field dynamics
      neuroscienceeeg-signalsbrain-imagingsimulationtheory
      C++
      •
      Apache License 2.0
      •24•30•53•0•Updated Dec 15, 2018Dec 15, 2018

    • hctsa

      Public
      Highly comparative time-series analysis code repository
      MATLAB
      •
      Other
      •317•0•0•0•Updated Jun 7, 2018Jun 7, 2018

    • braintrak

      Public
      Real-time brain states tracking system and corticothalamic neural field parameter estimation
      neuroscienceeegdata-fittingmonte-carlo-samplingbrain-activityneural-fields
      MATLAB
      •
      Other
      •5•6•6•0•Updated Apr 18, 2018Apr 18, 2018

    • visbrain

      Public
      A multi-purpose GPU-accelerated open-source suite for brain data visualization
      Python
      •
      Other
      •65•1•0•0•Updated Nov 16, 2017Nov 16, 2017

    • spikegrid

      Public
      Spiking neural circuit models developed in Dr. Pulin Gong's group at University of Sydney
      C++
      •4•1•7•0•Updated Jul 31, 2017Jul 31, 2017

    • qtop

      Public
      Simple queue status for pbs
      C
      •
      GNU General Public License v3.0
      •1•0•0•0•Updated Sep 14, 2015Sep 14, 2015

    • conda-recipes

      Public
      build and test recipes for conda
      Shell
      •
      Other
      •374•0•0•0•Updated Jul 23, 2015Jul 23, 2015