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@cancerregulome Center for Systems Analysis of the Cancer Regulome

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    20 repositories

    • PubCrawl

      Public
      PubCrawl
      JavaScript
      •1•2•10•3•Updated Jun 20, 2022Jun 20, 2022

    • multiscale-mutation-hotspots

      Public
      Multiscale Mutation Hotspots
      Python
      •
      Other
      •2•1•2•0•Updated Feb 22, 2017Feb 22, 2017

    • ProjectWebsite

      Public
      TCGA Cancer Regulome Project Informational Website
      HTML
      •
      MIT License
      •1•1•0•0•Updated Jan 5, 2017Jan 5, 2017

    • gidget

      Public
      TCGA Feature Matrix Pipeline
      Python
      •
      MIT License
      •3•6•11•0•Updated Aug 15, 2016Aug 15, 2016

    • RegulomeExplorer

      Public
      JavaScript
      •2•4•3•0•Updated Jan 7, 2016Jan 7, 2016

    • RegulomeExplorer--Deprecated

      Public
      TCGA Regulome Explorer
      JavaScript
      •2•3•21•0•Updated Dec 21, 2015Dec 21, 2015

    • docker-prototyping

      Public
      scratch space for initial virtualized infrastructure prototyping
      Ruby
      •
      MIT License
      •0•0•2•0•Updated Aug 11, 2015Aug 11, 2015

    • gidget-test-prototype

      Public
      Prototype code for testing gidget pipelines
      Java
      •
      Apache License 2.0
      •0•0•0•0•Updated Feb 25, 2015Feb 25, 2015

    • GeneSpot

      Public
      TCGA Gene-Centric Queries Web Application
      JavaScript
      •
      MIT License
      •4•1•26•0•Updated Oct 8, 2014Oct 8, 2014

    • Resort

      Public
      Clustered, sorted heatmap visualization
      JavaScript
      •
      MIT License
      •0•0•1•0•Updated Sep 21, 2014Sep 21, 2014

    • SeqPeek

      Public
      SeqPeek Visualization
      JavaScript
      •3•0•0•0•Updated Aug 20, 2014Aug 20, 2014

    • Addama

      Public
      Adaptive Data Management :: OAuth Enabled Web Services
      Python
      •
      MIT License
      •3•0•0•0•Updated Jun 17, 2014Jun 17, 2014

    • inspectra

      Public
      Inspectra is a tool for spectral comparison of graph topology.
      JavaScript
      •
      BSD 3-Clause "New" or "Revised" License
      •2•26•1•0•Updated May 7, 2014May 7, 2014

    • Ponzi

      Public
      A get (en)rich(ed) quick service for hypergeometric gene set analysis.
      Python
      •
      BSD 3-Clause "New" or "Revised" License
      •1•2•3•0•Updated May 7, 2014May 7, 2014

    • micro

      Public
      A tool for rapid discovery of interesting miRNA/protein interactions.
      JavaScript
      •
      BSD 3-Clause "New" or "Revised" License
      •4•0•1•0•Updated Feb 4, 2014Feb 4, 2014

    • ReWebsocketServer

      Public
      A simple go server to stream rf ace results to a client side visualization via web sockets.
      Go
      •1•0•6•0•Updated Dec 12, 2013Dec 12, 2013

    • bootstrap-dropdown-checkbox

      Public
      Bootstrap dropdown + multiple checkbox selection
      JavaScript
      •
      MIT License
      •12•0•0•0•Updated Dec 4, 2013Dec 4, 2013

    • GeneSpot_1.0

      Public
      [First Version] TCGA Gene-Centric Queries Web Application
      JavaScript
      •
      MIT License
      •1•1•27•2•Updated Nov 20, 2013Nov 20, 2013

    • gbmExplorer

      Public
      GBM Explorer
      Shell
      •0•0•0•0•Updated Aug 26, 2013Aug 26, 2013

    • pathway-interaction-database

      Public
      The Pathway Interaction Database (PID) is software supporting the access and display of information about bio-molecular interactions and cellular processes assembled into signaling pathways.
      Perl
      •
      Other
      •10•1•0•0•Updated Apr 26, 2013Apr 26, 2013