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    22 repositories

    • website

      Public
      Luque Lab Website
      1•0•6•0•Updated Oct 17, 2024Oct 17, 2024

    • pyCapsid

      Public
      Python package to extract quasi-rigid domains in protein shells and other macromolecular complexes.
      bioinformaticsstructural-biologyvirusesbiophysics
      HTML
      •
      MIT License
      •1•5•27•0•Updated Feb 5, 2024Feb 5, 2024

    • aurora_vogel_athena

      Public
      Python
      •0•0•4•0•Updated Dec 21, 2023Dec 21, 2023

    • dynamics

      Public
      Temporary public repository
      Jupyter Notebook
      •
      MIT License
      •0•1•14•0•Updated Nov 25, 2023Nov 25, 2023

    • AI_lab_assistant

      Public
      Interactive AI agent specialized on the Luque Lab domain knowledge
      Python
      •
      MIT License
      •0•1•0•0•Updated Oct 15, 2023Oct 15, 2023

    • GoldSim

      Public
      Python
      •0•0•0•0•Updated Aug 22, 2023Aug 22, 2023

    • Athena

      Public
      5•1•1•1•Updated Aug 11, 2023Aug 11, 2023

    • capsid-generator

      Public
      Generate and visualize capsid models.
      Python
      •0•0•0•0•Updated Aug 11, 2023Aug 11, 2023

    • HelloWorld

      Public
      Running the HelloWorld program
      Python
      •0•0•0•0•Updated Apr 19, 2023Apr 19, 2023

    • project_template

      Public template
      Python
      •
      MIT License
      •1•0•0•0•Updated Mar 15, 2023Mar 15, 2023

    • rigid_domain_subdivision

      Public
      Mechanical subdivision of viral capsids via Gaussian Network Models.
      Jupyter Notebook
      •0•0•0•0•Updated Mar 13, 2023Mar 13, 2023

    • cbrown_thesis_athena

      Public
      Athena overview for Colin Brown's Thesis.
      Python
      •0•0•0•0•Updated Dec 15, 2022Dec 15, 2022

    • Lee_etal_CSBJ_2022

      Public
      Predicting the capsid architecture of phages from metagenomic data
      Jupyter Notebook
      •1•2•1•0•Updated Apr 21, 2022Apr 21, 2022

    • VAN

      Public
      Virus Anatomy Navigator
      Jupyter Notebook
      •0•0•2•1•Updated Mar 23, 2022Mar 23, 2022

    • Cobarrubia_etal_FrontPhys_2021

      Public
      Codes and instructions to replicate the research published in Cobarrubia et al. Frontiers in Physics 2021.
      particlesstatistical-analysisphysical-modelingmucusanomalous-diffusion
      R
      •
      MIT License
      •0•0•0•0•Updated Nov 11, 2021Nov 11, 2021

    • Caitlin-Athena

      Public
      0•0•0•0•Updated Nov 10, 2021Nov 10, 2021

    • Jessica_test_repo

      Public
      Jessica's testing repo for the Athena page
      0•0•0•0•Updated Nov 5, 2021Nov 5, 2021

    • test-jtd

      Public
      Test Just-The-Docs GitHub page Jekyll theme
      MIT License
      •0•0•0•0•Updated Sep 7, 2021Sep 7, 2021

    • George_Mullinix_etal_2021

      Public
      This repository is associated with the publication George, Mullinix et al 2021. It contains the codes associated to measuring the geometrical properties of corals and assessing their association with the competitive outcomes against benthic competitors.
      competitiongeometrystatistical-learningcoral
      R
      •
      MIT License
      •0•0•0•0•Updated May 19, 2021May 19, 2021

    • small_tailed_phage_genomes

      Public
      0•0•0•0•Updated May 14, 2021May 14, 2021

    • hkcage

      Public
      pyhton bundle that extends the hkcage tool in Chimera X to incorporate multiple icosahedral lattices
      Python
      •1•1•0•0•Updated Dec 2, 2020Dec 2, 2020

    • coral-perimeter

      Public
      MATLAB
      •0•0•0•0•Updated Oct 8, 2015Oct 8, 2015