Repositories list

• ImSwitch

  Public
  ImSwitch is a software solution in Python that aims at generalizing microscope control by providing a solution for flexible control of multiple microscope modalities.

  Python

  •

  GNU General Public License v3.0

  •52•11•21•0•Updated Jan 28, 2025Jan 28, 2025

• ImSwitchDockerInstall

  Public
  This is the repository to install and launch ImSwitch in Docker

  Python

  •0•0•0•0•Updated Jan 28, 2025Jan 28, 2025

• imswitchclient

  Public
  This is a REST Client for the ImSwitch Fastapi

  Python

  •

  MIT License

  •0•1•0•0•Updated Jan 28, 2025Jan 28, 2025

• UC2-REST

  Public
  UC2 code for using the REST API with electronic modules (LED, motors, etc.)

  Python

  •

  Other

  •3•8•4•0•Updated Jan 27, 2025Jan 27, 2025

• openUC2.github.io

  Public
  Wiki pages for the openUC2 system based on Docusaurus

  HTML

  •

  MIT License

  •5•0•0•0•Updated Jan 25, 2025Jan 25, 2025

• openODMR

  Public
  Open-source ODMR driver

  Prolog

  •1•2•0•0•Updated Jan 20, 2025Jan 20, 2025

• openUC2-LaserScanner

  Public
  C

  •

  MIT License

  •20•0•0•0•Updated Jan 17, 2025Jan 17, 2025

• ImSwitchConfig

  Public
  Jupyter Notebook

  •2•3•5•0•Updated Dec 20, 2024Dec 20, 2024

• openUC2-Safety-Docs

  Public
  This hosts all the safety-related documents for producing UC2 parts

  0•0•0•0•Updated Dec 17, 2024Dec 17, 2024

• ImSwitchWorkflowManager

  Public
  Experimental Workflow Manager for Most Microscopy Experiments

  Python

  •

  GNU General Public License v3.0

  •0•0•0•0•Updated Dec 10, 2024Dec 10, 2024

• UC2-GIT

  Public
  Respository for Open-Science modular microscope system.

  pythonraspberry-pidiy+ 3printing-3dincubatormicroscope

  Jupyter Notebook

  •

  Other

  •70•472•42•1•Updated Dec 7, 2024Dec 7, 2024

• react-file-manager

  Public
  An open-source React.js package for seamless file manager integration, offering a user-friendly interface for viewing, uploading, and deleting files with full UI and backend support.

  JavaScript

  •

  MIT License

  •19•0•0•0•Updated Dec 6, 2024Dec 6, 2024

• imswitch-arkitekt-next

  Public
  Plugin to implement Arkitekt-Next as a standalone Client

  Python

  •

  MIT License

  •0•0•1•0•Updated Dec 3, 2024Dec 3, 2024

• ImStitch

  Public
  An Arkitekt app to stitch images

  Python

  •1•0•0•0•Updated Nov 19, 2024Nov 19, 2024

• ashlarUC2

  Public
  ASHLAR: Alignment by Simultaneous Harmonization of Layer/Adjacency Registration

  Python

  •

  MIT License

  •43•0•0•0•Updated Nov 18, 2024Nov 18, 2024

• openUC2-OT2-PlateGripper

  Public
  Gripper for th eopentrons

  0•3•0•0•Updated Nov 14, 2024Nov 14, 2024

• UC2Serial

  Public
  This is an Android APP that can control the UC2 Boards via USB Serial

  Java

  •0•0•0•0•Updated Nov 4, 2024Nov 4, 2024

• cubelab

  Public
  Our 3D parts repository for modular optics and beyond.

  Ruby

  •

  MIT License

  •59•1•0•0•Updated Nov 2, 2024Nov 2, 2024

• openUc2MicroManagerDeviceAdapter

  Public
  This is an attempt to use the openUC2 board inside micromanager

  C++

  •0•0•0•0•Updated Oct 28, 2024Oct 28, 2024

• micro-manager

  Public
  Microscope control and image acquisition integrated with ImageJ

  Java

  •232•0•0•0•Updated Oct 24, 2024Oct 24, 2024

• imswitch-pi-gen

  Public
  Shell

  •0•0•2•0•Updated Oct 24, 2024Oct 24, 2024

• openUC2_SOOP

  Public
  Other

  •0•0•15•0•Updated Sep 24, 2024Sep 24, 2024

• openUC2-Lightsheet

  Public
  This is the openUC2 light-sheet system.

  0•1•0•0•Updated Aug 16, 2024Aug 16, 2024

• openUC2-ESP32InfoScreen

  Public
  C

  •1•0•0•0•Updated Jul 11, 2024Jul 11, 2024

• ImTools

  Public
  A random selection of tools useful for ImSwitch, Testing and Debugging

  Python

  •0•0•0•0•Updated Jul 3, 2024Jul 3, 2024

• imswitch-arkitekt

  Public
  This imswitch plugin will add arkitekt support to imswitch

  Python

  •

  MIT License

  •0•0•0•0•Updated Jun 19, 2024Jun 19, 2024

• ut2_module

  Public
  Python

  •

  MIT License

  •0•0•0•0•Updated Jun 16, 2024Jun 16, 2024

• openUC2_MicROScopy

  Public
  This is a collection of files that will be used to integrate openUC2 into ROS2

  Python

  •0•0•0•0•Updated May 9, 2024May 9, 2024

• ImSwitchInstaller

  Public
  An electron-based installer for ImSwitch

  Python

  •

  MIT License

  •2•0•9•0•Updated May 6, 2024May 6, 2024

• ImSwitchNode-Planktoscope

  Public
  This is a copy of the Planktoscope Node Red GUI/Dashboard that works with ImSwitch (fastapi)

  GNU General Public License v3.0

  •0•0•0•0•Updated May 1, 2024May 1, 2024