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@reconstrue Reconstrue

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    16 repositories

    • public_website

      Public
      Source for the public corporate website
      JavaScript
      •
      MIT License
      •0•0•11•2•Updated Jun 10, 2023Jun 10, 2023

    • cuboids

      Public
      Cloud-native neuroscientific volumetric cuboids processed over HTTP
      Apache License 2.0
      •0•0•41•4•Updated Dec 7, 2022Dec 7, 2022

    • brightfield

      Public
      Reconstruction of biocytin-stained neurons detected in brightfield microscopy image stacks
      neurosciencereconstructionmicroscopy
      Jupyter Notebook
      •
      Apache License 2.0
      •1•2•206•4•Updated Oct 6, 2022Oct 6, 2022

    • boss-manage

      Public
      Repo for Boss configuration and management software
      Python
      •
      Apache License 2.0
      •6•0•0•0•Updated Nov 12, 2020Nov 12, 2020

    • fieldnotes

      Public
      Observations of neuroscientific codings. The handbook for the Reconstrue stack.
      Jupyter Notebook
      •
      Apache License 2.0
      •0•0•5•0•Updated Oct 14, 2020Oct 14, 2020

    • cubee

      Public
      Neurospace navigator. The client for Reconstrue Cuboids, as well as other volumetric spatial databases.
      JavaScript
      •
      Apache License 2.0
      •0•0•6•0•Updated Sep 9, 2020Sep 9, 2020

    • orgcss

      Public
      Simple and clean CSS for Org-exported HTML
      CSS
      •
      Other
      •76•0•0•0•Updated Aug 25, 2020Aug 25, 2020

    • presentations

      Public
      Public presentations given by Reconstrue
      0•0•1•0•Updated Aug 14, 2020Aug 14, 2020

    • darwin_machines

      Public
      A one-pager on Calvin's Darwin Machine Theory
      whole-enchilada
      Apache License 2.0
      •0•0•2•0•Updated Aug 9, 2020Aug 9, 2020

    • shell

      Public
      Jupyter as developer's IDE & CLI shell atop web-tech. Tested for multiple deploys (JupyterHub, Colab, etc.).
      Jupyter Notebook
      •
      Apache License 2.0
      •0•0•54•0•Updated Jun 22, 2020Jun 22, 2020

    • cajal

      Public
      Restoration of Santiago Ramón y Cajal drawings
      0•0•1•0•Updated Jun 16, 2020Jun 16, 2020

    • single_cell

      Public
      Single cell analysis tools built to run on Jupyter, especially Colab
      Jupyter Notebook
      •
      Apache License 2.0
      •0•1•84•0•Updated Apr 19, 2020Apr 19, 2020

    • AllenSDK

      Public
      code for reading and processing Allen Institute for Brain Science data
      Jupyter Notebook
      •
      Other
      •149•0•0•0•Updated Apr 8, 2020Apr 8, 2020

    • neuroglancer

      Public
      WebGL-based viewer for volumetric data
      TypeScript
      •
      Apache License 2.0
      •295•0•0•0•Updated Feb 25, 2020Feb 25, 2020

    • ffn

      Public
      Flood-Filling Networks for instance segmentation in 3d volumes.
      Python
      •
      Apache License 2.0
      •99•0•0•0•Updated Feb 11, 2020Feb 11, 2020

    • illiberally_licensed_code

      Public
      Illiberally licensed (GPL, non-commercial, etc.) codebases tweaked a bit by Reconstrue, and then dropped for being philosophically incompatible WRT licensing
      Jupyter Notebook
      •0•0•1•0•Updated Nov 25, 2019Nov 25, 2019