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    46 repositories

    • CeleScope

      Public
      Single Cell Analysis Pipelines
      single-cell-analysisbioinformatics
      Python
      •
      MIT License
      •32•97•26•0•Updated Feb 12, 2025Feb 12, 2025

    • CeleScope_ATAC

      Public
      Single Cell ATAC-Seq Analysis Pipelines
      Python
      •
      MIT License
      •1•1•2•0•Updated Feb 11, 2025Feb 11, 2025

    • sccore

      Public
      Single cell core
      Python
      •0•0•0•0•Updated Feb 11, 2025Feb 11, 2025

    • scsnp

      Public
      Nextflow
      •
      MIT License
      •0•0•0•0•Updated Feb 10, 2025Feb 10, 2025

    • Dna-seq_Analysis

      Public
      Python
      •0•3•2•0•Updated Jan 14, 2025Jan 14, 2025

    • scdynascope

      Public
      Python
      •
      MIT License
      •0•0•0•0•Updated Dec 23, 2024Dec 23, 2024

    • accurascoperna

      Public
      AccuraSCOPE RNA
      Nextflow
      •
      MIT License
      •0•0•1•0•Updated Dec 17, 2024Dec 17, 2024

    • sccite

      Public
      single cell CITE-Seq
      Nextflow
      •
      MIT License
      •0•0•0•0•Updated Nov 22, 2024Nov 22, 2024

    • celescope_test_script

      Public
      scripts for test data
      Shell
      •4•1•0•2•Updated Oct 25, 2024Oct 25, 2024

    • AccuraCode

      Public
      AccuraCode® analysis pipeline
      Python
      •
      MIT License
      •4•2•3•1•Updated Sep 24, 2024Sep 24, 2024

    • scrna

      Public
      Pipeline for Single-cell RNA Seq
      Python
      •
      MIT License
      •5•0•3•0•Updated Sep 5, 2024Sep 5, 2024

    • bulk_dynaseq_test_data

      Public
      0•0•0•0•Updated Sep 2, 2024Sep 2, 2024

    • bulk_rna_test_data

      Public
      0•0•0•0•Updated Aug 27, 2024Aug 27, 2024

    • scdynascope_test_data

      Public
      0•0•0•0•Updated Aug 14, 2024Aug 14, 2024

    • wf-single-cell

      Public
      Python
      •
      Other
      •41•0•0•1•Updated Aug 7, 2024Aug 7, 2024

    • sctag_test_data

      Public
      MIT License
      •0•0•0•0•Updated Jul 29, 2024Jul 29, 2024

    • scpacbio

      Public
      Nextflow
      •
      MIT License
      •0•0•0•0•Updated Jul 15, 2024Jul 15, 2024

    • nf-celescope

      Public
      A collection of nextflow pipelines to process sequencing data generated by Singleron kits.
      1•1•0•0•Updated Jul 10, 2024Jul 10, 2024

    • scpacbio_test_data

      Public
      0•0•0•0•Updated Jul 8, 2024Jul 8, 2024

    • rnaseq

      Public
      Nextflow
      •
      MIT License
      •0•0•0•0•Updated Jul 4, 2024Jul 4, 2024

    • rnaseq_test_data

      Public
      test data for AccuraSCOPE RNA
      0•0•0•0•Updated Jun 28, 2024Jun 28, 2024

    • test_genome

      Public
      genome files for test
      0•0•0•0•Updated Jun 28, 2024Jun 28, 2024

    • scflvdj

      Public
      Python
      •
      MIT License
      •0•0•0•0•Updated Jun 28, 2024Jun 28, 2024

    • sccite_full_result

      Public
      single cell CITE-Seq results
      HTML
      •0•0•0•0•Updated Jun 24, 2024Jun 24, 2024

    • sccite_test_data

      Public
      0•0•0•0•Updated Jun 20, 2024Jun 20, 2024

    • scatac

      Public
      Python
      •
      MIT License
      •1•0•0•0•Updated Jun 13, 2024Jun 13, 2024

    • scatac_test_data

      Public
      scatac test data
      0•0•0•0•Updated Jun 13, 2024Jun 13, 2024

    • scrna_test_data

      Public
      single cell RNA test data of GEXSCOPE
      0•0•0•0•Updated Jun 12, 2024Jun 12, 2024

    • scflvdj_test_data

      Public
      0•0•0•0•Updated Jun 4, 2024Jun 4, 2024

    • scflv_test_data

      Public
      MIT License
      •0•0•0•0•Updated May 27, 2024May 27, 2024