TST/PKG: Removed pandas.util.testing.slow definition (#16852)

Author: TomAugspurger

doc/source/whatsnew/v0.21.0.txt

@@ -101,6 +101,7 @@ the target. Now, a ``ValueError`` will be raised when such an input is passed in
 - :class:`pandas.HDFStore`'s string representation is now faster and less detailed. For the previous behavior, use ``pandas.HDFStore.info()``. (:issue:`16503`).
 - Compression defaults in HDF stores now follow pytable standards. Default is no compression and if ``complib`` is missing and ``complevel`` > 0 ``zlib`` is used (:issue:`15943`)
 - ``Index.get_indexer_non_unique()`` now returns a ndarray indexer rather than an ``Index``; this is consistent with ``Index.get_indexer()`` (:issue:`16819`)
+- Removed the ``@slow`` decorator from ``pandas.util.testing``, which caused issues for some downstream packages' test suites. Use ``@pytest.mark.slow`` instead, which achieves the same thing (:issue:`16850`)
 
 .. _whatsnew_0210.api:
 

pandas/tests/computation/test_eval.py

@@ -30,7 +30,7 @@
 import pandas.util.testing as tm
 from pandas.util.testing import (assert_frame_equal, randbool,
                                  assert_numpy_array_equal, assert_series_equal,
-                                 assert_produces_warning, slow)
+                                 assert_produces_warning)
 from pandas.compat import PY3, reduce
 
 _series_frame_incompatible = _bool_ops_syms
@@ -144,7 +144,7 @@ def teardown_method(self, method):
         del self.lhses, self.rhses, self.scalar_rhses, self.scalar_lhses
         del self.pandas_rhses, self.pandas_lhses, self.current_engines
 
-    @slow
+    @pytest.mark.slow
     def test_complex_cmp_ops(self):
         cmp_ops = ('!=', '==', '<=', '>=', '<', '>')
         cmp2_ops = ('>', '<')
@@ -161,7 +161,7 @@ def test_simple_cmp_ops(self):
         for lhs, rhs, cmp_op in product(bool_lhses, bool_rhses, self.cmp_ops):
             self.check_simple_cmp_op(lhs, cmp_op, rhs)
 
-    @slow
+    @pytest.mark.slow
     def test_binary_arith_ops(self):
         for lhs, op, rhs in product(self.lhses, self.arith_ops, self.rhses):
             self.check_binary_arith_op(lhs, op, rhs)
@@ -181,17 +181,17 @@ def test_pow(self):
         for lhs, rhs in product(self.lhses, self.rhses):
             self.check_pow(lhs, '**', rhs)
 
-    @slow
+    @pytest.mark.slow
     def test_single_invert_op(self):
         for lhs, op, rhs in product(self.lhses, self.cmp_ops, self.rhses):
             self.check_single_invert_op(lhs, op, rhs)
 
-    @slow
+    @pytest.mark.slow
     def test_compound_invert_op(self):
         for lhs, op, rhs in product(self.lhses, self.cmp_ops, self.rhses):
             self.check_compound_invert_op(lhs, op, rhs)
 
-    @slow
+    @pytest.mark.slow
     def test_chained_cmp_op(self):
         mids = self.lhses
         cmp_ops = '<', '>'
@@ -870,7 +870,7 @@ def test_frame_comparison(self, engine, parser):
             res = pd.eval('df < df3', engine=engine, parser=parser)
             assert_frame_equal(res, df < df3)
 
-    @slow
+    @pytest.mark.slow
     def test_medium_complex_frame_alignment(self, engine, parser):
         args = product(self.lhs_index_types, self.index_types,
                        self.index_types, self.index_types)
@@ -974,7 +974,7 @@ def test_series_frame_commutativity(self, engine, parser):
                     if engine == 'numexpr':
                         assert_frame_equal(a, b)
 
-    @slow
+    @pytest.mark.slow
     def test_complex_series_frame_alignment(self, engine, parser):
         import random
         args = product(self.lhs_index_types, self.index_types,

pandas/tests/frame/test_repr_info.py

@@ -8,6 +8,7 @@
 
 from numpy import nan
 import numpy as np
+import pytest
 
 from pandas import (DataFrame, compat, option_context)
 from pandas.compat import StringIO, lrange, u
@@ -40,7 +41,7 @@ def test_repr_mixed(self):
         foo = repr(self.mixed_frame)  # noqa
         self.mixed_frame.info(verbose=False, buf=buf)
 
-    @tm.slow
+    @pytest.mark.slow
     def test_repr_mixed_big(self):
         # big mixed
         biggie = DataFrame({'A': np.random.randn(200),
@@ -87,7 +88,7 @@ def test_repr_dimensions(self):
         with option_context('display.show_dimensions', 'truncate'):
             assert "2 rows x 2 columns" not in repr(df)
 
-    @tm.slow
+    @pytest.mark.slow
     def test_repr_big(self):
         # big one
         biggie = DataFrame(np.zeros((200, 4)), columns=lrange(4),

pandas/tests/frame/test_to_csv.py

@@ -17,7 +17,7 @@
 from pandas.util.testing import (assert_almost_equal,
                                  assert_series_equal,
                                  assert_frame_equal,
-                                 ensure_clean, slow,
+                                 ensure_clean,
                                  makeCustomDataframe as mkdf)
 import pandas.util.testing as tm
 
@@ -205,7 +205,7 @@ def _check_df(df, cols=None):
         cols = ['b', 'a']
         _check_df(df, cols)
 
-    @slow
+    @pytest.mark.slow
     def test_to_csv_dtnat(self):
         # GH3437
         from pandas import NaT
@@ -236,7 +236,7 @@ def make_dtnat_arr(n, nnat=None):
             assert_frame_equal(df, recons, check_names=False,
                                check_less_precise=True)
 
-    @slow
+    @pytest.mark.slow
     def test_to_csv_moar(self):
 
         def _do_test(df, r_dtype=None, c_dtype=None,
@@ -728,7 +728,7 @@ def test_to_csv_chunking(self):
                 rs = read_csv(filename, index_col=0)
                 assert_frame_equal(rs, aa)
 
-    @slow
+    @pytest.mark.slow
     def test_to_csv_wide_frame_formatting(self):
         # Issue #8621
         df = DataFrame(np.random.randn(1, 100010), columns=None, index=None)

pandas/tests/indexing/test_indexing_slow.py

@@ -6,11 +6,12 @@
 import pandas as pd
 from pandas.core.api import Series, DataFrame, MultiIndex
 import pandas.util.testing as tm
+import pytest
 
 
 class TestIndexingSlow(object):
 
-    @tm.slow
+    @pytest.mark.slow
     def test_multiindex_get_loc(self):  # GH7724, GH2646
 
         with warnings.catch_warnings(record=True):
@@ -80,15 +81,15 @@ def loop(mi, df, keys):
                     assert not mi.index.lexsort_depth < i
                     loop(mi, df, keys)
 
-    @tm.slow
+    @pytest.mark.slow
     def test_large_dataframe_indexing(self):
         # GH10692
         result = DataFrame({'x': range(10 ** 6)}, dtype='int64')
         result.loc[len(result)] = len(result) + 1
         expected = DataFrame({'x': range(10 ** 6 + 1)}, dtype='int64')
         tm.assert_frame_equal(result, expected)
 
-    @tm.slow
+    @pytest.mark.slow
     def test_large_mi_dataframe_indexing(self):
         # GH10645
         result = MultiIndex.from_arrays([range(10 ** 6), range(10 ** 6)])

pandas/tests/io/parser/common.py

@@ -664,7 +664,7 @@ def test_url(self):
         tm.assert_frame_equal(url_table, local_table)
         # TODO: ftp testing
 
-    @tm.slow
+    @pytest.mark.slow
     def test_file(self):
         dirpath = tm.get_data_path()
         localtable = os.path.join(dirpath, 'salaries.csv')

pandas/tests/io/test_excel.py

@@ -614,7 +614,7 @@ def test_read_from_s3_url(self):
         local_table = self.get_exceldf('test1')
         tm.assert_frame_equal(url_table, local_table)
 
-    @tm.slow
+    @pytest.mark.slow
     def test_read_from_file_url(self):
 
         # FILE

pandas/tests/io/test_html.py

@@ -130,7 +130,7 @@ def test_spam_url(self):
 
         assert_framelist_equal(df1, df2)
 
-    @tm.slow
+    @pytest.mark.slow
     def test_banklist(self):
         df1 = self.read_html(self.banklist_data, '.*Florida.*',
                              attrs={'id': 'table'})
@@ -292,7 +292,7 @@ def test_invalid_url(self):
         except ValueError as e:
             assert str(e) == 'No tables found'
 
-    @tm.slow
+    @pytest.mark.slow
     def test_file_url(self):
         url = self.banklist_data
         dfs = self.read_html(file_path_to_url(url), 'First',
@@ -301,7 +301,7 @@ def test_file_url(self):
         for df in dfs:
             assert isinstance(df, DataFrame)
 
-    @tm.slow
+    @pytest.mark.slow
     def test_invalid_table_attrs(self):
         url = self.banklist_data
         with tm.assert_raises_regex(ValueError, 'No tables found'):
@@ -312,39 +312,39 @@ def _bank_data(self, *args, **kwargs):
         return self.read_html(self.banklist_data, 'Metcalf',
                               attrs={'id': 'table'}, *args, **kwargs)
 
-    @tm.slow
+    @pytest.mark.slow
     def test_multiindex_header(self):
         df = self._bank_data(header=[0, 1])[0]
         assert isinstance(df.columns, MultiIndex)
 
-    @tm.slow
+    @pytest.mark.slow
     def test_multiindex_index(self):
         df = self._bank_data(index_col=[0, 1])[0]
         assert isinstance(df.index, MultiIndex)
 
-    @tm.slow
+    @pytest.mark.slow
     def test_multiindex_header_index(self):
         df = self._bank_data(header=[0, 1], index_col=[0, 1])[0]
         assert isinstance(df.columns, MultiIndex)
         assert isinstance(df.index, MultiIndex)
 
-    @tm.slow
+    @pytest.mark.slow
     def test_multiindex_header_skiprows_tuples(self):
         df = self._bank_data(header=[0, 1], skiprows=1, tupleize_cols=True)[0]
         assert isinstance(df.columns, Index)
 
-    @tm.slow
+    @pytest.mark.slow
     def test_multiindex_header_skiprows(self):
         df = self._bank_data(header=[0, 1], skiprows=1)[0]
         assert isinstance(df.columns, MultiIndex)
 
-    @tm.slow
+    @pytest.mark.slow
     def test_multiindex_header_index_skiprows(self):
         df = self._bank_data(header=[0, 1], index_col=[0, 1], skiprows=1)[0]
         assert isinstance(df.index, MultiIndex)
         assert isinstance(df.columns, MultiIndex)
 
-    @tm.slow
+    @pytest.mark.slow
     def test_regex_idempotency(self):
         url = self.banklist_data
         dfs = self.read_html(file_path_to_url(url),
@@ -372,7 +372,7 @@ def test_python_docs_table(self):
         zz = [df.iloc[0, 0][0:4] for df in dfs]
         assert sorted(zz) == sorted(['Repo', 'What'])
 
-    @tm.slow
+    @pytest.mark.slow
     def test_thousands_macau_stats(self):
         all_non_nan_table_index = -2
         macau_data = os.path.join(DATA_PATH, 'macau.html')
@@ -382,7 +382,7 @@ def test_thousands_macau_stats(self):
 
         assert not any(s.isnull().any() for _, s in df.iteritems())
 
-    @tm.slow
+    @pytest.mark.slow
     def test_thousands_macau_index_col(self):
         all_non_nan_table_index = -2
         macau_data = os.path.join(DATA_PATH, 'macau.html')
@@ -523,7 +523,7 @@ def test_nyse_wsj_commas_table(self):
         assert df.shape[0] == nrows
         tm.assert_index_equal(df.columns, columns)
 
-    @tm.slow
+    @pytest.mark.slow
     def test_banklist_header(self):
         from pandas.io.html import _remove_whitespace
 
@@ -562,7 +562,7 @@ def try_remove_ws(x):
                                                              coerce=True)
         tm.assert_frame_equal(converted, gtnew)
 
-    @tm.slow
+    @pytest.mark.slow
     def test_gold_canyon(self):
         gc = 'Gold Canyon'
         with open(self.banklist_data, 'r') as f:
@@ -855,7 +855,7 @@ def test_works_on_valid_markup(self):
         assert isinstance(dfs, list)
         assert isinstance(dfs[0], DataFrame)
 
-    @tm.slow
+    @pytest.mark.slow
     def test_fallback_success(self):
         _skip_if_none_of(('bs4', 'html5lib'))
         banklist_data = os.path.join(DATA_PATH, 'banklist.html')
@@ -898,7 +898,7 @@ def get_elements_from_file(url, element='table'):
     return soup.find_all(element)
 
 
-@tm.slow
+@pytest.mark.slow
 def test_bs4_finds_tables():
     filepath = os.path.join(DATA_PATH, "spam.html")
     with warnings.catch_warnings():
@@ -913,13 +913,13 @@ def get_lxml_elements(url, element):
     return doc.xpath('.//{0}'.format(element))
 
 
-@tm.slow
+@pytest.mark.slow
 def test_lxml_finds_tables():
     filepath = os.path.join(DATA_PATH, "spam.html")
     assert get_lxml_elements(filepath, 'table')
 
 
-@tm.slow
+@pytest.mark.slow
 def test_lxml_finds_tbody():
     filepath = os.path.join(DATA_PATH, "spam.html")
     assert get_lxml_elements(filepath, 'tbody')