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Dear Shatterseek team,
I would like to ask if Shatterseek can be used on other references. In principles, all statistical tests seem portable. However, I see that for some criteria (e.g. the chromosomal enrichment of breakpoints) you also correct for genome-specific features like mappability. And of course, the only chromosomes supported are 1-22,X.
Can one try to tweak it to make it work on other reference genomes other than humans, for example tweaking chromosome names?
Thanks!
The text was updated successfully, but these errors were encountered:
Dear Shatterseek team,
I would like to ask if Shatterseek can be used on other references. In principles, all statistical tests seem portable. However, I see that for some criteria (e.g. the chromosomal enrichment of breakpoints) you also correct for genome-specific features like mappability. And of course, the only chromosomes supported are 1-22,X.
Can one try to tweak it to make it work on other reference genomes other than humans, for example tweaking chromosome names?
Thanks!
The text was updated successfully, but these errors were encountered: