environment.yml

channels:
  - conda-forge
  - bioconda
dependencies:
  - python==3.11.10
  - cython==3.0.10
  - pillow==10.3.0
  - pypubsub==4.0.3
  - h5py==3.11.0
  - imageio==2.34.2
  - nibabel==5.2.1
  - numpy==1.26.4
  - psutil==6.0.0
  - pyserial==3.5
  - requests==2.32.3
  - scipy==1.14.0
  - vtk==9.3.0
  - mido==1.2.10
  - nest-asyncio==1.6.0
  - pip
  - pip:
    - matplotlib==3.9.0
    - aioconsole==0.7.1
    - opencv-python==4.10.0.84
    - python-gdcm==3.0.24
    - python-rtmidi==1.5.8
    - python-socketio[client]==5.11.3
    - pyacvd==0.2.11
    - pyclaron
    - polhemusFT
    - polhemus
    - pypolaris==0.0.7
    - scikit-image==0.24.0
    - scikit-learn==1.5.0
    - torch==2.3.1
    - Trekker==0.9
    - uvicorn[standard]==0.30.1
    - wxPython==4.2.1
    - mypy==1.10.1
    - ruff~=0.5.0
    - pre-commit~=3.7.1