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Blobs don't exist #561

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Posmani opened this issue Sep 9, 2024 · 2 comments
Open

Blobs don't exist #561

Posmani opened this issue Sep 9, 2024 · 2 comments

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@Posmani
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Posmani commented Sep 9, 2024

Describe the issue
A clear and concise description of what the issue is.
We are trying to download the databases for SNPEFF but the website is down:

To Reproduce

wget https://snpeff.blob.core.windows.net/databases/test_cases.tgz
--2024-09-09 13:47:27-- https://snpeff.blob.core.windows.net/databases/test_cases.tgz
Resolving snpeff.blob.core.windows.net (snpeff.blob.core.windows.net)... 52.239.234.228
Connecting to snpeff.blob.core.windows.net (snpeff.blob.core.windows.net)|52.239.234.228|:443... connected.
HTTP request sent, awaiting response... 404 The specified blob does not exist.
2024-09-09 13:47:31 ERROR 404: The specified blob does not exist..

FATAL ERROR: Failed to download database from [https://snpeff.blob.core.windows.net/databases/v5_2/snpEff_v5_2_EquCab3.0.99.zip, https://snpeff.blob.core.windows.net/databases/v5_0/snpEff_v5_0_EquCab3.0.99.zip, https://snpeff.blob.core.windows.net/databases/v5_1/snpEff_v5_1_EquCab3.0.99.zip]

  1. SnpEff version: snpeff/5.2c

    1. Genome version:EquCab3.0.99
  2. SnpEff full command line:
    $ java -jar $SNPEFF_ROOT/snpEff.jar download -dataDir $SNPEFF_DATA EquCab3.0.99

  3. Output / Error message: Please include detailed infomration, such as transcript ID, VCF line output, etc.

FATAL ERROR: Failed to download database from [https://snpeff.blob.core.windows.net/databases/v5_2/snpEff_v5_2_EquCab3.0.99.zip, https://snpeff.blob.core.windows.net/databases/v5_0/snpEff_v5_0_EquCab3.0.99.zip, https://snpeff.blob.core.windows.net/databases/v5_1/snpEff_v5_1_EquCab3.0.99.zip]

@agalcaraz1
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Has there been any resolution to this? I'm also trying to download a database/run snpeff

00:00:00 SnpEff version SnpEff 5.2e (build 2024-10-04 18:09), by Pablo Cingolani
00:00:00 Command: 'eff'
00:00:00 Reading configuration file 'snpEff.config'. Genome: 'rn6'
00:00:00 Looking for config file: '/Users/myuser/snpEff.config'
00:00:00 Reading config file: /Users/myuser/snpEff/snpEff.config
00:00:00 done
00:00:00 Reading database for genome version 'rn6' from file '/Users/myuser/snpEff/./data/rn6/snpEffectPredictor.bin' (this might take a while)
00:00:00 Database not installed
Attempting to download and install database 'rn6'
00:00:00 Reading configuration file 'snpEff.config'. Genome: 'rn6'
00:00:00 Looking for config file: '/Users/myuser/snpEff.config'
00:00:00 Reading config file: /Users/myuser/snpEff/snpEff.config
00:00:00 done
00:00:00 Downloading database for 'rn6'
00:00:00 Downloading from 'https://snpeff.blob.core.windows.net/databases/v5_2/snpEff_v5_2_rn6.zip' to local file '/var/folders/bz/mtp_mcbd5831p4ww2m8gvhs40000gn/T//snpEff_v5_2_rn6.zip'
00:00:00 Connecting to https://snpeff.blob.core.windows.net/databases/v5_2/snpEff_v5_2_rn6.zip
00:00:00 Connecting to https://snpeff.blob.core.windows.net/databases/v5_2/snpEff_v5_2_rn6.zip, using proxy: false
00:00:01 ERROR while connecting to https://snpeff.blob.core.windows.net/databases/v5_2/snpEff_v5_2_rn6.zip
00:00:01 Downloading from 'https://snpeff.blob.core.windows.net/databases/v5_0/snpEff_v5_0_rn6.zip' to local file '/var/folders/bz/mtp_mcbd5831p4ww2m8gvhs40000gn/T//snpEff_v5_0_rn6.zip'
00:00:01 Connecting to https://snpeff.blob.core.windows.net/databases/v5_0/snpEff_v5_0_rn6.zip
00:00:01 Connecting to https://snpeff.blob.core.windows.net/databases/v5_0/snpEff_v5_0_rn6.zip, using proxy: false
00:00:01 ERROR while connecting to https://snpeff.blob.core.windows.net/databases/v5_0/snpEff_v5_0_rn6.zip
00:00:01 Downloading from 'https://snpeff.blob.core.windows.net/databases/v5_1/snpEff_v5_1_rn6.zip' to local file '/var/folders/bz/mtp_mcbd5831p4ww2m8gvhs40000gn/T//snpEff_v5_1_rn6.zip'
00:00:01 Connecting to https://snpeff.blob.core.windows.net/databases/v5_1/snpEff_v5_1_rn6.zip
00:00:01 Connecting to https://snpeff.blob.core.windows.net/databases/v5_1/snpEff_v5_1_rn6.zip, using proxy: false
00:00:01 ERROR while connecting to https://snpeff.blob.core.windows.net/databases/v5_1/snpEff_v5_1_rn6.zip
FATAL ERROR: Failed to download database from [https://snpeff.blob.core.windows.net/databases/v5_2/snpEff_v5_2_rn6.zip, https://snpeff.blob.core.windows.net/databases/v5_0/snpEff_v5_0_rn6.zip, https://snpeff.blob.core.windows.net/databases/v5_1/snpEff_v5_1_rn6.zip]

@genostack
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same issues

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