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setup.py
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setup.py
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# -*- coding: utf-8 -*-
from setuptools import find_packages, setup
from refseq_masher import __version__, program_name, program_desc
classifiers = """
Development Status :: 3 - Alpha
Environment :: Console
License :: OSI Approved :: GNU General Public License v3 or later (GPLv3+)
Intended Audience :: Science/Research
Topic :: Scientific/Engineering
Topic :: Scientific/Engineering :: Bio-Informatics
Programming Language :: Python :: 3.5
Programming Language :: Python :: 3.6
Programming Language :: Python :: Implementation :: CPython
Operating System :: POSIX :: Linux
""".strip().split('\n')
def get_long_description():
import codecs
with codecs.open('README.md', encoding='UTF-8') as f:
return f.read()
setup(
name=program_name,
version=__version__,
packages=find_packages(exclude=['tests']),
url='https://github.com/phac-nml/{}'.format(program_name),
license='Apache v2.0',
author='Peter Kruczkiewicz',
author_email='peter.kruczkiewicz@gmail.com',
description=program_desc,
long_description=get_long_description(),
long_description_content_type='text/markdown',
keywords='Mash MinHash RefSeq Taxonomic Classification Containment Sequencing',
classifiers=classifiers,
package_dir={program_name: program_name},
package_data={program_name: ['data/*.msh', 'data/*.csv']},
install_requires=[
'numpy>=1.12.1',
'pandas>=0.20.1',
'click',
],
extras_require={
'test': ['pytest>=3.0.7',],
},
entry_points={
'console_scripts': [
'{0}={0}.cli:cli'.format(program_name),
],
}
)