v0.1.5

• seq_traits_impl::char_type is now unsigned char
• seq_traits_impl::max_kmer_length is now 12 (due to static memory accesses of size ~4**k)
• Added phylo_kmer_db::hash_function
• phylo_kmer_db::branch_type is now uint32_t

v0.1.4

• Added phylo_kmer_db::omega (score threshold parameter)
• Updated serialization
• Updated examples
• Updated tests

v0.1.3

• seq_traits::key_type now is uint32_t
• phylo_kmer_db now does not check the values pass to insert in the db. The old put() method replaced by insert()
• Now rappas::core can be compiled against different hash map implementations (see CMakeLists files)
• Now phylo_kmer_db contains a newick-formatted original tree. Added the tree() method
• Added phylo_tree.h (moved from rappas-build)
• Added newick.h (load_newick, parse_newick, to_newick in rappas::io)
• Reimplemented core::phylo_tree. Now it also contains pre-/post-order node ids and fast search by node id (get_by_preorder_id, get_by_postorder_id)
• Added utils/ (part of rappas::io namespace)
• A lot of other small changes
• Updated examples
• Updated tests

v0.1.2

• core::encode_kmers and core::to_kmers now support gaps and N's
• core::phylo_kmer_db now has kmer_size()
• Updated examples
• Added tests
• Added changelog

v0.1.1

• Added core::to_kmers (k-mer iteration and rolling codes calculation)
• Updated examples

v0.1.0

core v0.1.0