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Allow edit distance #4

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scogi opened this issue Mar 18, 2022 · 0 comments
Open

Allow edit distance #4

scogi opened this issue Mar 18, 2022 · 0 comments
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enhancement New feature or request

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@scogi
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scogi commented Mar 18, 2022

Very useful tool, thank you. I was wondering, whether, respectively how the calculations for collision probabilty and collision numbers can be adapted to allow arbitrary edit distances when doing the UMI clustering. This would make AmpUMI useful also for assessing UMI applications with more error-prone third-gen sequencing data (like in PMID: 33432244).

Thank you
Best, Stefan

@scogi scogi changed the title Allow editing distances Allow edit distance Mar 18, 2022
@kclem kclem added the enhancement New feature or request label May 7, 2024
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