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Very useful tool, thank you. I was wondering, whether, respectively how the calculations for collision probabilty and collision numbers can be adapted to allow arbitrary edit distances when doing the UMI clustering. This would make AmpUMI useful also for assessing UMI applications with more error-prone third-gen sequencing data (like in PMID: 33432244).
Thank you
Best, Stefan
The text was updated successfully, but these errors were encountered:
scogi
changed the title
Allow editing distances
Allow edit distance
Mar 18, 2022
Very useful tool, thank you. I was wondering, whether, respectively how the calculations for collision probabilty and collision numbers can be adapted to allow arbitrary edit distances when doing the UMI clustering. This would make AmpUMI useful also for assessing UMI applications with more error-prone third-gen sequencing data (like in PMID: 33432244).
Thank you
Best, Stefan
The text was updated successfully, but these errors were encountered: