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environment.yml
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environment.yml
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name: pytorch
channels:
- pytorch
- anaconda
- conda-forge
- defaults
- bioconda
dependencies:
- _libgcc_mutex=0.1=main
- _pytorch_select=0.2=gpu_0
- absl-py=0.7.1=py37_0
- asn1crypto=0.24.0=py37_1003
- attrs=19.3.0=py_0
- backcall=0.1.0=py37_0
- blas=1.0=mkl
- bleach=3.1.0=py37_0
- boto3=1.9.224=py_0
- botocore=1.12.224=py_0
- bzip2=1.0.8=h7b6447c_0
- c-ares=1.15.0=h7b6447c_1001
- ca-certificates=2020.4.5.1=hecc5488_0
- cairo=1.14.12=h8948797_3
- certifi=2020.4.5.1=py37hc8dfbb8_0
- cffi=1.12.3=py37h2e261b9_0
- chardet=3.0.4=py37_1003
- cloudpickle=1.2.2=py_1
- cryptography=2.7=py37h72c5cf5_0
- cudatoolkit=10.0.130=0
- cudnn=7.6.0=cuda10.0_0
- cycler=0.10.0=py_2
- cytoolz=0.10.1=py37h516909a_0
- dask-core=2.9.0=py_0
- dbus=1.13.12=h746ee38_0
- decorator=4.4.1=py_0
- defusedxml=0.6.0=py_0
- docutils=0.15.2=py37_0
- entrypoints=0.3=py37_0
- expat=2.2.6=he6710b0_0
- ffmpeg=4.0.2=ha0c5888_2
- fontconfig=2.13.0=h9420a91_0
- freeglut=3.0.0=hf484d3e_5
- freetype=2.9.1=h8a8886c_1
- future=0.17.1=py37_0
- geos=3.8.0=he1b5a44_0
- glib=2.56.2=hd408876_0
- gmp=6.1.2=hb3b607b_0
- gnutls=3.5.19=h2a4e5f8_1
- graphite2=1.3.13=h23475e2_0
- grpcio=1.16.1=py37hf8bcb03_1
- gst-plugins-base=1.14.0=hbbd80ab_1
- gstreamer=1.14.0=hb453b48_1
- h5py=2.8.0=py37h989c5e5_3
- harfbuzz=1.8.8=hffaf4a1_0
- hdf5=1.10.2=hba1933b_1
- icu=58.2=h9c2bf20_1
- idna=2.8=py37_1000
- imageio=2.6.1=py37_0
- importlib_metadata=0.23=py37_0
- intel-openmp=2019.4=243
- ipykernel=5.1.3=py37h39e3cac_0
- ipython=7.9.0=py37h39e3cac_0
- ipython_genutils=0.2.0=py37_0
- ipywidgets=7.5.1=py_0
- jasper=2.0.14=h07fcdf6_1
- jedi=0.15.1=py37_0
- jinja2=2.10.3=py_0
- jmespath=0.9.4=py_0
- joblib=0.14.1=py_0
- jpeg=9b=h024ee3a_2
- jsonschema=3.2.0=py37_0
- jupyter=1.0.0=py37_7
- jupyter_client=5.3.4=py37_0
- jupyter_console=6.0.0=py37_0
- jupyter_contrib_core=0.3.3=py_2
- jupyter_contrib_nbextensions=0.5.1=py37_0
- jupyter_core=4.6.1=py37_0
- jupyter_highlight_selected_word=0.2.0=py37_1000
- jupyter_latex_envs=1.4.6=py37_1000
- jupyter_nbextensions_configurator=0.4.1=py37_0
- kiwisolver=1.1.0=py37hc9558a2_0
- libblas=3.8.0=14_mkl
- libcblas=3.8.0=14_mkl
- libedit=3.1.20181209=hc058e9b_0
- libffi=3.2.1=hd88cf55_4
- libgcc-ng=9.1.0=hdf63c60_0
- libgfortran-ng=7.3.0=hdf63c60_0
- libglu=9.0.0=hf484d3e_1
- libiconv=1.15=h516909a_1005
- liblapack=3.8.0=14_mkl
- libopencv=3.4.2=hb342d67_1
- libopus=1.3=h7b6447c_0
- libpng=1.6.37=hbc83047_0
- libprotobuf=3.8.0=hd408876_0
- libsodium=1.0.16=h1bed415_0
- libstdcxx-ng=9.1.0=hdf63c60_0
- libtiff=4.0.10=h2733197_2
- libuuid=1.0.3=h1bed415_2
- libvpx=1.7.0=h439df22_0
- libxcb=1.13=h1bed415_1
- libxml2=2.9.9=hea5a465_1
- libxslt=1.1.33=h7d1a2b0_0
- lxml=4.5.0=py37hefd8a0e_0
- markdown=3.1.1=py37_0
- markupsafe=1.1.1=py37h7b6447c_0
- mistune=0.8.4=py37h7b6447c_0
- mkl=2019.4=243
- mkl-service=2.0.2=py37h7b6447c_0
- mkl_fft=1.0.12=py37ha843d7b_0
- mkl_random=1.0.2=py37hd81dba3_0
- more-itertools=7.2.0=py37_0
- nbconvert=5.6.1=py37_0
- nbformat=4.4.0=py37_0
- ncurses=6.1=he6710b0_1
- nettle=3.3=0
- networkx=2.4=py_0
- ninja=1.9.0=py37hfd86e86_0
- notebook=6.0.2=py37_0
- numpy=1.18.1=py37h8960a57_1
- numpy-base=1.17.4=py37hde5b4d6_0
- olefile=0.46=py37_0
- opencv=3.4.2=py37h6fd60c2_1
- openh264=1.8.0=hdbcaa40_1000
- openssl=1.1.1f=h516909a_0
- pandas=1.0.3=py37h0da4684_0
- pandoc=2.2.3.2=0
- pandocfilters=1.4.2=py37_1
- parso=0.5.1=py_0
- pcre=8.43=he6710b0_0
- pexpect=4.7.0=py37_0
- pickleshare=0.7.5=py37_0
- pillow=6.1.0=py37h34e0f95_0
- pip=19.1.1=py37_0
- pixman=0.38.0=h7b6447c_0
- prometheus_client=0.7.1=py_0
- prompt_toolkit=2.0.10=py_0
- protobuf=3.8.0=py37he6710b0_0
- ptyprocess=0.6.0=py37_0
- py-opencv=3.4.2=py37hb342d67_1
- pycparser=2.19=py37_0
- pygments=2.4.2=py_0
- pyopenssl=19.0.0=py37_0
- pyparsing=2.4.5=py_0
- pyqt=5.9.2=py37h22d08a2_1
- pyrsistent=0.15.5=py37h7b6447c_0
- pysocks=1.7.0=py37_0
- python=3.7.3=h0371630_0
- python-dateutil=2.8.0=py_0
- python_abi=3.7=1_cp37m
- pytorch=1.2.0=cuda100py37h938c94c_0
- pytorch-pretrained-bert=0.6.2=py37_0
- pytz=2019.3=py_0
- pywavelets=1.1.1=py37hc1659b7_0
- pyzmq=18.1.0=py37he6710b0_0
- qt=5.9.7=h5867ecd_1
- qtconsole=4.6.0=py_0
- readline=7.0=h7b6447c_5
- regex=2019.08.19=py37h516909a_0
- requests=2.22.0=py37_1
- s3transfer=0.2.1=py37_0
- scikit-learn=0.22=py37hcdab131_1
- scipy=1.3.1=py37h7c811a0_0
- send2trash=1.5.0=py37_0
- setuptools=41.0.1=py37_0
- shapely=1.6.4=py37h5d51c17_1007
- sip=4.19.13=py37he6710b0_0
- six=1.12.0=py37_0
- sqlite=3.28.0=h7b6447c_0
- tensorboard=1.14.0=py37_0
- tensorboardx=1.8=py_0
- terminado=0.8.3=py37_0
- testpath=0.4.4=py_0
- tk=8.6.8=hbc83047_0
- toolz=0.10.0=py_0
- torchvision=0.4.0=py37_cu100
- tornado=6.0.3=py37h7b6447c_0
- tqdm=4.35.0=py_0
- traitlets=4.3.3=py37_0
- urllib3=1.25.3=py37_0
- wcwidth=0.1.7=py37_0
- webencodings=0.5.1=py37_1
- werkzeug=0.15.5=py_0
- wheel=0.33.4=py37_0
- widgetsnbextension=3.5.1=py37_0
- x264=1!152.20180717=h14c3975_1001
- xlrd=1.2.0=py37_0
- xz=5.2.4=h14c3975_4
- yaml=0.2.2=h516909a_1
- zeromq=4.3.1=he6710b0_3
- zipp=0.6.0=py_0
- zlib=1.2.11=h7b6447c_3
- zstd=1.3.7=h0b5b093_0
- pip:
- albumentations==0.3.3
- connected-components-3d==1.5.0
- imgaug==0.2.6
- matplotlib==3.1.1
- munch==2.3.2
- pretrainedmodels==0.7.4
- pyyaml==5.1.2
- scikit-image==0.16.2
- tb-nightly==1.15.0a20190903
- tensorboard-pytorch==0.7.1
- torchsummary==1.5.1