-
Notifications
You must be signed in to change notification settings - Fork 24
/
editor.py
385 lines (316 loc) · 17.8 KB
/
editor.py
1
2
3
4
5
6
7
8
9
10
11
12
13
14
15
16
17
18
19
20
21
22
23
24
25
26
27
28
29
30
31
32
33
34
35
36
37
38
39
40
41
42
43
44
45
46
47
48
49
50
51
52
53
54
55
56
57
58
59
60
61
62
63
64
65
66
67
68
69
70
71
72
73
74
75
76
77
78
79
80
81
82
83
84
85
86
87
88
89
90
91
92
93
94
95
96
97
98
99
100
101
102
103
104
105
106
107
108
109
110
111
112
113
114
115
116
117
118
119
120
121
122
123
124
125
126
127
128
129
130
131
132
133
134
135
136
137
138
139
140
141
142
143
144
145
146
147
148
149
150
151
152
153
154
155
156
157
158
159
160
161
162
163
164
165
166
167
168
169
170
171
172
173
174
175
176
177
178
179
180
181
182
183
184
185
186
187
188
189
190
191
192
193
194
195
196
197
198
199
200
201
202
203
204
205
206
207
208
209
210
211
212
213
214
215
216
217
218
219
220
221
222
223
224
225
226
227
228
229
230
231
232
233
234
235
236
237
238
239
240
241
242
243
244
245
246
247
248
249
250
251
252
253
254
255
256
257
258
259
260
261
262
263
264
265
266
267
268
269
270
271
272
273
274
275
276
277
278
279
280
281
282
283
284
285
286
287
288
289
290
291
292
293
294
295
296
297
298
299
300
301
302
303
304
305
306
307
308
309
310
311
312
313
314
315
316
317
318
319
320
321
322
323
324
325
326
327
328
329
330
331
332
333
334
335
336
337
338
339
340
341
342
343
344
345
346
347
348
349
350
351
352
353
354
355
356
357
358
359
360
361
362
363
364
365
366
367
368
369
370
371
372
373
374
375
376
377
378
379
380
381
382
383
384
385
# -*- coding: utf-8 -*-
# Owlready2
# Copyright (C) 2013-2019 Jean-Baptiste LAMY
# LIMICS (Laboratoire d'informatique médicale et d'ingénierie des connaissances en santé), UMR_S 1142
# University Paris 13, Sorbonne paris-Cité, Bobigny, France
# This program is free software: you can redistribute it and/or modify
# it under the terms of the GNU Lesser General Public License as published by
# the Free Software Foundation, either version 3 of the License, or
# (at your option) any later version.
# This program is distributed in the hope that it will be useful,
# but WITHOUT ANY WARRANTY; without even the implied warranty of
# MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
# GNU Lesser General Public License for more details.
# You should have received a copy of the GNU Lesser General Public License
# along with this program. If not, see <http://www.gnu.org/licenses/>.
from collections import defaultdict
from functools import reduce
import editobj3, editobj3.introsp as introsp, editobj3.field as field, editobj3.editor as editor
from owlready2 import *
from owlready2.base import _universal_datatype_2_abbrev
from owlready2.prop import _CLASS_PROPS, _TYPE_PROPS
IGNORE_DOMAINLESS_PROPERTY = False
introsp.def_attr("topObjectProperty", field.HiddenField)
def _keep_most_generic(s):
r = set()
for i in s:
for parent in i.is_a:
if parent in s: break
else: r.add(i)
return r
#def _available_ontologies(o):
# return sorted(o.ontology.indirectly_imported_ontologies(), key = lambda x: x.name)
def _available_classes():
#r = set()
#for ontology in o.ontology.indirectly_imported_ontologies():
# r.update(ontology.classes)
r = default_world.search(subclass_of = Thing)
return sorted(_keep_most_generic(r), key = lambda x: str(x))
#def _available_properties(o):
# r = set()
# for ontology in o.ontology.indirectly_imported_ontologies():
# r.update(ontology.properties)
# return sorted(_keep_most_generic(r), key = lambda x: str(x))
#def _available_properties_and_types(o):
# return [FunctionalProperty, InverseFunctionalProperty, TransitiveProperty, SymmetricProperty, AsymmetricProperty, ReflexiveProperty, IrreflexiveProperty] + _available_properties(o)
#def _available_classes_and_datatypes(o):
# r = set()
# for ontology in o.ontology.indirectly_imported_ontologies():
# r.update(ontology.classes)
# r = _keep_most_generic(r)
# r.update(owlready._PYTHON_2_DATATYPES.keys())
# return sorted(r, key = lambda x: str(x))
def _get_label(o): return str(o).replace("_", " ")
#descr = introsp.description(EntityClass)
#descr.def_attr("ontology" , field.HiddenField)
#descr = introsp.description_for_type(Thing)
##descr.def_attr("ontology" , field.ObjectSelectorField, addable_values = _available_ontologies)
#descr.def_attr("namespace" , field.HiddenField)
#descr.def_attr("name" , field.StringField)
#descr.def_attr("python_name" , field.StringField)
#descr.def_attr("is_a" , field.HierarchyAndObjectListField, addable_values = _available_classes)
#descr.def_attr("equivalent_to", field.HierarchyAndObjectListField, addable_values = _available_classes)
#descr.set_label(_get_label)
#descr.set_icon_filename(os.path.join(os.path.dirname(__file__), "icons", "owl_class.svg"))
#descr = introsp.description_for_type(Property)
##descr.def_attr("ontology" , field.ObjectSelectorField, addable_values = _available_ontologies)
#descr.def_attr("namespace" , field.HiddenField)
#descr.def_attr("name" , field.StringField)
#descr.def_attr("python_name" , field.StringField)
#descr.def_attr("is_a" , field.HierarchyAndObjectListField, addable_values = _available_properties_and_types)
#descr.def_attr("domain" , field.HierarchyAndObjectListField, addable_values = _available_classes , reorder_method = None)
#descr.def_attr("range" , field.HierarchyAndObjectListField, addable_values = _available_classes_and_datatypes, reorder_method = None)
#descr.def_attr("inverse_property", field.ObjectSelectorField , addable_values = lambda o: [None] + _available_properties(o))
#descr.def_attr("equivalent_to" , field.HierarchyAndObjectListField, addable_values = _available_properties_and_types)
#descr.set_label(_get_label)
#descr.set_icon_filename(os.path.join(os.path.dirname(__file__), "icons", "owl_property.svg"))
descr = introsp.description(Thing)
descr.def_attr("iri" , field.StringField)
descr.def_attr("namespace" , field.HiddenField)
descr.def_attr("is_a" , field.HiddenField)
descr.def_attr("is_instance_of" , field.HiddenField)
descr.def_attr("name" , field.HiddenField)
descr.def_attr("storid" , field.HiddenField)
descr.def_attr("equivalent_to" , field.HiddenField)
descr.def_attr("properties" , field.HiddenField)
descr.def_attr("inverse_properties", field.HiddenField)
descr.set_label(_get_label)
descr.set_icon_filename(os.path.join(os.path.dirname(__file__), "icons", "owl_instance.svg"))
descr.set_constructor(introsp.Constructor(lambda Class, parent: Class(namespace = parent.namespace)))
introsp.MAX_NUMBER_OF_ATTRIBUTE_FOR_EMBEDDING = 0
def _get_priority(Prop):
return Prop.editobj_priority.first()
def _intersect_reduce(s):
if not s: return set()
if len(s) == 1: return s[0]
return reduce(set.intersection, s)
def _flattened_or(Classes):
if Classes: yield from _flattened_or_iteration(Classes)
else: yield Thing
def _flattened_or_iteration(Classes):
for Class in Classes:
if isinstance(Class, ThingClass): yield Class
elif isinstance(Class, Or): yield from _flattened_or_iteration(Class.Classes)
def _get_class_one_of(Class):
if isinstance(Class, OneOf): return Class.instances
if isinstance(Class, ThingClass):
s = []
for ancestor in Class.ancestors():
for superclass in ancestor.is_a + ancestor.equivalent_to:
if isinstance(superclass, OneOf): s.append(superclass.instances)
return _intersect_reduce(s)
def _prop_use_children_group(Prop, domain):
for superprop in Prop.mro():
if (superprop in _CLASS_PROPS) or (superprop in _TYPE_PROPS): continue
if isinstance(superprop, PropertyClass) and not superprop.is_functional_for(domain): return True
for range in _flattened_or(Prop.range):
if isinstance(range, ThingClass) and _has_object_property(range): return True
return False
def _has_object_property(Class):
for Prop in Class._get_class_possible_relations():
if not isinstance(Prop, DataPropertyClass): return True
return False
def _is_abstract_class(Class):
for superclass in Class.is_a + list(Class.equivalent_to.indirect()):
if isinstance(superclass, Or):
for or_class in superclass.Classes:
if not isinstance(or_class, ThingClass): break
else: return True
def configure_editobj_from_ontology(onto):
introsp._init_for_owlready2()
for Prop in onto.properties():
if len(Prop.range) != 1: continue
if isinstance(Prop, DataPropertyClass): ranges = [Prop.range[0]]
else: ranges = list(_flattened_or(Prop.range))
if not ranges: continue
priority = _get_priority(Prop)
for domain in _flattened_or(Prop.domain):
if isinstance(domain, ThingClass):
if len(ranges) == 1: one_of = _get_class_one_of(ranges[0])
else: one_of = None
if one_of: RangeInstanceOnly(Prop, domain, one_of)
else: RangeClassOnly (Prop, domain, ranges)
for Class in onto.classes():
for superclass in Class.is_a: _configure_class_restriction(Class, superclass)
for superclass in Class.equivalent_to.indirect(): _configure_class_restriction(Class, superclass)
for prop_children_group in PROP_CHILDREN_GROUPS.values():
if prop_children_group.changed: prop_children_group.define_children_groups()
def _configure_class_restriction(Class, restriction):
if isinstance(restriction, And):
for sub_restriction in restriction.Classes:
_configure_class_restriction(Class, sub_restriction)
elif isinstance(restriction, Restriction):
if restriction.type == "VALUE":
introsp.description(Class).def_attr(restriction.Prop.python_name, field.LabelField, priority = _get_priority(restriction.Prop))
elif restriction.type == "ONLY":
if isinstance(restriction.Prop, ObjectPropertyClass):
if isinstance(restriction.Class, ThingClass):
ranges = [restriction.Class]
elif isinstance(restriction.Class, LogicalClassConstruct):
ranges = list(_flattened_or(restriction.Class.Classes))
else: return
if len(ranges) == 1: one_of = _get_class_one_of(ranges[0])
else: one_of = None
if one_of: RangeInstanceOnly(restriction.Prop, Class, one_of)
else: RangeClassOnly (restriction.Prop, Class, ranges)
elif (restriction.type == "EXACTLY") or (restriction.type == "MAX"):
# These restrictions can make the Property functional for the given Class
# => Force the redefinition of the field type by creating an empty range restriction list
if restriction.cardinality == 1:
for subprop in restriction.Prop.descendants(include_self = False):
prop_children_group = get_prop_children_group(subprop)
prop_children_group.range_restrictions[Class] # Create the list if not already existent
prop_children_group.changed = True
elif isinstance(restriction, Not):
for sub_restriction in _flattened_or([restriction.Class]):
if isinstance(sub_restriction, Restriction):
if sub_restriction.type == SOME and isinstance(sub_restriction.Prop, ObjectPropertyClass):
ranges = list(_flattened_or([sub_restriction.Class]))
if len(ranges) == 1: one_of = _get_class_one_of(ranges[0])
else: one_of = None
if one_of: RangeInstanceExclusion(sub_restriction.Prop, Class, one_of)
else: RangeClassExclusion (sub_restriction.Prop, Class, ranges)
PROP_CHILDREN_GROUPS = {}
def get_prop_children_group(Prop): return PROP_CHILDREN_GROUPS.get(Prop) or PropChildrenGroup(Prop)
class PropChildrenGroup(object):
def __init__(self, Prop):
self.Prop = Prop
self.range_restrictions = defaultdict(list)
self.changed = False
PROP_CHILDREN_GROUPS[Prop] = self
def define_children_groups(self):
self.changed = False
priority = _get_priority(self.Prop)
for domain in set(self.range_restrictions):
descr = introsp.description(domain)
functional = self.Prop.is_functional_for(domain)
range_restrictions = set()
for superclass in domain.mro():
s = self.range_restrictions.get(superclass)
if s: range_restrictions.update(s)
range_instance_onlys = { range_restriction for range_restriction in range_restrictions if isinstance(range_restriction, RangeInstanceOnly) }
if range_instance_onlys:
instances = _intersect_reduce([i.ranges for i in range_instance_onlys])
d = { instance.name : instance for instance in instances }
if functional:
d["None"] = None
descr.def_attr(self.Prop.python_name, field.EnumField(d), priority = priority, optional = False)
else:
descr.def_attr(self.Prop.python_name, field.EnumListField(d), priority = priority, optional = False)
else:
if isinstance(self.Prop, DataPropertyClass):
datatype = None
for range_restriction in range_restrictions:
if isinstance(range_restriction, RangeClassOnly):
for range in range_restriction.ranges:
if range in _universal_datatype_2_abbrev:
datatype = range
break
if datatype:
if datatype is int:
if functional: descr.def_attr(self.Prop.python_name, field.IntField , allow_none = True, optional = False, priority = priority)
else: descr.def_attr(self.Prop.python_name, field.IntListField , optional = False, priority = priority)
elif datatype is float:
if functional: descr.def_attr(self.Prop.python_name, field.FloatField , allow_none = True, optional = False, priority = priority)
else: descr.def_attr(self.Prop.python_name, field.FloatListField , optional = False, priority = priority)
elif datatype is normstr:
if functional: descr.def_attr(self.Prop.python_name, field.StringField , allow_none = True, optional = False, priority = priority)
else: descr.def_attr(self.Prop.python_name, field.StringListField, optional = False, priority = priority)
elif datatype is str:
if functional: descr.def_attr(self.Prop.python_name, field.TextField , allow_none = True, optional = False, priority = priority)
else: descr.def_attr(self.Prop.python_name, field.StringListField, optional = False, priority = priority)
elif datatype is bool:
if functional: descr.def_attr(self.Prop.python_name, field.BoolField , optional = False, priority = priority)
else:
if functional: descr.def_attr(self.Prop.python_name, field.EntryField , allow_none = True, optional = False, priority = priority)
else: descr.def_attr(self.Prop.python_name, field.EntryListField , optional = False, priority = priority)
else:
values_lister = ValuesLister(self.Prop, domain, range_restrictions)
if _prop_use_children_group(self.Prop, domain) or values_lister.values_have_children():
if self.Prop.inverse: inverse_attr = self.Prop.inverse.python_name
else: inverse_attr = ""
if functional: field_class = field.HierarchyOrObjectSelectorField
else: field_class = field.HierarchyOrObjectListField
descr.def_attr(self.Prop.python_name,
field_class,
addable_values = values_lister.available_values,
inverse_attr = inverse_attr,
priority = priority)
else:
descr.def_attr(self.Prop.python_name,
field.ObjectSelectorField,
addable_values = values_lister.available_values,
priority = priority)
class RangeRestriction(object):
def __init__(self, Prop, domain, ranges):
self.domain = domain
self.ranges = ranges
for subprop in Prop.descendants(include_self = True):
prop_children_group = get_prop_children_group(subprop)
prop_children_group.range_restrictions[domain].append(self)
prop_children_group.changed = True
def __repr__(self): return "<%s %s %s>" % (self.__class__.__name__, self.domain, self.ranges)
def get_classes(self):
available_classes = set()
for range in self.ranges:
for subrange in range.descendants(): available_classes.add(subrange)
return available_classes
class RangeClassOnly (RangeRestriction): pass
class RangeClassExclusion (RangeRestriction): pass
class RangeInstanceOnly (RangeRestriction): pass
class RangeInstanceExclusion(RangeRestriction): pass
VALUES_LISTERS = {}
class ValuesLister(object):
def __init__(self, Prop, domain, range_restrictions):
self.Prop = Prop
self.domain = domain
self.range_restrictions = range_restrictions
VALUES_LISTERS[Prop, domain] = self
def values_have_children(self):
for range_restriction in self.range_restrictions:
if isinstance(range_restriction, RangeClassOnly):
for range in range_restriction.ranges:
for subrange in range.descendants():
for attribute in introsp.description(subrange).attributes.values():
try: return issubclass(attribute.field_class, FieldInHierarchyPane)
except: return False # attribute.field_class if a func and not a class
def available_values(self, subject):
available_classes = []
excluded_classes = set()
for range_restriction in self.range_restrictions:
if isinstance(range_restriction, RangeClassOnly):
available_classes.append(range_restriction.get_classes())
elif isinstance(range_restriction, RangeClassExclusion):
excluded_classes.update(range_restriction.get_classes())
available_classes = _intersect_reduce(available_classes)
available_classes.difference_update(excluded_classes)
available_classes = sorted(available_classes, key = lambda Class: Class.name)
new_instances_of = [introsp.NewInstanceOf(Class) for Class in available_classes if (not _get_class_one_of(Class)) and (not _is_abstract_class(Class))]
existent_values = set()
for Class in available_classes:
existent_values.update(default_world.search(type = Class))
if excluded_classes:
excluded_classes = tuple(excluded_classes)
existent_values = [o for o in existent_values if not isinstance(o, excluded_classes)]
# For InverseFunctional props, remove values already used.
if issubclass(self.Prop, InverseFunctionalProperty) and self.Prop.inverse_property:
existent_values = { value for value in existent_values
if not getattr(value, self.Prop.inverse_property.python_name) }
existent_values = sorted(existent_values, key = lambda obj: obj.name)
return new_instances_of + existent_values
def range_match_classes(self, classes):
classes = tuple(classes)
for range_restriction in self.range_restrictions:
if isinstance(range_restriction, RangeClassOnly):
for range in range_restriction.ranges:
if issubclass(range, classes): return True