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Copy pathucsc.hg19.microsatellites.select138.list
139 lines (139 loc) · 6.08 KB
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ucsc.hg19.microsatellites.select138.list
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chromosome location repeat_unit_length repeat_unit_binary repeat_times left_flank_binary right_flank_binary repeat_unit_bases left_flank_bases right_flank_bases
chr1 9770690 2 2 11 925 68 AG TGCTC ACACA
chr1 22405379 1 3 18 737 563 T GTGAC GATAT
chr1 27100181 3 36 8 341 107 GCA CCCCC ACGGT
chr1 72748277 1 3 33 296 698 T CAGGA GGTGG
chr1 78414310 1 0 18 1021 640 A TTTTC GGAAA
chr1 156842810 2 11 22 8 992 GT AAAGA TTGAA
chr1 156845492 2 11 18 536 130 GT GACGA AGAAG
chr1 158637865 1 0 16 142 335 A AGATG CCATT
chr1 158656347 2 2 9 749 12 AG GTGTC AAATA
chr1 162749855 2 13 8 51 1022 TC AATAT TTTTG
chr1 176050430 1 0 16 206 528 A ATATG GACAA
chr1 226259212 1 0 17 989 1015 A TTCTC TTTCT
chr1 241663905 2 2 17 738 79 AG GTGAG ACATT
chr1 243736210 1 3 15 241 95 T ATTAC ACCTT
chr2 29449344 1 0 24 605 552 A GCCTC GAGGA
chr2 39536689 1 3 27 296 553 T CAGGA GAGGC
chr2 47641559 1 0 27 299 687 A CAGGT GGGTT
chr2 47642315 1 3 23 266 546 T CAAGG GAGAG
chr2 47642511 1 3 15 249 491 T ATTGC CTGGT
chr2 47642595 1 3 22 144 545 T AGCAA GAGAC
chr2 47702451 1 3 19 1022 55 T TTTTG AATCT
chr2 95849361 1 3 23 860 738 T TCCTA GTGAG
chr2 99160508 2 4 9 742 477 CA GTGCG CTCTC
chr2 120714401 1 3 16 709 144 T GTACC AGCAA
chr2 141625834 1 0 19 247 515 A ATTCT GAAAT
chr2 202146656 1 3 22 61 248 T AATTC ATTGA
chr2 215657182 1 0 16 783 577 A TAATT GCAAC
chr2 227663855 2 9 9 296 501 GC CAGGA CTTCC
chr3 10128965 1 3 19 565 56 T GATCC AATGA
chr3 12646749 2 14 16 316 817 TG CATTA TATAC
chr3 47205502 3 38 10 389 586 GCG CGACC GCAGG
chr3 72495593 1 0 17 287 727 A CACTT GTCCT
chr3 72895449 1 3 17 957 132 T TGTTC AGACA
chr3 169988364 1 3 20 949 34 T TGTCC AAGAG
chr3 185009691 1 0 20 1013 955 A TTTCC TGTGT
chr3 185784051 1 0 18 745 832 A GTGGC TCAAA
chr3 185787290 1 3 19 190 0 T AGTTG AAAAA
chr4 25666785 1 3 20 249 545 T ATTGC GAGAC
chr4 55135671 2 1 15 787 20 AC TACAT AACCA
chr4 55598211 1 3 25 1016 544 T TTTGA GAGAA
chr4 106163095 1 3 15 485 412 T CTGCC CGCTA
chr4 143181731 1 0 16 59 1022 A AATGT TTTTG
chr4 185340725 1 0 20 862 688 A TCCTG GGTAA
chr5 31483753 1 0 16 226 512 A ATGAG GAAAA
chr5 56177848 3 16 8 815 290 CAA TAGTT CAGAG
chr5 86669949 2 3 8 684 1023 AT GGGTA TTTTT
chr5 96143890 2 11 37 565 904 GT GATCC TGAGA
chr6 407629 1 3 19 1013 561 T TTTCC GATAC
chr6 32191658 3 9 10 275 184 AGC CACAT AGTGA
chr6 117642992 1 3 20 656 584 T GGCAA GCAGA
chr6 117647254 2 12 18 35 721 TA AAGAT GTCAC
chr6 157099981 3 41 8 614 650 GGC GCGCG GGAGG
chr6 162683814 1 0 21 43 640 A AAGGT GGAAA
chr6 163991476 1 3 16 82 746 T ACCAG GTGGG
chr7 5991101 1 3 16 766 545 T GTTTG GAGAC
chr7 6037057 1 0 17 30 977 A AACTG TTCAC
chr7 55269062 2 13 8 478 39 TC CTCTG AAGCT
chr7 116409675 1 3 15 261 383 T CAACC CCTTT
chr7 129680648 1 0 15 221 572 A ATCTC GATTA
chr7 140470327 1 0 19 485 657 A CTGCC GGCAC
chr7 140470730 1 0 18 221 320 A ATCTC CCAAA
chr7 140472072 3 4 14 775 47 ACA TAACT AAGTT
chr7 140475149 1 3 15 61 545 T AATTC GAGAC
chr7 140480044 1 3 18 301 33 T CAGTC AAGAC
chr7 140482263 1 0 16 1013 833 A TTTCC TCAAC
chr7 140496148 1 0 16 223 671 A ATCTT GGCTT
chr7 140498359 1 3 21 421 9 T CGGCC AAAGC
chr7 151875100 1 0 27 511 576 A CTTTT GCAAA
chr8 37555933 3 25 9 658 471 CGC GGCAG CTCCT
chr8 38321830 1 0 23 221 577 A ATCTC GCAAC
chr8 48732074 1 0 21 991 676 A TTCTT GGGCA
chr8 69017916 2 12 9 931 931 TA TGGAT TGGAT
chr8 117868531 1 0 23 123 721 A ACTGT GTCAC
chr9 37807655 1 3 21 1021 545 T TTTTC GAGAC
chr9 87430433 1 3 16 350 371 T CCCTG CCTAT
chr9 98270324 2 11 8 184 546 GT AGTGA GAGAG
chr9 101867537 3 41 9 743 633 GGC GTGCT GCTGC
chr9 135773000 1 0 18 862 542 A TCCTG GACTG
chr9 139565479 1 2 15 1003 297 G TTGGT CAGGC
chr10 8115668 1 0 18 11 995 A AAAGT TTGAT
chr10 123240903 2 1 16 770 1 AC TAAAG AAAAC
chr11 102056722 1 3 15 312 492 T CATGA CTGTA
chr11 102080325 1 0 15 122 563 A ACTGG GATAT
chr11 108114661 1 3 15 48 32 T AATAA AAGAA
chr11 108121410 1 3 15 821 167 T TATCC AGGCT
chr11 108141955 1 3 15 897 81 T TGAAC ACCAC
chr11 118353037 1 3 16 50 451 T AATAG CTAAT
chr11 118359946 1 0 21 221 460 A ATCTC CTATA
chr11 118369265 1 0 15 639 543 A GCTTT GACTT
chr12 432376 1 0 29 881 512 A TCTAC GAAAA
chr12 498267 1 2 15 421 853 G CGGCC TCCCC
chr12 12024131 1 3 18 725 324 T GTCCC CCACA
chr12 12025428 1 3 21 241 545 T ATTAC GAGAC
chr12 12030236 1 3 16 801 63 T TAGAC AATTT
chr12 12032966 1 0 19 959 640 A TGTTT GGAAA
chr12 21623284 1 0 16 369 258 A CCTAC CAAAG
chr12 46287170 2 13 10 963 909 TC TTAAT TGATC
chr12 72019989 2 1 14 243 710 AC ATTAT GTACG
chr12 120806923 3 38 9 616 474 GCG GCGGA CTCGG
chr13 28942677 3 14 8 807 195 ATG TAGCT ATAAT
chr13 28961945 1 0 15 895 541 A TCTTT GACTC
chr13 110436296 3 26 8 164 350 CGG AGGCA CCCTG
chr13 110438316 3 47 8 494 555 GTT CTGTG GAGGT
chr14 23652346 1 0 21 999 660 A TTGCT GGCCA
chr14 36988928 2 2 8 464 584 AG CTCAA GCAGA
chr14 68331678 1 3 39 1 143 T AAAAC AGATT
chr14 69149627 1 3 20 233 716 T ATGGC GTATA
chr14 102550069 1 0 18 527 448 A GAATT CTAAA
chr15 34636112 1 3 18 913 32 T TGCAC AAGAA
chr15 43739686 1 0 16 990 512 A TTCTG GAAAA
chr15 101550861 1 3 15 685 148 T GGGTC AGCCA
chr16 9934670 1 0 20 41 546 A AAGGC GAGAG
chr16 23646141 3 52 8 31 17 TCA AACTT AACAC
chr16 72821593 3 37 8 792 89 GCC TACGA ACCGC
chr16 72832618 1 0 16 495 832 A CTGTT TCAAA
chr16 79633098 3 22 8 407 341 CCG CGCCT CCCCC
chr17 7578711 1 3 18 1021 547 T TTTTC GAGAT
chr17 29508819 1 3 16 248 735 T ATTGA GTCTT
chr17 41203655 1 3 16 481 545 T CTGAC GAGAC
chr17 41205986 1 0 15 735 515 A GTCTT GAAAT
chr17 41206761 1 3 16 936 547 T TGGGA GAGAT
chr17 41208191 1 3 16 909 511 T TGATC CTTTT
chr17 41216844 1 3 21 996 547 T TTGCA GAGAT
chr17 41219272 1 3 18 838 545 T TCACG GAGAC
chr17 41250836 1 3 15 157 547 T AGCTC GAGAT
chr17 41275366 1 3 25 334 547 T CCATG GAGAT
chr18 649879 1 3 15 485 43 T CTGCC AAGGT
chr18 19752072 3 5 10 539 214 ACC GACGT ATCCG
chr18 56363569 1 3 26 1008 160 T TTTAA AGGAA
chr19 7184651 2 8 10 30 672 GA AACTG GGGAA
chr20 46279836 3 18 9 144 260 CAG AGCAA CAACA
chr20 46282112 1 3 22 116 378 T ACTCA CCTGG
chr21 42862073 1 0 15 493 562 A CTGTC GATAG
chr21 42866994 1 0 16 733 707 A GTCTC GTAAT
chr21 42867553 1 0 16 733 327 A GTCTC CCACT
chr21 42868756 1 3 28 885 545 T TCTCC GAGAC
chr21 42873535 1 0 28 733 513 A GTCTC GAAAC
chr22 23618594 1 0 15 2 679 A AAAAG GGGCT