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Add hooks for ITK and MONAI #778

Merged
merged 4 commits into from
Aug 7, 2024
Merged

Add hooks for ITK and MONAI #778

merged 4 commits into from
Aug 7, 2024

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MattTheCuber
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Closes #777

I manually tested import functionality. No tests written due to #777 (comment)

@MattTheCuber MattTheCuber marked this pull request as ready for review August 6, 2024 18:55
@bwoodsend
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bwoodsend commented Aug 7, 2024 •
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No tests written due to #777 (comment)

I think Rok really meant don't add the packages to requirements-test-libraries.txt. It's still nice to have tests that we can run locally. We just don't want to have our CI clogged up with massive CUDA/torch binaries.

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MattTheCuber commented Aug 7, 2024 •
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Should I add the tests to test_deep_learning.py or test_libraries.py?

@rokm rokm merged commit 4324d79 into pyinstaller:master Aug 7, 2024
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@MattTheCuber MattTheCuber deleted the hooks-for-monai branch August 7, 2024 19:24
github-actions bot pushed a commit to wxx9248/Pickle-Rush that referenced this pull request Aug 12, 2024
@dependabot
Dependency Updates: Bump pyinstaller-hooks-contrib from 2024.7 to 202…
41ac822 
…4.8 (#108)

Bumps
[pyinstaller-hooks-contrib](https://github.com/pyinstaller/pyinstaller-hooks-contrib)
from 2024.7 to 2024.8.
<details>
<summary>Release notes</summary>
<p><em>Sourced from <a
href="https://github.com/pyinstaller/pyinstaller-hooks-contrib/releases">pyinstaller-hooks-contrib's
releases</a>.</em></p>
<blockquote>
<h2>v2024.8</h2>
<p>Please see the <a
href="https://www.github.com/pyinstaller/pyinstaller-hooks-contrib/tree/v2024.8/CHANGELOG.rst">changelog</a>
for more details</p>
</blockquote>
</details>
<details>
<summary>Changelog</summary>
<p><em>Sourced from <a
href="https://github.com/pyinstaller/pyinstaller-hooks-contrib/blob/master/CHANGELOG.rst">pyinstaller-hooks-contrib's
changelog</a>.</em></p>
<blockquote>
<h2>2024.8 (2024-08-09)</h2>
<p>New hooks</p>
<pre><code>
* Add a hook for ``cmocean``, which has text data files.
(`[#769](pyinstaller/pyinstaller-hooks-contrib#769)

&lt;https://github.com/pyinstaller/pyinstaller-hooks-contrib/issues/769&gt;`_)
* Add a hook for ``pydicom``, which has hidden imports.
(`[#776](pyinstaller/pyinstaller-hooks-contrib#776)

&lt;https://github.com/pyinstaller/pyinstaller-hooks-contrib/issues/776&gt;`_)
* Add a hook for ``tzwhere``, which has data files.
(`[#772](pyinstaller/pyinstaller-hooks-contrib#772)

&lt;https://github.com/pyinstaller/pyinstaller-hooks-contrib/issues/772&gt;`_)
* Add hook for ``monai`` to collect its source .py files for
TorchScript/JIT.

(`[#778](pyinstaller/pyinstaller-hooks-contrib#778)

&lt;https://github.com/pyinstaller/pyinstaller-hooks-contrib/issues/778&gt;`_)
* Add hooks for ``itk`` to work around the package's requirements about
the ``itk/Configuration`` directory.
(`[#778](pyinstaller/pyinstaller-hooks-contrib#778)

&lt;https://github.com/pyinstaller/pyinstaller-hooks-contrib/issues/778&gt;`_)
* Added hooks for the ``trame`` suite of libraries, which has data files
and
hidden imports.
(`[#775](pyinstaller/pyinstaller-hooks-contrib#775)

&lt;https://github.com/pyinstaller/pyinstaller-hooks-contrib/issues/775&gt;`_)
<p>Updated hooks
</code></pre></p>
<ul>
<li>Rework the OpenSSL version check in <code>cryptography</code> hook
to fix
compatibility with <code>cryptography</code> 43.0.0.
(<code>[#768](pyinstaller/pyinstaller-hooks-contrib#768)
&lt;https://github.com/pyinstaller/pyinstaller-hooks-contrib/issues/768&gt;</code>_)</li>
<li>Update <code>hydra</code> hook to include work-around for
<code>hydra</code>'s plugin
manager, which under python &lt; 3.10 (still) uses deprecated PEP-302
that was removed from PyInstaller's <code>PyiFrozenImporter</code> in
PyInstaller 5.8. When building using python <!-- raw HTML omitted -->=
5.8,
the modules collected from <code>hydra._internal.core_plugins</code> and
<code>hydra_plugins</code> packages are now collected as source .py
files only;
this way, they are handled by built-in python's finder/importer instead
of PyInstaller's <code>PyiFrozenImporter</code>.
(<code>[#760](pyinstaller/pyinstaller-hooks-contrib#760)
&lt;https://github.com/pyinstaller/pyinstaller-hooks-contrib/issues/760&gt;</code>_)</li>
<li>Update <code>imageio_ffmpeg</code> hook for compatibility with
<code>imageio-ffmpeg</code>
0.5.0 and later.
(<code>[#766](pyinstaller/pyinstaller-hooks-contrib#766)
&lt;https://github.com/pyinstaller/pyinstaller-hooks-contrib/issues/766&gt;</code>_)</li>
<li>Update <code>pyexcel_ods</code> hook to add missing hidden import
and add tests.

(<code>[#779](pyinstaller/pyinstaller-hooks-contrib#779)
&lt;https://github.com/pyinstaller/pyinstaller-hooks-contrib/issues/779&gt;</code>_)</li>
</ul>
<p>Project &amp; Process</p>
<pre><code>
* Released sdists and tagged GitHub source archives contain the
changelog
&lt;/tr&gt;&lt;/table&gt; 
</code></pre>
</blockquote>
<p>... (truncated)</p>
</details>
<details>
<summary>Commits</summary>
<ul>
<li><a
href="https://github.com/pyinstaller/pyinstaller-hooks-contrib/commit/c1affefbe2bb8a35ecd05f6779727eec5b70eec5"><code>c1affef</code></a>
Release v2024.8</li>
<li><a
href="https://github.com/pyinstaller/pyinstaller-hooks-contrib/commit/1f84e9b0b985a8b47fbb92e16c2c115191545041"><code>1f84e9b</code></a>
Fix release verion bumper</li>
<li><a
href="https://github.com/pyinstaller/pyinstaller-hooks-contrib/commit/46b318260d89f1da5f95962d262b09f25fb0d56c"><code>46b3182</code></a>
Add hooks for trame (<a
href="https://redirect.github.com/pyinstaller/pyinstaller-hooks-contrib/issues/775">#775</a>)</li>
<li><a
href="https://github.com/pyinstaller/pyinstaller-hooks-contrib/commit/4324d79432311672d7fb6970266e9b63fe3780ff"><code>4324d79</code></a>
Add hooks for ITK and MONAI (<a
href="https://redirect.github.com/pyinstaller/pyinstaller-hooks-contrib/issues/778">#778</a>)</li>
<li><a
href="https://github.com/pyinstaller/pyinstaller-hooks-contrib/commit/7e6c20f983aae10f3750766adc2efc89bc100c42"><code>7e6c20f</code></a>
Update hook for pyexcel_ods (<a
href="https://redirect.github.com/pyinstaller/pyinstaller-hooks-contrib/issues/779">#779</a>)</li>
<li><a
href="https://github.com/pyinstaller/pyinstaller-hooks-contrib/commit/28151eae3bc6f026c26469e0960e4aad5d689b17"><code>28151ea</code></a>
Add hook for pydicom (<a
href="https://redirect.github.com/pyinstaller/pyinstaller-hooks-contrib/issues/776">#776</a>)</li>
<li><a
href="https://github.com/pyinstaller/pyinstaller-hooks-contrib/commit/3bec1611b2a49976973dc5e8b526cbd88b977c2e"><code>3bec161</code></a>
Scheduled weekly dependency update for week 31 (<a
href="https://redirect.github.com/pyinstaller/pyinstaller-hooks-contrib/issues/774">#774</a>)</li>
<li><a
href="https://github.com/pyinstaller/pyinstaller-hooks-contrib/commit/39e1cdd75f71a6b89c297f1f6ace9bb942a21020"><code>39e1cdd</code></a>
Add hook for tzwhere (<a
href="https://redirect.github.com/pyinstaller/pyinstaller-hooks-contrib/issues/771">#771</a>)</li>
<li><a
href="https://github.com/pyinstaller/pyinstaller-hooks-contrib/commit/c0d694c8b9b83fffb9d5d308e9ef6b851ca7179f"><code>c0d694c</code></a>
Scheduled weekly dependency update for week 30 (<a
href="https://redirect.github.com/pyinstaller/pyinstaller-hooks-contrib/issues/770">#770</a>)</li>
<li><a
href="https://github.com/pyinstaller/pyinstaller-hooks-contrib/commit/cd3e5e25247d4ae6225b2458872087a3557f1a62"><code>cd3e5e2</code></a>
Add hook for cmocean (<a
href="https://redirect.github.com/pyinstaller/pyinstaller-hooks-contrib/issues/769">#769</a>)</li>
<li>Additional commits viewable in <a
href="https://github.com/pyinstaller/pyinstaller-hooks-contrib/compare/2024.7...v2024.8">compare
view</a></li>
</ul>
</details>
<br />


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MONAI package
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