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In the Channel object in MDASequence, dimension decimation (acquire every n...) should be generalized to arbitrary axes. one possible (but not ideal) pattern:
classChannel:
...
decimate_axes: Dict[str, int]
offset_axes: Dict[str, int]
# e.g
{'config': 'DAPI', 'decimate_axes': {'t': 5}} # acquire DAPI every 5th frame
{'config': 'DAPI', 'decimate_axes': {'z': -1}} # or something like that ... e.g. don't acquire the full stack
{'config': 'DAPI', 'offset_axes': {'z': 0.5}} # focal shift of 0.5 in this channel
The text was updated successfully, but these errors were encountered:
as pointed out by @henrypinkard in micro-manager/pycro-manager#266 (comment),
In the
Channel
object inMDASequence
, dimension decimation (acquire every n...
) should be generalized to arbitrary axes. one possible (but not ideal) pattern:The text was updated successfully, but these errors were encountered: