-
Notifications
You must be signed in to change notification settings - Fork 258
Comparing changes
Open a pull request
base repository: pyro-ppl/numpyro
base: 0.15.0
head repository: pyro-ppl/numpyro
compare: 0.15.1
- 19 commits
- 109 files changed
- 10 contributors
Commits on May 14, 2024
-
Configuration menu - View commit details
-
Copy full SHA for 06d4e7b - Browse repository at this point
Copy the full SHA 06d4e7bView commit details -
Configuration menu - View commit details
-
Copy full SHA for b373831 - Browse repository at this point
Copy the full SHA b373831View commit details -
Add further entropy implementations. (#1800)
* Add entropy for `Independent`, `Expanded`, and `Delta` distributions. * Fix `__repr__` for `SineSkewed`. * Add entropy for `InverseGamma` distribution.
Configuration menu - View commit details
-
Copy full SHA for f572f2b - Browse repository at this point
Copy the full SHA f572f2bView commit details
Commits on May 28, 2024
-
Support multidimensional HSGP (numpyro.contrib.hsgp) (#1803)
* wip(hsgp_nd): add eigen_index function, allow m to take Sequence[int] wip(hsgp_nd): test list input for m, make dim required arg wip(hsgp_nd): support batched eigenfunctions, swap dims for m and d * wip(hsgp_nd): support/test n-d approximations * doc(hsgp_nd): format ordered lists doc(hsgp_nd): polish contrib documentation rm TODO fix eigenindices docstring cleanup nb * fix(hsgp_nd): make python 3.9 happy * fix(hsgp_nd): make linter happy (space between license and imports) * fix(stochastic_volatility): legendHandles -> legend_handles looks like matplotlib snuck in a deprecation here * test(hsgp_nd): add tests for `_convert_ell` and `eigenindices` * test(hsgp_nd): specific test for eq 10
Configuration menu - View commit details
-
Copy full SHA for e8216d7 - Browse repository at this point
Copy the full SHA e8216d7View commit details
Commits on Jun 1, 2024
-
Configuration menu - View commit details
-
Copy full SHA for 401e364 - Browse repository at this point
Copy the full SHA 401e364View commit details
Commits on Jun 10, 2024
-
fix(contrib.hsgp): convert matern spectral density from frequency dom…
…ain (#1811) * fix(contrib.hsgp): convert matern spectral density to angular frequency * add scikit-learn to test extras * fix matern spectral density docstring * test args from jnp.array -> np.array * add ARRAY_TYPE, python 3.9 compatible isinstance check
Configuration menu - View commit details
-
Copy full SHA for 0ba1306 - Browse repository at this point
Copy the full SHA 0ba1306View commit details
Commits on Jun 17, 2024
-
example: multidimensional HSGP (#1801)
* wip(hsgp_nd): initialize notebook with full gp and approx models wip(hsgp_nd): writeup results for baseline, add mcmc options wip(hsbp_nd): complete writeup docs(numpyro): add hsgp_nd_example wip(hsgp_nd): patch up example wip(hsgp_nd): cleanup/re-run nb wip(hsgp_nd): final cleanup * chore(hsgp_nd): ruff lint and fmt * fix(hsgp_nd): fix support comment * wip(hsgp_nd): debug delta between contrib and local implementations * example(hsgp_nd): rewrite docs to reference contrib module * example(hsgp_nd): clarify docs * add more verbiage and arviz plots * format and add trace plot for approximation * fix divergences * add numpyro install to top of nb
Configuration menu - View commit details
-
Copy full SHA for 40565d0 - Browse repository at this point
Copy the full SHA 40565d0View commit details
Commits on Jun 22, 2024
-
filter out tests waiting for next tfp release (#1817)
* filter oout tests waiting for next tfp release * add warning mathc * fix warnings * put warnings up * move warning to top init * use tree_map * ignore yet another test
Configuration menu - View commit details
-
Copy full SHA for 9785376 - Browse repository at this point
Copy the full SHA 9785376View commit details
Commits on Jun 23, 2024
-
Convert explicit looping to bit twiddling for nuts u-turn calculations (
#1818) * convert looping to twiddling * convert looping to twiddling
Configuration menu - View commit details
-
Copy full SHA for 0924135 - Browse repository at this point
Copy the full SHA 0924135View commit details -
Make figure in AR2 example reproducible (#1816)
* Add code to reproduce ar2 plot * use m_t for plot * make pre-commit happy * implement mean tracking for loop version * restore mean tracking in scan version
Configuration menu - View commit details
-
Copy full SHA for 491a0cd - Browse repository at this point
Copy the full SHA 491a0cdView commit details
Commits on Jun 24, 2024
-
Memory reduction fixes for MCMC sampler (#1802)
* memfixes * fix import * bugfix * wrap fn fix * remove rejit * fix format * fix compile behavior * fix parallel case * resolve map handling * fix stochastic_volatility * fix jit / dummy collection * fix cjit and donation * remove _body_fn_wrap
Configuration menu - View commit details
-
Copy full SHA for 616a811 - Browse repository at this point
Copy the full SHA 616a811View commit details
Commits on Jun 25, 2024
-
Less than eq constaint (#1822)
* chore: less than eq constraint * chore: unit tests for constraints and transforms
Configuration menu - View commit details
-
Copy full SHA for 209dad9 - Browse repository at this point
Copy the full SHA 209dad9View commit details -
Support vector lengthscales for RBF and Matern kernels (#1819)
* Support vector lengthscales for RBF and Matern kernels * Use broadcast_shapes to align params * Remove union shorthand * Update test/contrib/hsgp/test_approximation.py Co-authored-by: Juan Orduz <juanitorduz@gmail.com> * Run make format * Remove union in isinstance check --------- Co-authored-by: Sam Anklesaria <anklesaria@utexs.edu> Co-authored-by: Juan Orduz <juanitorduz@gmail.com>
Configuration menu - View commit details
-
Copy full SHA for 2984b9b - Browse repository at this point
Copy the full SHA 2984b9bView commit details
Commits on Jun 26, 2024
-
Update jax.tree_util.tree_map to jax.tree.map (#1821)
* update jax.tree_util.tree_foo to jax.tree.foo * bump minimal jax version to 0.4.25, which supports jax.tree * fix lint issues * also fix deprecation warning of using a_min, a_max in jnp.clip
Configuration menu - View commit details
-
Copy full SHA for 5af9ebd - Browse repository at this point
Copy the full SHA 5af9ebdView commit details
Commits on Jul 1, 2024
-
Fixes
random_flax_module
withflax.linen.BatchNorm
(#1823)* filter oout tests waiting for next tfp release * fix issue 1446 * add feddback (not working) * feedbackl 2 * default handler * rm prng_key from substitute * remove class from function
Configuration menu - View commit details
-
Copy full SHA for d40f0e9 - Browse repository at this point
Copy the full SHA d40f0e9View commit details -
Configuration menu - View commit details
-
Copy full SHA for f4e69eb - Browse repository at this point
Copy the full SHA f4e69ebView commit details -
Support UnpackTransform.inv via pack_fn (#1824)
* add pack_fn to UnpackTransform for inverse * better pack_fn
Configuration menu - View commit details
-
Copy full SHA for 2ed9f92 - Browse repository at this point
Copy the full SHA 2ed9f92View commit details
Commits on Jul 2, 2024
-
Allow to use NeuTra on models with plates (#1826)
* allow to use NeuTra with plate * Fix typo in reparam.py
Configuration menu - View commit details
-
Copy full SHA for 89ca117 - Browse repository at this point
Copy the full SHA 89ca117View commit details
Commits on Jul 11, 2024
-
Configuration menu - View commit details
-
Copy full SHA for f6eb6ce - Browse repository at this point
Copy the full SHA f6eb6ceView commit details
This comparison is taking too long to generate.
Unfortunately it looks like we can’t render this comparison for you right now. It might be too big, or there might be something weird with your repository.
You can try running this command locally to see the comparison on your machine:
git diff 0.15.0...0.15.1