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CHANGELOG.rst

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Changelog

This project adheres to Semantic Versioning.

1.13.0-SNAPSHOT (2021-06-07)

Added

Fixed

Dependencies

Deprecated

1.12.6 (2022-01-04)

Added

Fixed

  • CVE-2021-44832

Dependencies

  • org.apache.logging.log4j:log4j-core:2.17.0 -> 2.17.1
  • org.apache.logging.log4j:log4j-api:2.17.0 -> 2.17.1

Deprecated

1.12.5 (2021-12-20)

Added

Fixed

Dependencies

  • org.apache.logging.log4j 2.16.0 -> 2.17.0 (addresses CVE-2021-45105)

Deprecated

1.12.4 (2021-12-16)

Added

Fixed

Dependencies

  • org.apache.logging.log4j 2.15.0 -> 2.16.0 (addresses CVE-2021-45046)

Deprecated

1.12.3 (2021-11-13)

Added

Fixed

Dependencies

  • org.apache.logging.log4j 2.13.2 -> 2.15.0 (addresses CVE-2021-44228)

Deprecated

1.12.2 (2021-11-02)

Added

Fixed

Dependencies

  • com.vaadin:7.7.17 -> 7.7.28 (addresses CVE-2021-37714)

Deprecated

1.12.1 (2021-06-11)

Added

Fixed

  • Correctly replace selected vocabulary values for Cell Lysis in metabolomics import (#32)

Dependencies

Deprecated

1.12.0 (2021-06-07)

Added

  • Uses new database structure for persons: table "persons" is replaced by table "person" (#29)

Fixed

Dependencies

Deprecated

1.11.2 (2021-05-31)

Added

Fixed

  • Existing experiments are now correctly fetched when using the wizard process

Dependencies

Deprecated

1.11.1 (2021-05-27)

Added

  • Unit tests for adding barcodes to different import formats

Fixed

  • Barcodes are once again correctly added to the proteomics import format

Dependencies

Deprecated

1.11.0 (2021-05-20)

Added

  • Metabolomics import format
  • "QBiC" format has been renamed to openBIS-based format
  • "Standard" format has been renamed to "Standard QBiC format"

Fixed

  • Help/Examples symbols for import formats are now places directly next to the respective options
  • When importing multiple different formats, the project and experimental design are now correctly reset

Dependencies

Deprecated

1.10.1 (2021-02-02)

Added

Fixed

  • Use new experimental design lib, fixing handling of Peptide Cleanup (PTX import)
  • Fix: when replacing user inputs with vocabulary values in the uploaded file, special characters like brackets are now handled
  • Fix: importing into an existing project would sometimes fail to create new barcodes

Dependencies

Deprecated

1.10.0 (2021-02-02)

Added

  • Created the project using Qube

Fixed

Dependencies

Deprecated