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denoise-paired: add flag for just concatenating paired reads #93

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AstrobioMike opened this issue Apr 13, 2018 · 0 comments
Open

denoise-paired: add flag for just concatenating paired reads #93

AstrobioMike opened this issue Apr 13, 2018 · 0 comments
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enhancement

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@AstrobioMike
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AstrobioMike commented Apr 13, 2018 •
edited by Mestabrook3
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Improvement Description
Hi there!

The base dada2 R function for this is mergeReads() and it takes a logical argument for “justConcatenate” which by default is False, so to do this in R you just set that to true. But I don’t think that can be specified currently in qiime2’s implementation.

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Would it be difficult to add that capability?
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@benjjneb @AstrobioMike