You signed in with another tab or window. Reload to refresh your session.You signed out in another tab or window. Reload to refresh your session.You switched accounts on another tab or window. Reload to refresh your session.Dismiss alert
Addition Description
When creating a FeatureTable[Frequency] by mapping reads to reference genes, the resulting data is total amount of reads that mapped to a gene. With this data it is impossible to make comparisons inside a sample, because of different gene lengths and it is also impossible to make comparisons between samples because of different total amount of reads per sample. To solve this issue I propose a new type called FeatureTable[Normalized] that will be the output of a new action that can normalize FeatureTable[Frequency] artifacts. There will be properties that indicate the specific normalization method that was used.
Addition Description
When creating a FeatureTable[Frequency] by mapping reads to reference genes, the resulting data is total amount of reads that mapped to a gene. With this data it is impossible to make comparisons inside a sample, because of different gene lengths and it is also impossible to make comparisons between samples because of different total amount of reads per sample. To solve this issue I propose a new type called FeatureTable[Normalized] that will be the output of a new action that can normalize FeatureTable[Frequency] artifacts. There will be properties that indicate the specific normalization method that was used.
References
https://forum.qiime2.org/t/2024-07-03-group-meeting/30649/5
The text was updated successfully, but these errors were encountered: