Fix 3036 (#3041)

* Version 092020 (#3034)

* inject study_type in EBI and improvements to current automatic processing pipeline (#3023)

* inject study_type in ebi and improvements to current automatic proecssing pipeline

* addressing @ElDeveloper comments

* some general fixes/additions for next release (#3026)

* some general fixes/additions for next release

* adding test for not None job.release_validator_job

* fix #2839

* fix #2868 (#3028)

* fix #2868

* 2nd round

* fix errors

* more changes

* fix errors

* fix ProcessingJobTest

* fix PY_PATCH

* add missing TRN.add

* encapsulated_query -> perform_as_transaction

* fix #3022 (#3030)

* fix #3022

* adding tests

* fix #2320 (#3031)

* fix #2320

* adding prints to debug

* children -> 1

* APIArtifactHandlerTest -> APIArtifactHandlerTests

* configure_biom

* qdb.util.activate_or_update_plugins

* improving code

* almost there

* add values.template

* fix filepaths

* filepaths -> files

* fixing errors

* add prep.artifact insertion

* addressing @ElDeveloper comments

* fix artifact_definition active command

* != -> ==

* Added three tutorial sections to the Qiita documentation (#3032)

* Added three tutorial sections to the Qiita documentation: 'Retrieving Public Data for Own Analysis' and 'Processing public data retrieved with redbiom' to the redbiom tab, and 'Statistical Analysis to Justify Clinical Trial Sample Size Tutorial' to the analyzing samples tab.

* Update redbiom.rst

* Update redbiom.rst

* Update redbiom.rst

* Further updates to redbiom.rst and the Stats tutorial.

* update redbiom.rst

* Finished proof-reading

* Placed all three tutorials/sections together under Introduction to the download and analysis of public Qiita data

* added a new introduction, with links to the three sections

* Added figures to stats tutorial and contexts explanation

* Added figures to stats tutorial and contexts explanation

* Apply suggestions from code review [skip ci]

Co-authored-by: Yoshiki Vázquez Baeza <yoshiki@ucsd.edu>

Co-authored-by: Antonio Gonzalez <antgonza@gmail.com>
Co-authored-by: Yoshiki Vázquez Baeza <yoshiki@ucsd.edu>

* 092020 (#3033)

* 092020

* connect artifact with job

* rm INSERT qiita.artifact_processing_job

* Apply suggestions from code review [skip ci]

Co-authored-by: Yoshiki Vázquez Baeza <yoshiki@ucsd.edu>

Co-authored-by: Yoshiki Vázquez Baeza <yoshiki@ucsd.edu>

Co-authored-by: Daniel McDonald <danielmcdonald@ucsd.edu>
Co-authored-by: Mirte Kuijpers <67341505+mcmk3@users.noreply.github.com>
Co-authored-by: Yoshiki Vázquez Baeza <yoshiki@ucsd.edu>

* fix #3036

Co-authored-by: Daniel McDonald <danielmcdonald@ucsd.edu>
Co-authored-by: Mirte Kuijpers <67341505+mcmk3@users.noreply.github.com>
Co-authored-by: Yoshiki Vázquez Baeza <yoshiki@ucsd.edu>

Author: 4 people

qiita_pet/static/js/networkVue.js

@@ -1011,6 +1011,7 @@ Vue.component('processing-graph', {
 
           // At this point we can show the graph and hide the job list
           $("#processing-network-div").show();
+          $("#show-hide-network-btn").show();
           $("#processing-job-div").hide();
         }
       })
@@ -1035,6 +1036,7 @@ Vue.component('processing-graph', {
       $.get(vm.portal + vm.jobsEndpoint, function(data) {
         $("#processing-job-div").html("");
         $("#processing-job-div").append("<p>Hang tight, we are processing your request: </p>");
+        $("#show-hide-network-btn").hide();
         var nonCompletedJobs = 0;
         var successJobs = 0;
         var totalJobs = 0;