packages.bib

@Manual{R-base,
  title = {R: A Language and Environment for Statistical Computing},
  author = {{R Core Team}},
  organization = {R Foundation for Statistical Computing},
  address = {Vienna, Austria},
  year = {2019},
  url = {https://www.R-project.org/},
}
@Manual{R-bookdown,
  title = {bookdown: Authoring Books and Technical Documents with R Markdown},
  author = {Yihui Xie},
  year = {2020},
  note = {R package version 0.18},
  url = {https://CRAN.R-project.org/package=bookdown},
}
@Manual{R-classInt,
  title = {classInt: Choose Univariate Class Intervals},
  author = {Roger Bivand},
  year = {2019},
  note = {R package version 0.4-2},
  url = {https://CRAN.R-project.org/package=classInt},
}
@Manual{R-countrycode,
  title = {countrycode: Convert Country Names and Country Codes},
  author = {Vincent Arel-Bundock},
  year = {2020},
  note = {R package version 1.1.1},
  url = {https://CRAN.R-project.org/package=countrycode},
}
@Manual{R-dplyr,
  title = {dplyr: A Grammar of Data Manipulation},
  author = {Hadley Wickham and Romain François and Lionel Henry and Kirill Müller},
  year = {2020},
  note = {R package version 0.8.5},
  url = {https://CRAN.R-project.org/package=dplyr},
}
@Manual{R-DT,
  title = {DT: A Wrapper of the JavaScript Library 'DataTables'},
  author = {Yihui Xie and Joe Cheng and Xianying Tan},
  year = {2020},
  note = {R package version 0.12},
  url = {https://CRAN.R-project.org/package=DT},
}
@Manual{R-fitdistrplus,
  title = {fitdistrplus: Help to Fit of a Parametric Distribution to Non-Censored or
Censored Data},
  author = {Marie-Laure Delignette-Muller and Christophe Dutang and Aurelie Siberchicot},
  year = {2019},
  note = {R package version 1.0-14},
  url = {https://CRAN.R-project.org/package=fitdistrplus},
}
@Manual{R-forcats,
  title = {forcats: Tools for Working with Categorical Variables (Factors)},
  author = {Hadley Wickham},
  year = {2020},
  note = {R package version 0.5.0},
  url = {https://CRAN.R-project.org/package=forcats},
}
@Manual{R-GADMTools,
  title = {GADMTools: Easy Use of 'GADM' Maps},
  author = {Jean Pierre Decorps},
  year = {2020},
  note = {R package version 3.8-1},
  url = {https://CRAN.R-project.org/package=GADMTools},
}
@Manual{R-gghighlight,
  title = {gghighlight: Highlight Lines and Points in 'ggplot2'},
  author = {Hiroaki Yutani},
  year = {2020},
  note = {R package version 0.2.0},
  url = {https://CRAN.R-project.org/package=gghighlight},
}
@Manual{R-ggplot2,
  title = {ggplot2: Create Elegant Data Visualisations Using the Grammar of Graphics},
  author = {Hadley Wickham and Winston Chang and Lionel Henry and Thomas Lin Pedersen and Kohske Takahashi and Claus Wilke and Kara Woo and Hiroaki Yutani and Dewey Dunnington},
  year = {2020},
  note = {R package version 3.3.0},
  url = {https://CRAN.R-project.org/package=ggplot2},
}
@Manual{R-ggridges,
  title = {ggridges: Ridgeline Plots in 'ggplot2'},
  author = {Claus O. Wilke},
  year = {2020},
  note = {R package version 0.5.2},
  url = {https://CRAN.R-project.org/package=ggridges},
}
@Manual{R-jsonlite,
  title = {jsonlite: A Robust, High Performance JSON Parser and Generator for R},
  author = {Jeroen Ooms},
  year = {2020},
  note = {R package version 1.6.1},
  url = {https://CRAN.R-project.org/package=jsonlite},
}
@Manual{R-knitr,
  title = {knitr: A General-Purpose Package for Dynamic Report Generation in R},
  author = {Yihui Xie},
  year = {2020},
  note = {R package version 1.28},
  url = {https://CRAN.R-project.org/package=knitr},
}
@Manual{R-lsei,
  title = {lsei: Solving Least Squares or Quadratic Programming Problems under
Equality/Inequality Constraints},
  author = {Yong Wang and Charles L. Lawson and Richard J. Hanson},
  year = {2017},
  note = {R package version 1.2-0},
  url = {https://CRAN.R-project.org/package=lsei},
}
@Manual{R-lubridate,
  title = {lubridate: Make Dealing with Dates a Little Easier},
  author = {Vitalie Spinu and Garrett Grolemund and Hadley Wickham},
  year = {2020},
  note = {R package version 1.7.8},
  url = {https://CRAN.R-project.org/package=lubridate},
}
@Manual{R-MASS,
  title = {MASS: Support Functions and Datasets for Venables and Ripley's MASS},
  author = {Brian Ripley},
  year = {2019},
  note = {R package version 7.3-51.5},
  url = {https://CRAN.R-project.org/package=MASS},
}
@Manual{R-npsurv,
  title = {npsurv: Nonparametric Survival Analysis},
  author = {Yong Wang},
  year = {2017},
  note = {R package version 0.4-0},
  url = {https://CRAN.R-project.org/package=npsurv},
}
@Manual{R-patchwork,
  title = {patchwork: The Composer of Plots},
  author = {Thomas Lin Pedersen},
  year = {2019},
  note = {R package version 1.0.0},
  url = {https://CRAN.R-project.org/package=patchwork},
}
@Manual{R-purrr,
  title = {purrr: Functional Programming Tools},
  author = {Lionel Henry and Hadley Wickham},
  year = {2020},
  note = {R package version 0.3.4},
  url = {https://CRAN.R-project.org/package=purrr},
}
@Manual{R-R0,
  title = {R0: Estimation of R0 and Real-Time Reproduction Number from
Epidemics},
  author = {Pierre-Yves Boelle and Thomas Obadia},
  year = {2015},
  note = {R package version 1.2-6},
  url = {https://CRAN.R-project.org/package=R0},
}
@Manual{R-readr,
  title = {readr: Read Rectangular Text Data},
  author = {Hadley Wickham and Jim Hester and Romain Francois},
  year = {2018},
  note = {R package version 1.3.1},
  url = {https://CRAN.R-project.org/package=readr},
}
@Manual{R-rgdal,
  title = {rgdal: Bindings for the 'Geospatial' Data Abstraction Library},
  author = {Roger Bivand and Tim Keitt and Barry Rowlingson},
  year = {2019},
  note = {R package version 1.4-8},
  url = {https://CRAN.R-project.org/package=rgdal},
}
@Manual{R-rmarkdown,
  title = {rmarkdown: Dynamic Documents for R},
  author = {JJ Allaire and Yihui Xie and Jonathan McPherson and Javier Luraschi and Kevin Ushey and Aron Atkins and Hadley Wickham and Joe Cheng and Winston Chang and Richard Iannone},
  year = {2020},
  note = {R package version 2.1},
  url = {https://CRAN.R-project.org/package=rmarkdown},
}
@Manual{R-sandwich,
  title = {sandwich: Robust Covariance Matrix Estimators},
  author = {Achim Zeileis and Thomas Lumley},
  year = {2019},
  note = {R package version 2.5-1},
  url = {https://CRAN.R-project.org/package=sandwich},
}
@Manual{R-scales,
  title = {scales: Scale Functions for Visualization},
  author = {Hadley Wickham and Dana Seidel},
  year = {2019},
  note = {R package version 1.1.0},
  url = {https://CRAN.R-project.org/package=scales},
}
@Manual{R-sf,
  title = {sf: Simple Features for R},
  author = {Edzer Pebesma},
  year = {2020},
  note = {R package version 0.8-1},
  url = {https://CRAN.R-project.org/package=sf},
}
@Manual{R-sp,
  title = {sp: Classes and Methods for Spatial Data},
  author = {Edzer Pebesma and Roger Bivand},
  year = {2019},
  note = {R package version 1.3-2},
  url = {https://CRAN.R-project.org/package=sp},
}
@Manual{R-stringr,
  title = {stringr: Simple, Consistent Wrappers for Common String Operations},
  author = {Hadley Wickham},
  year = {2019},
  note = {R package version 1.4.0},
  url = {https://CRAN.R-project.org/package=stringr},
}
@Manual{R-strucchange,
  title = {strucchange: Testing, Monitoring, and Dating Structural Changes},
  author = {Achim Zeileis and Friedrich Leisch and Kurt Hornik and Christian Kleiber},
  year = {2019},
  note = {R package version 1.5-2},
  url = {https://CRAN.R-project.org/package=strucchange},
}
@Manual{R-survival,
  title = {survival: Survival Analysis},
  author = {Terry M Therneau},
  year = {2019},
  note = {R package version 3.1-8},
  url = {https://CRAN.R-project.org/package=survival},
}
@Manual{R-tibble,
  title = {tibble: Simple Data Frames},
  author = {Kirill Müller and Hadley Wickham},
  year = {2020},
  note = {R package version 3.0.1},
  url = {https://CRAN.R-project.org/package=tibble},
}
@Manual{R-tidyr,
  title = {tidyr: Tidy Messy Data},
  author = {Hadley Wickham and Lionel Henry},
  year = {2020},
  note = {R package version 1.0.2},
  url = {https://CRAN.R-project.org/package=tidyr},
}
@Manual{R-tidyverse,
  title = {tidyverse: Easily Install and Load the 'Tidyverse'},
  author = {Hadley Wickham},
  year = {2020},
  note = {http://tidyverse.tidyverse.org,
https://github.com/tidyverse/tidyverse},
}
@Manual{R-tsibble,
  title = {tsibble: Tidy Temporal Data Frames and Tools},
  author = {Earo Wang and Di Cook and Rob Hyndman and Mitchell O'Hara-Wild},
  year = {2020},
  note = {R package version 0.8.6},
  url = {https://CRAN.R-project.org/package=tsibble},
}
@Manual{R-USAboundaries,
  title = {USAboundaries: Historical and Contemporary Boundaries of the United States of
America},
  author = {Lincoln Mullen and Jordan Bratt},
  year = {2018},
  note = {R package version 0.3.1},
  url = {https://CRAN.R-project.org/package=USAboundaries},
}
@Manual{R-usmap,
  title = {usmap: US Maps Including Alaska and Hawaii},
  author = {Paolo {Di Lorenzo}},
  year = {2019},
  note = {R package version 0.5.0},
  url = {https://CRAN.R-project.org/package=usmap},
}
@Manual{R-WikidataR,
  title = {WikidataR: API Client Library for 'Wikidata'},
  author = {Oliver Keyes and Serena Signorelli and Christian Graul and Mikhail Popov},
  year = {2017},
  note = {R package version 1.4.0},
  url = {https://CRAN.R-project.org/package=WikidataR},
}
@Manual{R-zoo,
  title = {zoo: S3 Infrastructure for Regular and Irregular Time Series (Z's
Ordered Observations)},
  author = {Achim Zeileis and Gabor Grothendieck and Jeffrey A. Ryan},
  year = {2020},
  note = {R package version 1.8-7},
  url = {https://CRAN.R-project.org/package=zoo},
}
@Book{bookdown2016,
  title = {bookdown: Authoring Books and Technical Documents with {R} Markdown},
  author = {Yihui Xie},
  publisher = {Chapman and Hall/CRC},
  address = {Boca Raton, Florida},
  year = {2016},
  note = {ISBN 978-1138700109},
  url = {https://github.com/rstudio/bookdown},
}
@Article{countrycode2018,
  title = {countrycode: An R package to convert country names and country codes},
  author = {Vincent Arel-Bundock and Nils Enevoldsen and CJ Yetman},
  journal = {Journal of Open Source Software},
  year = {2018},
  volume = {3},
  number = {28},
  pages = {848},
  url = {https://doi.org/10.21105/joss.00848},
}
@Article{fitdistrplus2015,
  title = {{fitdistrplus}: An {R} Package for Fitting Distributions},
  author = {Marie Laure Delignette-Muller and Christophe Dutang},
  journal = {Journal of Statistical Software},
  year = {2015},
  volume = {64},
  number = {4},
  pages = {1--34},
  url = {http://www.jstatsoft.org/v64/i04/},
}
@Book{ggplot22016,
  author = {Hadley Wickham},
  title = {ggplot2: Elegant Graphics for Data Analysis},
  publisher = {Springer-Verlag New York},
  year = {2016},
  isbn = {978-3-319-24277-4},
  url = {https://ggplot2.tidyverse.org},
}
@Article{jsonlite2014,
  title = {The jsonlite Package: A Practical and Consistent Mapping Between JSON Data and R Objects},
  author = {Jeroen Ooms},
  journal = {arXiv:1403.2805 [stat.CO]},
  year = {2014},
  url = {https://arxiv.org/abs/1403.2805},
}
@Book{knitr2015,
  title = {Dynamic Documents with {R} and knitr},
  author = {Yihui Xie},
  publisher = {Chapman and Hall/CRC},
  address = {Boca Raton, Florida},
  year = {2015},
  edition = {2nd},
  note = {ISBN 978-1498716963},
  url = {https://yihui.org/knitr/},
}
@InCollection{knitr2014,
  booktitle = {Implementing Reproducible Computational Research},
  editor = {Victoria Stodden and Friedrich Leisch and Roger D. Peng},
  title = {knitr: A Comprehensive Tool for Reproducible Research in {R}},
  author = {Yihui Xie},
  publisher = {Chapman and Hall/CRC},
  year = {2014},
  note = {ISBN 978-1466561595},
  url = {http://www.crcpress.com/product/isbn/9781466561595},
}
@Article{lubridate2011,
  title = {Dates and Times Made Easy with {lubridate}},
  author = {Garrett Grolemund and Hadley Wickham},
  journal = {Journal of Statistical Software},
  year = {2011},
  volume = {40},
  number = {3},
  pages = {1--25},
  url = {http://www.jstatsoft.org/v40/i03/},
}
@Book{MASS2002,
  title = {Modern Applied Statistics with S},
  author = {W. N. Venables and B. D. Ripley},
  publisher = {Springer},
  edition = {Fourth},
  address = {New York},
  year = {2002},
  note = {ISBN 0-387-95457-0},
  url = {http://www.stats.ox.ac.uk/pub/MASS4},
}
@Book{rmarkdown2018,
  title = {R Markdown: The Definitive Guide},
  author = {Yihui Xie and J.J. Allaire and Garrett Grolemund},
  publisher = {Chapman and Hall/CRC},
  address = {Boca Raton, Florida},
  year = {2018},
  note = {ISBN 9781138359338},
  url = {https://bookdown.org/yihui/rmarkdown},
}
@Article{sandwich2004,
  title = {Econometric Computing with {HC} and {HAC} Covariance Matrix Estimators},
  author = {Achim Zeileis},
  journal = {Journal of Statistical Software},
  year = {2004},
  volume = {11},
  number = {10},
  pages = {1--17},
  doi = {10.18637/jss.v011.i10},
}
@Article{sandwich2006,
  title = {Object-Oriented Computation of Sandwich Estimators},
  author = {Achim Zeileis},
  journal = {Journal of Statistical Software},
  year = {2006},
  volume = {16},
  number = {9},
  pages = {1--16},
  doi = {10.18637/jss.v016.i09},
}
@TechReport{sandwich2017,
  title = {Various Versatile Variances: An Object-Oriented Implementation of Clustered Covariances in {R}},
  author = {Susanne Berger and Nathaniel Graham and Achim Zeileis},
  institution = {Working Papers in Economics and Statistics, Research Platform Empirical and Experimental Economics, Universit\"at Innsbruck},
  year = {2017},
  type = {Working Paper},
  number = {2017-12},
  month = {July},
  url = {http://EconPapers.RePEc.org/RePEc:inn:wpaper:2017-12},
}
@Article{sf2018,
  author = {Edzer Pebesma},
  title = {{Simple Features for R: Standardized Support for Spatial Vector Data}},
  year = {2018},
  journal = {{The R Journal}},
  doi = {10.32614/RJ-2018-009},
  url = {https://doi.org/10.32614/RJ-2018-009},
  pages = {439--446},
  volume = {10},
  number = {1},
}
@Article{sp2005,
  author = {Edzer J. Pebesma and Roger S. Bivand},
  title = {Classes and methods for spatial data in {R}},
  journal = {R News},
  year = {2005},
  volume = {5},
  number = {2},
  pages = {9--13},
  month = {November},
  url = {https://CRAN.R-project.org/doc/Rnews/},
}
@Book{sp2013,
  author = {Roger S. Bivand and Edzer Pebesma and Virgilio Gomez-Rubio},
  title = {Applied spatial data analysis with {R}, Second edition},
  year = {2013},
  publisher = {Springer, NY},
  url = {http://www.asdar-book.org/},
}
@Article{strucchange2002,
  title = {strucchange: An R Package for Testing
                  for Structural Change in Linear Regression Models},
  author = {Achim Zeileis and Friedrich Leisch and Kurt Hornik and Christian Kleiber},
  journal = {Journal of Statistical Software},
  year = {2002},
  volume = {7},
  number = {2},
  pages = {1--38},
  url = {http://www.jstatsoft.org/v07/i02/},
}
@Article{strucchange2003,
  title = {Testing and Dating of Structural Changes in Practice},
  author = {Achim Zeileis and Christian Kleiber and Walter Kr\"amer and Kurt Hornik},
  journal = {Computational Statistics \& Data Analysis},
  year = {2003},
  volume = {44},
  pages = {109--123},
}
@Article{strucchange2006,
  title = {Implementing a Class of Structural Change Tests: An Econometric Computing Approach},
  author = {Achim Zeileis},
  journal = {Computational Statistics \& Data Analysis},
  year = {2006},
  volume = {50},
  pages = {2987--3008},
}
@Manual{survival-package,
  title = {A Package for Survival Analysis in S},
  author = {Terry M Therneau},
  year = {2015},
  note = {version 2.38},
  url = {https://CRAN.R-project.org/package=survival},
}
@Book{survival-book,
  title = {Modeling Survival Data: Extending the {C}ox Model},
  author = {{Terry M. Therneau} and {Patricia M. Grambsch}},
  year = {2000},
  publisher = {Springer},
  address = {New York},
  isbn = {0-387-98784-3},
}
@Article{tidyverse2019,
  title = {Welcome to the {tidyverse}},
  author = {Hadley Wickham and Mara Averick and Jennifer Bryan and Winston Chang and Lucy D'Agostino McGowan and Romain François and Garrett Grolemund and Alex Hayes and Lionel Henry and Jim Hester and Max Kuhn and Thomas Lin Pedersen and Evan Miller and Stephan Milton Bache and Kirill Müller and Jeroen Ooms and David Robinson and Dana Paige Seidel and Vitalie Spinu and Kohske Takahashi and Davis Vaughan and Claus Wilke and Kara Woo and Hiroaki Yutani},
  year = {2019},
  journal = {Journal of Open Source Software},
  volume = {4},
  number = {43},
  pages = {1686},
  doi = {10.21105/joss.01686},
}
@Article{tsibble2020,
  author = {Earo Wang and Dianne Cook and Rob J Hyndman},
  title = {A new tidy data structure to support exploration and modeling of temporal data},
  journal = {Journal of Computational and Graphical Statistics},
  year = {2020},
  doi = {10.1080/10618600.2019.1695624},
  url = {https://doi.org/10.1080/10618600.2019.1695624},
}
@Article{USAboundaries2018,
  title = {{USAboundaries}: Historical and Contemporary Boundaries
of the United States of America},
  author = {Lincoln A. Mullen and Jordan Bratt},
  journal = {Journal of Open Source Software},
  year = {2018},
  volume = {3},
  issue = {23},
  pages = {314},
  url = {https://doi.org/10.21105/joss.00314},
  doi = {10.21105/joss.00314},
}
@Article{zoo2005,
  title = {zoo: S3 Infrastructure for Regular and Irregular Time Series},
  author = {Achim Zeileis and Gabor Grothendieck},
  journal = {Journal of Statistical Software},
  year = {2005},
  volume = {14},
  number = {6},
  pages = {1--27},
  doi = {10.18637/jss.v014.i06},
}