DESCRIPTION

Package: deconvSeq
Title: Cell Type Deconvolution for RNA Sequencing and Bisulfite Sequencing
Version: 0.3.0
Date: 2020-08-16
Authors@R: c(person("Rose", "Du", email = "rdu@bwh.harvard.edu", role = c("aut", "cre")),person("Vince", "Carey", email = "stvjc@channing.harvard.edu", role = c("aut")), person("Scott","Weiss", email = "restw@channing.harvard.edu", role = c("aut")))
Author: Rose Du [aut, cre], Vince Carey [aut], Scott Weiss [aut]
Maintainer: Rose Du <rdu@bwh.harvard.edu>
Description: Uses cell type deconvolution for RNA sequencing and bisulfite sequencing data to obtain cell type mixture in tissues. Citation: Du R, Carey V, and Weiss ST (2019) <doi:10.1093/bioinformatics/btz444>.
Depends: R (>= 3.5.0)
biocViews: 
Imports: edgeR,  MASS,  stats, lme4, biomaRt, Rsolnp, psych, Rmisc, methylKit,  SummarizedExperiment, utils, SingleCellExperiment, scater, scran
License: GPL-3
LazyData: true
RoxygenNote: 7.1.0
Roxygen: list(markdown = TRUE)
Suggests: knitr,rmarkdown
VignetteBuilder: knitr
Encoding: UTF-8