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[ppi] Interaction mode not compatible with all protocols yet #72

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SebieF opened this issue Mar 4, 2023 · 0 comments
Open
2 tasks

[ppi] Interaction mode not compatible with all protocols yet #72

SebieF opened this issue Mar 4, 2023 · 0 comments
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enhancement New feature or request

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@SebieF
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SebieF commented Mar 4, 2023 •
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The ppi interaction mode is not yet compatible with all protocols yet. sequence_to_class have been tested throughout. Other per-sequence protocols should work as well. However, for per-residue tasks (residue_to_class), changes have to be made to the architecture and handling of embeddings for interactions. For residues_to_class needs testing how the interaction mode can be applied to the LightAttention architecture.

Tasks:

  • residue_to_class (Implementing/Testing)
  • residues_to_class (Implementing/Testing)
@SebieF SebieF added the enhancement New feature or request label Mar 4, 2023
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