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Do a sanity check of the inferencer module #83

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SebieF opened this issue Jun 30, 2023 · 0 comments
Open

Do a sanity check of the inferencer module #83

SebieF opened this issue Jun 30, 2023 · 0 comments
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good first issue Good for newcomers testing Related to automated tests

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@SebieF
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SebieF commented Jun 30, 2023

Predictions for a secondary structure model (dataset) should about match those from the prottrans paper.

This could also be used to create a new test for the inferencer module with pre-calculated embeddings.

Another option would be to add a complete end-2-end test, using the same configuration as for the secondary structure prediction, but using one_hot_encoding embeddings for the test for performance issues.

@SebieF SebieF added good first issue Good for newcomers testing Related to automated tests labels Jun 30, 2023
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Labels
good first issue Good for newcomers testing Related to automated tests
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