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In VCF 4.3 specification in the first example the line ##source=myImputationProgramV3.1
is mentioned, but I cannot find this ##source field described anywhere in the document.
Is it a non official field ?
I think it should be either explained or removed from the example.
The text was updated successfully, but these errors were encountered:
tcezard
changed the title
clarify what ##source is suppose to represent
Clarify what ##source is suppose to represent
Aug 19, 2021
The source is not required at the moment. In the example is in silico source i.e. program. but for example if the caller is detecting somatic variants in cancerous tissue the source would indicate the details of the tissue source.
I think we could clarify in the example that ##source is an example of a program specific unstructured header line which is allowed but not defined in the spec.
In VCF 4.3 specification in the first example the line
##source=myImputationProgramV3.1
is mentioned, but I cannot find this
##source
field described anywhere in the document.Is it a non official field ?
I think it should be either explained or removed from the example.
The text was updated successfully, but these errors were encountered: