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SCIFIO reader broken in 2.89.1 #444

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karlduderstadt opened this issue Sep 23, 2022 · 1 comment
Closed

SCIFIO reader broken in 2.89.1 #444

karlduderstadt opened this issue Sep 23, 2022 · 1 comment

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@karlduderstadt
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After updating to the new scijava-common, I am unable to use our SCIFIO reader written for Micromanager (https://github.com/duderstadt-lab/mars-scifio). When trying to open image or the metadata.txt file using File>Open... in Fiji, I get the error below:
Screenshot 2022-09-23 at 15 50 44

I will continue to investigate. Basically, we can't open any of our data with SCIFIO with the changes in scijava-common.
@karlduderstadt
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karlduderstadt commented Sep 23, 2022 •
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To reproduce you can also turn SCIFIO on and try to open a TIF. I get the same error.

With SCIFIO off, I don't get the error. Maybe all SCIFIO readers are now broken?

At least, I consistently seems to get this error using File>Open... in Fiji with SCIFIO turned on. Drag and drop of files is still working correctly.

@hinerm hinerm closed this as completed in 20dcf58 Sep 23, 2022
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@karlduderstadt