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Added Pipe functionality #722

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Added Pipe functionality #722

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srivarra
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@srivarra srivarra commented Oct 2, 2024

closes #695.

Adds the ability to pipe functions with SpatialData. Added an example within the documentation based on those in Pandas and Xarray.

Adjusted docs/conf.py with the sphinx plot directive based on Scanpy's.

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codecov bot commented Oct 2, 2024

Codecov Report

All modified and coverable lines are covered by tests ✅

Project coverage is 91.86%. Comparing base (774b492) to head (c0af5d9).
Report is 8 commits behind head on main.

Additional details and impacted files
@@            Coverage Diff             @@
##             main     #722      +/-   ##
==========================================
+ Coverage   91.83%   91.86%   +0.03%     
==========================================
  Files          44       45       +1     
  Lines        6781     6892     +111     
==========================================
+ Hits         6227     6331     +104     
- Misses        554      561       +7     
Files with missing lines Coverage Δ
src/spatialdata/_core/spatialdata.py 90.98% <100.00%> (+0.09%) ⬆️

... and 9 files with indirect coverage changes

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srivarra commented Oct 2, 2024

@LucaMarconato Let me know your thoughts.

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Amazing! 🤩 Thanks for the PR, we are working on a release now but I will review it right after.

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Adding .pipe to SpatialData
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