tf_2dunet Erorr

[omnyaatef22]

trying to initialize the plan but I can't

[itrushkin]

Hi @omnyaatef22. Thank you for your interest in OpenFL!

Because of legal restriction of BraTS dataset, tf_2dunet workspace requires data to be already on the device. If you have the data locally, could you provide directory tree of the dataset?
You can do it via executing:

sudo apt-get install tree
tree -L 2 path/to/data/MICCAI_BraTS_2019_Data_Training/HGG # replace with your location

UPD: The code above works on Ubuntu system, but you can try using any Windows alternative you prefer.

[omnyaatef22]

[omnyaatef22]

i think the exception is here

[itrushkin]

@omnyaatef22 Your directory tree looks correct. The error tells that there are no sub-folders in the specified data_path. Path listed in tree command is not the path specified in the error. This could be a mistake.

[omnyaatef22]

There are no mistakes. It's just that the screenshots were taken from 2 different attempts with two copies of the dataset in different folders in each attempt. Here are screenshots from the same attempt with the same error as before.

[itrushkin]

@omnyaatef22 However, the error indicates that there are no images in the specified directory or there was an error during reading them.
Could you please execute the command in debug mode for more details?

fx -l DEBUG plan initialize

and attach the resulting output.
Also, just in case, could you share a deeper directory tree?

[omnyaatef22]

![2](https://user-images.githubusercontent.com/98268106/162171943-67dd740a-2740-47a8-8c

49-cd53ee9e0cbf.PNG)

[omnyaatef22]

template file

[omnyaatef22]