DESCRIPTION

Package: FuSViz
Title: Visualization tool for structure variations (SVs) and fusion genes/transcripts.
Version: 1.7.0
Author@R: c(
    person("Sen", "ZHAO", email = "t.cytotoxic@gmail.com", role = c("aut", "cre")))
Maintainer: Sen ZHAO <t.cytotoxic@gmail.com>
URL: https://github.com/senzhaocode/FuSViz
BugReports: https://github.com/senzhaocode/FuSViz/issues
Description: Web-based application to provide multiple solutions for visualizing, illustrating and intepretating SVs and fusions using DNA-seq and/or RNA-seq data.
License: GPL-2
Encoding: UTF-8
LazyData: true
Roxygen: list(markdown = TRUE)
RoxygenNote: 7.2.0
biocViews: 
Depends:
    R (>= 4.0.0),
    grid
Imports:
    xml2,
    jsonlite,
    htmlwidgets (>= 1.6.2),
    data.table,
    Gviz (>= 1.44.0),
    GenomicFeatures (>= 1.52.0),
    AnnotationDbi,
    GenomicRanges,
    IRanges,
    S4Vectors,
    GenomicAlignments,
    Rsamtools,
    Biostrings,
    shiny (>= 1.7.0),
    shinyWidgets (>= 0.8.0),
    shinydashboard (>= 0.7.2),
    shinycssloaders (>= 1.0.0),
    DT (>= 0.30),
    BioCircos (>= 0.3.4),
    visNetwork (>= 2.1.2),
    igraph (>= 1.6.0),
    datamods,
    wordcloud2
Remotes: github::lchiffon/wordcloud2