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Nucleosome Occupancy

Program to find the nucleosome occupancy within the given CHIP - loci range and to align the nucleosomes within 0-1999 with Transcriptional start site on the 1000th position.

Usage

Python libraries to be imported

import pandas import numpy

Input

Nucleosome positions and transcription factor binding sites with chromosome number, start positions and end positions

Output

Number of nucleosomes at each of the 0-2000 position of transcription factor binding sites

Command to run this program

python3 nucleosome_occupancy.py