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neural_networks folder: Train RNN and LSTM neural net on a path integration task and get the ratemaps of hidden neurons
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tda folder: Notebooks to test and compare TDA libraries on the ratemaps
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utils folder: Utility functions for maniupalting the data
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gridness folder: evaluate gridness, review of methods used in literature and experiments with TDA tecniques
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clustering folder: apply TDA to cluster ratemaps based on topological features
- Distance matrix comparison: comparison of distance matrices between persistence diagrams, based on diffent metrics
- Clustering visualization: visualization of clustering based on hierarchical techniques.