fix: use derived input for star_index #81
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the file path for the -sjdbGTFfile parameter was hardcoded to 'resources/genome.gtf' which causes execution to fail due to missing files on remote execution environments without a shared filesystem (such as kubernetes) This derives the filepath correctly from the input property to fix this issue
dlaehnemann
approved these changes
Jun 5, 2024
|
Thanks again, @bilalshaikh42. I just fixed the formatting and merged this, it is now released with the version tag |
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the file path for the -sjdbGTFfile parameter was hardcoded to 'resources/genome.gtf' which causes execution to fail due to missing files on remote execution environments without a shared filesystem (such as kubernetes)
This derives the filepath correctly from the input property to fix this issue