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I want to cluster a large dataset of DNA sequences. Must I first convert my fasta file into a DB format file? As is written here: https://github.com/soedinglab/MMseqs2/wiki#linclust, or can I use my fasta file directly? As is written here on the GitHub page.
What is the best approach here?
Kind regards,
Marlies
The text was updated successfully, but these errors were encountered:
You can use mmseqs easy-linclust with FASTA file, or convert your FASTA file into a DB file by mmseqs createdb and then cluster it by mmseqs linclust .
Hi,
I want to cluster a large dataset of DNA sequences. Must I first convert my fasta file into a DB format file? As is written here: https://github.com/soedinglab/MMseqs2/wiki#linclust, or can I use my fasta file directly? As is written here on the GitHub page.
What is the best approach here?
Kind regards,
Marlies
The text was updated successfully, but these errors were encountered: