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test.yaml
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name: tests
on:
pull_request:
workflow_dispatch:
concurrency:
group: ${{ github.workflow }}-${{ github.ref }}
cancel-in-progress: true
defaults:
run:
shell: bash -leo pipefail {0}
env:
PYSYN_CDBS: /tmp/trds
jref: https://ssb.stsci.edu/trds_open/jref
lref: https://ssb.stsci.edu/cdbs/lref
CRDS_PATH: /tmp/crds_cache
CRDS_CLIENT_RETRY_COUNT: 3
CRDS_CLIENT_RETRY_DELAY_SECONDS: 20
LD_LIBRARY_PATH: /usr/local/lib
jobs:
build:
uses: ./.github/workflows/build.yaml
crds-contexts:
uses: spacetelescope/crds/.github/workflows/contexts.yml@4c82b705635e6bab73a577bfe89e6fc71f40b62d # 12.0.5
test_installed:
needs: [ build, crds-contexts ]
strategy:
fail-fast: false
matrix:
package: [ acstools, asdf, ccdproc, costools, jwst, reftools, synphot, wfpc2tools ]
# the macOS 13 runner is on Intel hardware
runs-on: [ ubuntu-latest, macos-13, macos-latest ]
python-version: [ '3.10', '3.11', '3.12' ]
include:
- package: acstools
test-extras: test
pytest-args: --remote-data -v
- package: asdf
test-extras: tests
pytest-args: --remote-data --durations=10
- package: ccdproc
test-extras: test
pytest-args: -W ignore
- package: costools
test-extras: test
- package: jwst
test-extras: test
crds-observatory: jwst
# - package: pysynphot
# test-dependencies: >-
# pytest
# pytest-remotedata
- package: reftools
test-dependencies: test
- package: synphot
test-dependencies: test
- package: wfpc2tools
exclude:
- runs-on: macos-13
python-version: '3.10'
- runs-on: macos-13
python-version: '3.11'
- runs-on: macos-latest
python-version: '3.10'
- runs-on: macos-latest
python-version: '3.11'
runs-on: ${{ matrix.runs-on }}
name: "`pytest --pyargs ${{ matrix.package }} ${{ matrix.pytest-args }} -n auto --dist=loadscope` (${{ matrix.runs-on }}, py${{ matrix.python-version }})"
steps:
- if: matrix.crds-observatory != ''
run: echo CRDS_OBSERVATORY=${{ matrix.crds-observatory }} >> $GITHUB_ENV
- if: matrix.crds-observatory != ''
run: echo CRDS_SERVER_URL=https://${{ matrix.crds-observatory }}-crds.stsci.edu >> $GITHUB_ENV
- if: matrix.crds-observatory != ''
run: echo CRDS_CONTEXT=${{ matrix.crds-observatory == 'hst' && needs.crds-contexts.outputs.hst || (matrix.crds-observatory == 'jwst' && needs.crds-contexts.outputs.jwst || (matrix.crds-observatory == 'roman' && needs.crds-contexts.outputs.roman || '')) }} >> $GITHUB_ENV
- if: env.CRDS_CONTEXT != ''
uses: actions/cache@6849a6489940f00c2f30c0fb92c6274307ccb58a # v4.1.2
with:
path: ${{ env.CRDS_PATH }}
key: crds-${{ matrix.package }}-${{ env.CRDS_CONTEXT }}
- uses: actions/checkout@11bd71901bbe5b1630ceea73d27597364c9af683 # v4.2.2
- uses: mamba-org/setup-micromamba@ab6bf8bf7403e8023a094abeec19d6753bdc143e # v2.0.1
with:
environment-name: stenv-${{ runner.os }}-py${{ matrix.python-version }}
environment-file: environment.yaml
create-args: >-
python=${{ matrix.python-version }}
cache-downloads: true
cache-downloads-key: downloads-${{ needs.build.outputs.date }}
cache-environment: true
cache-environment-key: environment-${{ needs.build.outputs.date }}
init-shell: bash
generate-run-shell: false
- run: pip install pytest pytest-xdist ${{ matrix.test-dependencies }}
- if: matrix.test-extras != ''
run: pip install ${{ matrix.package }}[${{ matrix.test-extras }}]
- run: micromamba update -f environment.yaml
- run: pip list
- run: pytest --pyargs ${{ matrix.package }} ${{ matrix.pytest-args }} -n auto --dist=loadscope
test_from_source:
needs: [ build, crds-contexts ]
strategy:
matrix:
package: [ calcos, drizzlepac, hstcal, stistools, stsynphot ]
# the macOS 13 runner is on Intel hardware
runs-on: [ ubuntu-latest, macos-13, macos-latest ]
python-version: [ '3.10', '3.11', '3.12' ]
include:
- package: calcos
repository: spacetelescope/calcos
test-extras: test
pytest-args: --slow
- package: drizzlepac
repository: spacetelescope/drizzlepac
test-extras: test
- package: hstcal
repository: spacetelescope/hstcal
test-dependencies: >-
crds
ci_watson
pytest-args: --slow
test-directory: tests
crds-observatory: hst
- package: stistools
repository: spacetelescope/stistools
- package: stsynphot
repository: spacetelescope/stsynphot_refactor
test-extras: test
exclude:
- runs-on: macos-13
python-version: '3.10'
- runs-on: macos-13
python-version: '3.11'
- runs-on: macos-latest
python-version: '3.10'
- runs-on: macos-latest
python-version: '3.11'
fail-fast: false
runs-on: ${{ matrix.runs-on }}
name: "`pytest ${{ matrix.package }}/${{ matrix.test-directory }} ${{ matrix.pytest-args }} -n auto --dist=loadscope` (${{ matrix.runs-on }}, py${{ matrix.python-version }})"
steps:
- if: matrix.crds-observatory != ''
run: echo CRDS_OBSERVATORY=${{ matrix.crds-observatory }} >> $GITHUB_ENV
- if: matrix.crds-observatory != ''
run: echo CRDS_SERVER_URL=${{ matrix.crds-observatory }}-crds.stsci.edu >> $GITHUB_ENV
- if: matrix.crds-observatory != ''
run: echo CRDS_CONTEXT=${{ matrix.crds-observatory == 'hst' && needs.crds-contexts.outputs.hst || matrix.crds-observatory == 'jwst' && needs.crds-contexts.outputs.jwst || matrix.crds-observatory == 'roman' && needs.crds-contexts.outputs.roman || '' }} >> $GITHUB_ENV
- if: env.CRDS_CONTEXT != ''
uses: actions/cache@6849a6489940f00c2f30c0fb92c6274307ccb58a # v4.1.2
with:
path: ${{ env.CRDS_PATH }}
key: crds-${{ matrix.package }}-${{ env.CRDS_CONTEXT }}
- uses: actions/checkout@11bd71901bbe5b1630ceea73d27597364c9af683 # v4.2.2
with:
path: stenv
- uses: mamba-org/setup-micromamba@ab6bf8bf7403e8023a094abeec19d6753bdc143e # v2.0.1
with:
environment-name: stenv-${{ runner.os }}-py${{ matrix.python-version }}
environment-file: stenv/environment.yaml
create-args: >-
python=${{ matrix.python-version }}
cache-downloads: true
cache-downloads-key: downloads-${{ needs.build.outputs.date }}
cache-environment: true
cache-environment-key: environment-${{ needs.build.outputs.date }}
init-shell: bash
generate-run-shell: false
- run: echo "version=$(pip list | awk '$1 == "${{ matrix.package }}" {print $2}')" >> $GITHUB_OUTPUT
id: package_version
# TODO: figure out a better way to use package version when checking out a Git ref
- uses: actions/checkout@11bd71901bbe5b1630ceea73d27597364c9af683 # v4.2.2
with:
path: ${{ matrix.package }}
repository: ${{ matrix.repository }}
ref: ${{ steps.package_version.outputs.version }}
fetch-depth: 0
- run: pip install pytest pytest-xdist ${{ matrix.test-dependencies }}
- if: matrix.test-extras != ''
run: pip install .[${{ matrix.test-extras }}]
working-directory: ${{ matrix.package }}
- if: matrix.package != 'hstcal'
run: pip install -e .
working-directory: ${{ matrix.package }}
- run: micromamba update -f stenv/environment.yaml
- run: pip list
- run: pytest ${{ matrix.test-directory }} ${{ matrix.pytest-args }} -n auto --dist=loadscope
working-directory: ${{ matrix.package }}
crds_test_cache:
uses: spacetelescope/crds/.github/workflows/cache.yml@4c82b705635e6bab73a577bfe89e6fc71f40b62d # 12.0.5
test_crds_with_data:
needs: [ build, crds_test_cache ]
strategy:
fail-fast: false
matrix:
package: [ crds ]
# the macOS 13 runner is on Intel hardware
runs-on: [ ubuntu-latest, macos-13, macos-latest ]
python-version: [ '3.10', '3.11', '3.12' ]
include:
- package: crds
repository: spacetelescope/crds
exclude:
- runs-on: macos-13
python-version: '3.10'
- runs-on: macos-13
python-version: '3.11'
- runs-on: macos-latest
python-version: '3.10'
- runs-on: macos-latest
python-version: '3.11'
runs-on: ${{ matrix.runs-on }}
name: "`crds` `./runtests --cover` (${{ matrix.runs-on }}, py${{ matrix.python-version }})"
env:
CRDS_PATH: /tmp/crds-cache-default-test
CRDS_TEST_ROOT: /tmp
CRDS_TESTING_CACHE: /tmp/crds-cache-test
CRDS_SERVER_URL: https://hst-crds.stsci.edu
steps:
- uses: actions/checkout@11bd71901bbe5b1630ceea73d27597364c9af683 # v4.2.2
with:
path: stenv
- uses: mamba-org/setup-micromamba@ab6bf8bf7403e8023a094abeec19d6753bdc143e # v2.0.1
with:
environment-name: stenv-${{ runner.os }}-py${{ matrix.python-version }}
environment-file: stenv/environment.yaml
create-args: >-
python=${{ matrix.python-version }}
cache-downloads: true
cache-downloads-key: downloads-${{ needs.build.outputs.date }}
cache-environment: true
cache-environment-key: environment-${{ needs.build.outputs.date }}
init-shell: bash
generate-run-shell: false
- run: micromamba install -y filelock requests
- run: pip install parsely roman-datamodels git+https://github.com/spacetelescope/jwst
- run: pip list
- run: echo "version=$(pip list | awk '$1 == "${{ matrix.package }}" {print $2}')" >> $GITHUB_OUTPUT
id: package_version
# TODO: figure out a better way to use package version when checking out a Git ref
- uses: actions/checkout@11bd71901bbe5b1630ceea73d27597364c9af683 # v4.2.2
with:
path: ${{ matrix.package }}
repository: ${{ matrix.repository }}
ref: ${{ steps.package_version.outputs.version }}
fetch-depth: 0
- run: pip uninstall --yes crds && ./install && pip install .[submission,test,docs,synphot]
working-directory: ${{ matrix.package }}
- uses: actions/cache@6849a6489940f00c2f30c0fb92c6274307ccb58a # v4.1.2
with:
path: |
${{ needs.crds_test_cache.outputs.path }}
${{ needs.crds_test_cache.outputs.testing_cache }}
key: ${{ needs.crds_test_cache.outputs.key }}
- run: ./runtests --cover
working-directory: ${{ matrix.package }}
test_for_smoke:
needs: [ build ]
strategy:
matrix:
package: [ calcos, drizzlepac ]
# the macOS 13 runner is on Intel hardware
runs-on: [ ubuntu-latest, macos-13, macos-latest ]
python-version: [ '3.10', '3.11', '3.12' ]
include:
- package: calcos
run: calcos la8n01qkq_rawtag_a.fits
crds-observatory: hst
jref: hst/references/hst
- package: drizzlepac
run: pytest tests/test_drizzlepac.py -n auto --dist=loadscope
crds-observatory: hst
jref: hst/references/hst
exclude:
- runs-on: macos-13
python-version: '3.10'
- runs-on: macos-13
python-version: '3.11'
- runs-on: macos-latest
python-version: '3.10'
- runs-on: macos-latest
python-version: '3.11'
fail-fast: false
runs-on: ${{ matrix.runs-on }}
name: "`${{ matrix.run }}` (${{ matrix.runs-on }}, py${{ matrix.python-version }})"
env:
jref: /tmp/crds_cache/${{ matrix.jref }}
steps:
- if: matrix.crds-observatory != ''
run: echo CRDS_OBSERVATORY=${{ matrix.crds-observatory }} >> $GITHUB_ENV
- if: matrix.crds-observatory != ''
run: echo CRDS_SERVER_URL=${{ matrix.crds-observatory }}-crds.stsci.edu >> $GITHUB_ENV
- if: matrix.crds-observatory != ''
run: echo CRDS_CONTEXT=${{ matrix.crds-observatory == 'hst' && needs.crds-contexts.outputs.hst || (matrix.crds-observatory == 'jwst' && needs.crds-contexts.outputs.jwst || (matrix.crds-observatory == 'roman' && needs.crds-contexts.outputs.roman || '')) }} >> $GITHUB_ENV
- if: env.CRDS_CONTEXT != ''
uses: actions/cache@6849a6489940f00c2f30c0fb92c6274307ccb58a # v4.1.2
with:
path: ${{ env.CRDS_PATH }}
key: crds-${{ matrix.package }}-${{ env.CRDS_CONTEXT }}
- uses: actions/checkout@11bd71901bbe5b1630ceea73d27597364c9af683 # v4.2.2
with:
lfs: true
- uses: mamba-org/setup-micromamba@ab6bf8bf7403e8023a094abeec19d6753bdc143e # v2.0.1
with:
environment-name: stenv-${{ runner.os }}-py${{ matrix.python-version }}
environment-file: environment.yaml
create-args: >-
python=${{ matrix.python-version }}
cache-downloads: true
cache-downloads-key: downloads-${{ needs.build.outputs.date }}
cache-environment: true
cache-environment-key: environment-${{ needs.build.outputs.date }}
init-shell: bash
generate-run-shell: false
- run: pip install pytest pytest-xdist
- run: pip list
- uses: actions/cache@6849a6489940f00c2f30c0fb92c6274307ccb58a # v4.1.2
with:
path: tests/data/
key: data-${{ hashFiles('tests/data/*') }}
- run: ${{ matrix.run }}