MPM_GBS_samples.tab

#Sample	First_failing_reason	Stop_run_avoid	Second_failing_reason	Warnings	Notes	Sequencing_Model	Assembly	Original_read_size	Read_size_Trimmomatic
SRR1790752			Assembly_Mapping_Coverage			HiSeq 2500	yes	101	85
ERR840705	FastQC_sequence_GC_content	fastQCproceed		High_assembled_nucleotides		HiSeq 2500	yes_conditionally	151	148
ERR048560			MLST scheme found (efaecalis)	Assembly_Mapping_Mapping	ReadsMapped_89_AssemblyCoverage_139_TrueCoverage_37	HiSeq 2000	yes	75	71
ERR126845	TrueCoverage_absentGenes					HiSeq 2000	no	-	-
SRR3320580						HiSeq 2500	yes	151	149
SRR4414149						MiSeq	yes	150	134
SRR494564	Low_estimatedCoverage					Genome Analyzer II	no	-	-
SRR497008	TrueCoverage_coverage					Genome Analyzer II	no	-	-
SRR5575009					UMMI	MiSeq	yes	250	233
SRR5575010					UMMI	MiSeq	yes	250	233