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Cannot install with python 3.11 #148

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geospatial-jeff opened this issue Nov 25, 2022 · 2 comments
Closed

Cannot install with python 3.11 #148

geospatial-jeff opened this issue Nov 25, 2022 · 2 comments

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@geospatial-jeff
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geospatial-jeff commented Nov 25, 2022 •
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Currently pypgstac cannot be installed with python 3.11. Discovered while adding support for 3.11 to stac-fastapi in stac-utils/stac-fastapi#500.

Steps to reproduce (using conda):

> conda create -n py311 python=3.11
> conda activate py311

# This is the install used by stac-fastapi
> pip install "pypgstac[psycopg]==0.6.*"


Collecting pypgstac[psycopg]==0.6.*
  Using cached pypgstac-0.6.10-py3-none-any.whl (625 kB)
Collecting smart-open==4.2.*
  Using cached smart_open-4.2.0.tar.gz (119 kB)
  Preparing metadata (setup.py) ... done
Collecting orjson>=3.5.2
  Using cached orjson-3.8.2-cp311-cp311-macosx_10_9_x86_64.macosx_11_0_arm64.macosx_10_9_universal2.whl (493 kB)
Collecting python-dateutil==2.8.*
  Using cached python_dateutil-2.8.2-py2.py3-none-any.whl (247 kB)
Collecting fire==0.4.*
  Using cached fire-0.4.0.tar.gz (87 kB)
  Preparing metadata (setup.py) ... done
Collecting plpygis==0.2.*
  Using cached plpygis-0.2.0.tar.gz (45 kB)
  Preparing metadata (setup.py) ... done
Collecting pydantic[dotenv]==1.9.*
  Using cached pydantic-1.9.2-py3-none-any.whl (143 kB)
Collecting tenacity==8.0.*
  Using cached tenacity-8.0.1-py3-none-any.whl (24 kB)
Collecting psycopg[binary]==3.0.*
  Using cached psycopg-3.0.18-py3-none-any.whl (143 kB)
Collecting psycopg-pool==3.1.*
  Using cached psycopg_pool-3.1.4-py3-none-any.whl (28 kB)
Collecting six
  Using cached six-1.16.0-py2.py3-none-any.whl (11 kB)
Collecting termcolor
  Using cached termcolor-2.1.1-py3-none-any.whl (6.2 kB)
Collecting psycopg[binary]==3.0.*
  Using cached psycopg-3.0.17-py3-none-any.whl (143 kB)
  Using cached psycopg-3.0.16-py3-none-any.whl (143 kB)
  Using cached psycopg-3.0.15-py3-none-any.whl (144 kB)
  Using cached psycopg-3.0.14-py3-none-any.whl (143 kB)
  Using cached psycopg-3.0.13-py3-none-any.whl (142 kB)
  Using cached psycopg-3.0.12-py3-none-any.whl (143 kB)
  Using cached psycopg-3.0.11-py3-none-any.whl (143 kB)
  Using cached psycopg-3.0.10-py3-none-any.whl (142 kB)
  Using cached psycopg-3.0.9-py3-none-any.whl (141 kB)
  Using cached psycopg-3.0.8-py3-none-any.whl (142 kB)
  Using cached psycopg-3.0.7-py3-none-any.whl (141 kB)
  Using cached psycopg-3.0.6-py3-none-any.whl (141 kB)
  Using cached psycopg-3.0.5-py3-none-any.whl (141 kB)
  Using cached psycopg-3.0.4-py3-none-any.whl (140 kB)
  Using cached psycopg-3.0.3-py3-none-any.whl (140 kB)
  Using cached psycopg-3.0.2-py3-none-any.whl (140 kB)
  Using cached psycopg-3.0.1-py3-none-any.whl (140 kB)
  Using cached psycopg-3.0-py3-none-any.whl (140 kB)
INFO: pip is looking at multiple versions of <Python from Requires-Python> to determine which version is compatible with other requirements. This could take a while.
INFO: pip is looking at multiple versions of psycopg-pool to determine which version is compatible with other requirements. This could take a while.
Collecting psycopg-pool==3.1.*
  Using cached psycopg_pool-3.1.3-py3-none-any.whl (28 kB)
INFO: pip is looking at multiple versions of plpygis to determine which version is compatible with other requirements. This could take a while.
INFO: pip is looking at multiple versions of fire to determine which version is compatible with other requirements. This could take a while.
INFO: pip is looking at multiple versions of pypgstac[psycopg] to determine which version is compatible with other requirements. This could take a while.
Collecting pypgstac[psycopg]==0.6.*
  Using cached pypgstac-0.6.9-py3-none-any.whl (603 kB)
  Using cached pypgstac-0.6.8-py3-none-any.whl (580 kB)
  Using cached pypgstac-0.6.7-py3-none-any.whl (557 kB)
  Using cached pypgstac-0.6.6-py3-none-any.whl (535 kB)
  Using cached pypgstac-0.6.5-py3-none-any.whl (513 kB)
  Using cached pypgstac-0.6.4-py3-none-any.whl (491 kB)
  Using cached pypgstac-0.6.3-py3-none-any.whl (470 kB)
INFO: pip is looking at multiple versions of pypgstac[psycopg] to determine which version is compatible with other requirements. This could take a while.
  Using cached pypgstac-0.6.2-py3-none-any.whl (449 kB)
  Using cached pypgstac-0.6.1-py3-none-any.whl (430 kB)
  Using cached pypgstac-0.6.0-py3-none-any.whl (410 kB)
ERROR: Cannot install psycopg[binary]==3.0, psycopg[binary]==3.0.1, psycopg[binary]==3.0.10, psycopg[binary]==3.0.11, psycopg[binary]==3.0.12, psycopg[binary]==3.0.13, psycopg[binary]==3.0.14, psycopg[binary]==3.0.15, psycopg[binary]==3.0.16, psycopg[binary]==3.0.17, psycopg[binary]==3.0.18, psycopg[binary]==3.0.2, psycopg[binary]==3.0.3, psycopg[binary]==3.0.4, psycopg[binary]==3.0.5, psycopg[binary]==3.0.6, psycopg[binary]==3.0.7, psycopg[binary]==3.0.8 and psycopg[binary]==3.0.9 because these package versions have conflicting dependencies.

The conflict is caused by:
    psycopg[binary] 3.0.18 depends on psycopg-binary==3.0.18; extra == "binary"
    psycopg[binary] 3.0.17 depends on psycopg-binary==3.0.17; extra == "binary"
    psycopg[binary] 3.0.16 depends on psycopg-binary==3.0.16; extra == "binary"
    psycopg[binary] 3.0.15 depends on psycopg-binary==3.0.15; extra == "binary"
    psycopg[binary] 3.0.14 depends on psycopg-binary==3.0.14; extra == "binary"
    psycopg[binary] 3.0.13 depends on psycopg-binary==3.0.13; extra == "binary"
    psycopg[binary] 3.0.12 depends on psycopg-binary==3.0.12; extra == "binary"
    psycopg[binary] 3.0.11 depends on psycopg-binary==3.0.11; extra == "binary"
    psycopg[binary] 3.0.10 depends on psycopg-binary==3.0.10; extra == "binary"
    psycopg[binary] 3.0.9 depends on psycopg-binary==3.0.9; extra == "binary"
    psycopg[binary] 3.0.8 depends on psycopg-binary==3.0.8; extra == "binary"
    psycopg[binary] 3.0.7 depends on psycopg-binary==3.0.7; extra == "binary"
    psycopg[binary] 3.0.6 depends on psycopg-binary==3.0.6; extra == "binary"
    psycopg[binary] 3.0.5 depends on psycopg-binary==3.0.5; extra == "binary"
    psycopg[binary] 3.0.4 depends on psycopg-binary==3.0.4; extra == "binary"
    psycopg[binary] 3.0.3 depends on psycopg-binary==3.0.3; extra == "binary"
    psycopg[binary] 3.0.2 depends on psycopg-binary==3.0.2; extra == "binary"
    psycopg[binary] 3.0.1 depends on psycopg-binary==3.0.1; extra == "binary"
    psycopg[binary] 3.0 depends on psycopg-binary==3.0; extra == "binary"

To fix this you could try to:
1. loosen the range of package versions you've specified
2. remove package versions to allow pip attempt to solve the dependency conflict

ERROR: ResolutionImpossible: for help visit https://pip.pypa.io/en/latest/topics/dependency-resolution/#dealing-with-dependency-conflicts

Trying a pinned version:

> pip install "pypgstac[psycopg]==0.6.10"

Collecting pypgstac[psycopg]==0.6.10
  Using cached pypgstac-0.6.10-py3-none-any.whl (625 kB)
Collecting smart-open==4.2.*
  Using cached smart_open-4.2.0.tar.gz (119 kB)
  Preparing metadata (setup.py) ... done
Collecting orjson>=3.5.2
  Using cached orjson-3.8.2-cp311-cp311-macosx_10_9_x86_64.macosx_11_0_arm64.macosx_10_9_universal2.whl (493 kB)
Collecting python-dateutil==2.8.*
  Using cached python_dateutil-2.8.2-py2.py3-none-any.whl (247 kB)
Collecting fire==0.4.*
  Using cached fire-0.4.0.tar.gz (87 kB)
  Preparing metadata (setup.py) ... done
Collecting plpygis==0.2.*
  Using cached plpygis-0.2.0.tar.gz (45 kB)
  Preparing metadata (setup.py) ... done
Collecting pydantic[dotenv]==1.9.*
  Using cached pydantic-1.9.2-py3-none-any.whl (143 kB)
Collecting tenacity==8.0.*
  Using cached tenacity-8.0.1-py3-none-any.whl (24 kB)
Collecting psycopg[binary]==3.0.*
  Using cached psycopg-3.0.18-py3-none-any.whl (143 kB)
Collecting psycopg-pool==3.1.*
  Using cached psycopg_pool-3.1.4-py3-none-any.whl (28 kB)
Collecting six
  Using cached six-1.16.0-py2.py3-none-any.whl (11 kB)
Collecting termcolor
  Using cached termcolor-2.1.1-py3-none-any.whl (6.2 kB)
Collecting psycopg[binary]==3.0.*
  Using cached psycopg-3.0.17-py3-none-any.whl (143 kB)
  Using cached psycopg-3.0.16-py3-none-any.whl (143 kB)
  Using cached psycopg-3.0.15-py3-none-any.whl (144 kB)
  Using cached psycopg-3.0.14-py3-none-any.whl (143 kB)
  Using cached psycopg-3.0.13-py3-none-any.whl (142 kB)
  Using cached psycopg-3.0.12-py3-none-any.whl (143 kB)
  Using cached psycopg-3.0.11-py3-none-any.whl (143 kB)
  Using cached psycopg-3.0.10-py3-none-any.whl (142 kB)
  Using cached psycopg-3.0.9-py3-none-any.whl (141 kB)
  Using cached psycopg-3.0.8-py3-none-any.whl (142 kB)
  Using cached psycopg-3.0.7-py3-none-any.whl (141 kB)
  Using cached psycopg-3.0.6-py3-none-any.whl (141 kB)
  Using cached psycopg-3.0.5-py3-none-any.whl (141 kB)
  Using cached psycopg-3.0.4-py3-none-any.whl (140 kB)
  Using cached psycopg-3.0.3-py3-none-any.whl (140 kB)
  Using cached psycopg-3.0.2-py3-none-any.whl (140 kB)
  Using cached psycopg-3.0.1-py3-none-any.whl (140 kB)
  Using cached psycopg-3.0-py3-none-any.whl (140 kB)
INFO: pip is looking at multiple versions of <Python from Requires-Python> to determine which version is compatible with other requirements. This could take a while.
INFO: pip is looking at multiple versions of psycopg-pool to determine which version is compatible with other requirements. This could take a while.
Collecting psycopg-pool==3.1.*
  Using cached psycopg_pool-3.1.3-py3-none-any.whl (28 kB)
INFO: pip is looking at multiple versions of plpygis to determine which version is compatible with other requirements. This could take a while.
INFO: pip is looking at multiple versions of fire to determine which version is compatible with other requirements. This could take a while.
INFO: pip is looking at multiple versions of pypgstac[psycopg] to determine which version is compatible with other requirements. This could take a while.
ERROR: Cannot install psycopg[binary]==3.0, psycopg[binary]==3.0.1, psycopg[binary]==3.0.10, psycopg[binary]==3.0.11, psycopg[binary]==3.0.12, psycopg[binary]==3.0.13, psycopg[binary]==3.0.14, psycopg[binary]==3.0.15, psycopg[binary]==3.0.16, psycopg[binary]==3.0.17, psycopg[binary]==3.0.18, psycopg[binary]==3.0.2, psycopg[binary]==3.0.3, psycopg[binary]==3.0.4, psycopg[binary]==3.0.5, psycopg[binary]==3.0.6, psycopg[binary]==3.0.7, psycopg[binary]==3.0.8 and psycopg[binary]==3.0.9 because these package versions have conflicting dependencies.

The conflict is caused by:
    psycopg[binary] 3.0.18 depends on psycopg-binary==3.0.18; extra == "binary"
    psycopg[binary] 3.0.17 depends on psycopg-binary==3.0.17; extra == "binary"
    psycopg[binary] 3.0.16 depends on psycopg-binary==3.0.16; extra == "binary"
    psycopg[binary] 3.0.15 depends on psycopg-binary==3.0.15; extra == "binary"
    psycopg[binary] 3.0.14 depends on psycopg-binary==3.0.14; extra == "binary"
    psycopg[binary] 3.0.13 depends on psycopg-binary==3.0.13; extra == "binary"
    psycopg[binary] 3.0.12 depends on psycopg-binary==3.0.12; extra == "binary"
    psycopg[binary] 3.0.11 depends on psycopg-binary==3.0.11; extra == "binary"
    psycopg[binary] 3.0.10 depends on psycopg-binary==3.0.10; extra == "binary"
    psycopg[binary] 3.0.9 depends on psycopg-binary==3.0.9; extra == "binary"
    psycopg[binary] 3.0.8 depends on psycopg-binary==3.0.8; extra == "binary"
    psycopg[binary] 3.0.7 depends on psycopg-binary==3.0.7; extra == "binary"
    psycopg[binary] 3.0.6 depends on psycopg-binary==3.0.6; extra == "binary"
    psycopg[binary] 3.0.5 depends on psycopg-binary==3.0.5; extra == "binary"
    psycopg[binary] 3.0.4 depends on psycopg-binary==3.0.4; extra == "binary"
    psycopg[binary] 3.0.3 depends on psycopg-binary==3.0.3; extra == "binary"
    psycopg[binary] 3.0.2 depends on psycopg-binary==3.0.2; extra == "binary"
    psycopg[binary] 3.0.1 depends on psycopg-binary==3.0.1; extra == "binary"
    psycopg[binary] 3.0 depends on psycopg-binary==3.0; extra == "binary"

To fix this you could try to:
1. loosen the range of package versions you've specified
2. remove package versions to allow pip attempt to solve the dependency conflict

ERROR: ResolutionImpossible: for help visit https://pip.pypa.io/en/latest/topics/dependency-resolution/#dealing-with-dependency-conflicts

Without the psycopg extra it works:

> pip install "pypgstac==0.6.10"

Collecting pypgstac==0.6.10
  Using cached pypgstac-0.6.10-py3-none-any.whl (625 kB)
Collecting smart-open==4.2.*
  Using cached smart_open-4.2.0.tar.gz (119 kB)
  Preparing metadata (setup.py) ... done
Collecting orjson>=3.5.2
  Using cached orjson-3.8.2-cp311-cp311-macosx_10_9_x86_64.macosx_11_0_arm64.macosx_10_9_universal2.whl (493 kB)
Collecting python-dateutil==2.8.*
  Using cached python_dateutil-2.8.2-py2.py3-none-any.whl (247 kB)
Collecting fire==0.4.*
  Using cached fire-0.4.0.tar.gz (87 kB)
  Preparing metadata (setup.py) ... done
Collecting plpygis==0.2.*
  Using cached plpygis-0.2.0.tar.gz (45 kB)
  Preparing metadata (setup.py) ... done
Collecting pydantic[dotenv]==1.9.*
  Using cached pydantic-1.9.2-py3-none-any.whl (143 kB)
Collecting tenacity==8.0.*
  Using cached tenacity-8.0.1-py3-none-any.whl (24 kB)
Collecting six
  Using cached six-1.16.0-py2.py3-none-any.whl (11 kB)
Collecting termcolor
  Using cached termcolor-2.1.1-py3-none-any.whl (6.2 kB)
Collecting typing-extensions>=3.7.4.3
  Using cached typing_extensions-4.4.0-py3-none-any.whl (26 kB)
Collecting python-dotenv>=0.10.4
  Using cached python_dotenv-0.21.0-py3-none-any.whl (18 kB)
Building wheels for collected packages: fire, plpygis, smart-open
  Building wheel for fire (setup.py) ... done
  Created wheel for fire: filename=fire-0.4.0-py2.py3-none-any.whl size=115927 sha256=8478bf7131e32e801c1dcf7e6d12e8e7b1e40a6fa535f40ee7121333aeb7e898
  Stored in directory: /Users/jeff/Library/Caches/pip/wheels/b4/40/e7/491f11d209b06d81dea7470bc464ca2eb19cc78d1076a522ca
  Building wheel for plpygis (setup.py) ... done
  Created wheel for plpygis: filename=plpygis-0.2.0-py3-none-any.whl size=68431 sha256=a651654e8621b6f9a4ec6ca5ca0aea031a8a0c9e283ebc775a5690b9b976e915
  Stored in directory: /Users/jeff/Library/Caches/pip/wheels/98/4b/c8/b4b52ee3bde60e1849cfd24016b2b38d215fb6716dcc28b3fc
  Building wheel for smart-open (setup.py) ... done
  Created wheel for smart-open: filename=smart_open-4.2.0-py3-none-any.whl size=109640 sha256=0a244d97e7f6b249c32e563935c9d0a2141d34388a81c025e23308f5ae6b072a
  Stored in directory: /Users/jeff/Library/Caches/pip/wheels/39/b3/bb/8dcf39626f5d7e7eb9092523557a910c78220407f3494a6bb3
Successfully built fire plpygis smart-open
Installing collected packages: plpygis, typing-extensions, termcolor, tenacity, smart-open, six, python-dotenv, orjson, python-dateutil, pydantic, fire, pypgstac
Successfully installed fire-0.4.0 orjson-3.8.2 plpygis-0.2.0 pydantic-1.9.2 pypgstac-0.6.10 python-dateutil-2.8.2 python-dotenv-0.21.0 six-1.16.0 smart-open-4.2.0 tenacity-8.0.1 termcolor-2.1.1 typing-extensions-4.4.0

Note it appears that psycopg2==2.9.5 added support for 3.11 (https://www.psycopg.org/docs/news.html#what-s-new-in-psycopg-2-9-5), but maybe psycopg doesn't support this yet?
@vincentsarago
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https://github.com/stac-utils/pgstac/blob/main/pypgstac/setup.py#L28

This is because of ☝️, we need to update this to "psycopg[binary]==3.1.*",

@vincentsarago
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should be fixed by #142

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@vincentsarago @geospatial-jeff