DESCRIPTION

Package: zingeR
Type: Package
Title: Zero-Inflated Negative binomial Gene Expression in R
Version: 0.1.0
Author: Koen Van den Berge
Maintainer: Koen Van den Berge <koen.vandenberge@ugent.be>
Description: The zingeR package unlocks RNA-seq tools for zero-inflation applications by estimating posterior probabilities that a zero belongs to the count component. These observation-level probabilities can be used as weights in RNA-seq pipelines.
License: What license is it under?
LazyData: TRUE
Suggests:
    knitr,
    rmarkdown
VignetteBuilder: knitr
RoxygenNote: 5.0.1
Imports: DESeq2 (>= 1.15.39), edgeR (>= 3.19),gamlss,
    gamlss.tr,
    limma,
    mgcv,
    MASS,
    graphics, 
    stats, 
    utils, 
    methods, 
    locfit,
    BiocGenerics (>= 0.7.5),
    Biobase,
    BiocParallel,
    genefilter,
    methods,
    geneplotter,
    ggplot2,
    Hmisc,
    Rcpp (>= 0.11.0),
    Formula,
    gamlss.data,
    gamlss.dist
Depends:DESeq2 (>= 1.15.39), edgeR (>= 3.19)
biocViews: transcriptomics, single cell RNA-sequencing, zero-inflation, differential expression