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<!DOCTYPE html>
<html lang="en">
<head>
<!-- bar graph style -->
<style>
.bar { fill: steelblue; }
.bar:hover { fill: brown; }
.axis { font: 10px sans-serif; }
.axis path, .axis line { fill: none; stroke: #000; shape-rendering: crispEdges; }
.x.axis path { display: none; }
</style>
<link href="css/bootstrap.css" rel="stylesheet">
<link href="css/dashboard.css" rel="stylesheet">
<script src="js/jquery.min.js"></script>
<script src="js/bootstrap.js"></script>
<script src="js/gunzip.min.js"></script>
<script src="js/sql.js"></script>
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<script src="js/palette.js"></script>
<script src='js/untap.js'></script>
<script src='js/untap-bargraph.js'></script>
<script src='js/untap-bargraph-grouped.js'></script>
<script src='js/untap-matrix.js'></script>
<script src='js/untap-custom.js'></script>
<script src='js/distance.js'></script>
<script src='js/kmeans.js'></script>
<script src='js/hcluster.js'></script>
<style>
/* disable text selection */
svg *::selection {
background : transparent;
}
svg *::-moz-selection {
background:transparent;
}
svg *::-webkit-selection {
background:transparent;
}
rect.selection {
stroke : #333;
stroke-dasharray: 4px;
stroke-opacity : 0.5;
fill : transparent;
}
rect.cell-border {
stroke: #eee;
stroke-width:0.3px;
}
rect.cell-selected {
stroke: rgb(51,102,153);
stroke-width:0.5px;
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rect.cell-hover {
stroke: #F00;
stroke-width:0.3px;
}
text.mono {
font-size: 9pt;
font-family: Consolas, courier;
fill: #aaa;
}
text.text-selected {
fill: #000;
}
text.text-highlight {
fill: #c00;
}
text.text-hover {
fill: #00C;
}
#tooltip {
position: absolute;
width: 200px;
height: auto;
padding: 10px;
background-color: white;
-webkit-border-radius: 10px;
-moz-border-radius: 10px;
border-radius: 10px;
-webkit-box-shadow: 4px 4px 10px rgba(0, 0, 0, 0.4);
-moz-box-shadow: 4px 4px 10px rgba(0, 0, 0, 0.4);
box-shadow: 4px 4px 10px rgba(0, 0, 0, 0.4);
pointer-events: none;
}
#tooltip.hidden {
display: none;
}
#tooltip p {
margin: 0;
font-family: sans-serif;
font-size: 12px;
line-height: 20px;
}
</style>
<div id="tooltip" class="hidden" style='z-index:100;'> <p><span id="value"></span></p> </div>
</head>
<body>
<!-- Modal -->
<div class="modal fade" id="schemaModal" tabindex="-1" role="dialog" aria-labelledby="schemaModalLabel">
<div class="modal-dialog" role="document">
<div class="modal-content">
<div class="modal-header">
<button type="button" class="close" data-dismiss="modal" aria-label="Close"><span aria-hidden="true">×</span></button>
<h4 class="modal-title" id="schemaModalLabel">Database Schema Quick Reference</h4>
</div>
<div class="modal-body">
<div class='row'>
<div class='col-sm-6'> <b>survey</b> </div>
<div class='col-sm-6'> <b>uploaded_data</b> </div>
</div>
<div class='row'>
<div class='col-sm-6'>
<code>id</code> <code>human_id</code> <code>date</code> <code>phenotype_category</code> <code>phenotype</code>
</div>
<div class='col-sm-6'>
<code>id</code>
<code>human_id</code>
<code>date</code>
<code>data_type</code>
<code>source</code>
<code>name</code>
<code>download_description</code>
<code>download_url</code>
<code>report_description</code>
<code>report_url</code>
</div>
</div>
<hr />
<div class='row'>
<div class='col-sm-6'> <b>allergies</b> </div>
<div class='col-sm-6'> <b>conditions</b> </div>
</div>
<div class='row'>
<div class="col-sm-6">
<code>id</code> <code>human_id</code> <code>name</code> <code>severity</code> <code>start_date</code> <code>end_date</code>
</div>
<div class="col-sm-6">
<code>id</code> <code>human_id</code> <code>name</code> <code>start_date</code> <code>end_date</code>
</div>
</div>
<br/>
<div class='row'>
<div class='col-sm-6'> <b>demographics</b> </div>
<div class='col-sm-6'> <b>enrollment_date</b> </div>
</div>
<div class='row'>
<div class="col-sm-6">
<code>id</code>
<code>human_id</code>
<code>date_of_birth</code>
<code>gender</code>
<code>weight</code>
<code>height</code>
<code>blood_type</code>
<code>race</code> </div>
<div class="col-sm-6">
<code>id</code> <code>human_id</code> <code>enrollment_date</code> </div>
</div>
<br/>
<div class='row'>
<div class='col-sm-6'> <b>immunizations</b> </div>
<div class='col-sm-6'> <b>medications</b> </div>
</div>
<div class='row'>
<div class="col-sm-6">
<code>id</code> <code>human_id</code> <code>name</code> <code>date</code> </div>
<div class="col-sm-6">
<code>id</code> <code>human_id</code> <code>name</code> <code>dosage</code> <code>frequency</code> <code>start_date</code> <code>end_date</code> </div>
</div>
<br/>
<div class='row'>
<div class='col-sm-6'> <b>procedures</b> </div>
<div class='col-sm-6'> <b>test_results</b> </div>
</div>
<div class='row'>
<div class="col-sm-6">
<code>id</code> <code>human_id</code> <code>name</code> <code>date</code> </div>
<div class="col-sm-6">
<code>id</code> <code>human_id</code> <code>name</code> <code>result</code> <code>date</code>
</div>
</div>
<hr />
<div class='row'>
<div class='col-sm-6'> <b>suff_record</b> </div>
<div class='col-sm-6'> <b>human_suff_record_map</b> </div>
</div>
<div class='row'>
<div class="col-sm-6"> <code>id</code> <code>json_record</code> </div>
<div class="col-sm-6"> <code>id</code> <code>uploaded_data_id</code> <code>suff_record_index</code> </div>
</div>
<br/>
<div class='row'>
<div class='col-sm-6'> <b>insuff_record</b> </div>
<div class='col-sm-6'> <b>human_insuff_record_map</b> </div>
</div>
<div class='row'>
<div class="col-sm-6"> <code>id</code> <code>json_record</code> </div>
<div class="col-sm-6"> <code>id</code> <code>uploaded_data_id</code> <code>insuff_record_index</code> </div>
</div>
<hr />
<div class='row'>
<div class='col-sm-6'> <b>specimens</b> </div>
<div class='col-sm-6'> <b>geographic_information</b> </div>
</div>
<div class='row'>
<div class="col-sm-6">
<code>id</code> <code>human_id</code> <code>href</code>
<code>text</code> <code>description</code>
<code>log_date</code> <code>log_text</code>
<code>log_description</code>
</div>
<div class="col-sm-6">
<code>id</code> <code>human_id</code>
<code>state</code> <code>zip</code>
</div>
</div>
</div>
<div class="modal-footer">
<button type="button" class="btn btn-default" data-dismiss="modal">Close</button>
</div>
</div>
</div>
</div>
<nav class="navbar navbar-inverse navbar-fixed-top">
<div class="container-fluid">
<div class="navbar-header">
<button type="button" class="navbar-toggle collapsed" data-toggle="collapse" data-target="#navbar" aria-expanded="false" aria-controls="navbar">
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<span class="icon-bar"></span>
<span class="icon-bar"></span>
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</button>
<a class="navbar-brand" href="#">Harvard Personal Genome Project Consolidated Database</a>
</div>
<div id="navbar" class="navbar-collapse collapse">
<ul class="nav navbar-nav navbar-right">
<li>
<a href='#'>
<button type="button" class="btn btn-sm" data-toggle="modal" data-target="#schemaModal"> Schema Quick Reference </button>
</a>
</li>
</ul>
</div>
</div>
</nav>
<div class="container-fluid">
<div class="row">
<div class="col-sm-3 col-md-2 sidebar">
<ul class="nav nav-sidebar" id='tabs' data-tabs='tabs'>
<li class="active"><a href="#tab-description" data-toggle="tab">Overview<span class="sr-only">(current)</span></a></li>
<li><a href="#tab-bargraph" data-toggle="tab">Summary</a></li>
<li><a href="#tab-variant-matrix" data-toggle="tab">Variants</a></li>
<li><a href="#tab-custom-query" data-toggle="tab">Custom</a></li>
<li><br/><br/><br/></li>
<li><br/><br/><br/></li>
<li><a href="#tab-schema" data-toggle="tab">Schema</a></li>
<li><a href="#tab-examples" data-toggle="tab">Examples</a></li>
</ul>
</div>
<div class="col-sm-9 col-sm-offset-3 col-md-10 col-md-offset-2 main">
<div class='tab-content'>
<div class='tab-pane active' id='tab-description'>
<h1>Consolidated Database for the Harvard PGP</h1>
<p>
In order to facilitate ease of access, some of the information available through <a href="https://my.pgp-hms.org">Harvard Personal Genome Project</a>
page and the <a href="https://evidence.pgp-hms.org">GET-Evidence</a> site has been consolidated into a small SQLite database (~120Mb uncompressed).
This is a web page front end that gives some canned visualizations of the data and allows you to create your own.
This website, along with the data files it uses, resides in an Arvados collection. Feel free to <a href='../'>browse the contents</a>.
</p>
<p>
The Harvard PGP SQLite database is available here:
</p>
<p>
<div style='text-align:center;'>
<a href='../hu-pgp.sqlite3.gz' class='btn btn-info btn-lg'>
<span class='glyphicon glyphicon-cloud-download' aria-hidden='true'></span> hu-pgp.sqlite3.gz
</a>
</div>
</p>
<p>
For convenience, the individual tables are also available as tab-separated text files that can be downloaded individually:
<ul>
<li><a href="../allergies.tsv">allergies.tsv</a></li>
<li><a href="../conditions.tsv">conditions.tsv</a></li>
<li><a href="../demographics.tsv">demographics.tsv</a></li>
<li><a href="../enrollment_date.tsv">enrollment_date.tsv</a></li>
<li><a href="../ge-insuff-hu-map.tsv">ge-insuff-hu-map.tsv</a></li>
<li><a href="../ge-insuff.tsv">ge-insuff.tsv</a></li>
<li><a href="../ge-suff-hu-map.tsv">ge-suff-hu-map.tsv</a></li>
<li><a href="../ge-suff.tsv">ge-suff.tsv</a></li>
<li><a href="../human-report-map.tsv">human-report-map.tsv</a></li>
<li><a href="../immunizations.tsv">immunizations.tsv</a></li>
<li><a href="../medications.tsv">medications.tsv</a></li>
<li><a href="../procedures.tsv">procedures.tsv</a></li>
<li><a href="../specimens.tsv">specimens.tsv</a></li>
<li><a href="../geographic_information.tsv">geographic_information.tsv</a></li>
<li><a href="../survey.tsv">survey.tsv</a></li>
<li><a href="../test_results.tsv">test_results.tsv</a></li>
<li><a href="../uploaded_data.tsv">uploaded_data.tsv</a></li>
</ul>
</p>
<p>
There are participant surveys available through <a href='https://my.pgp-hms.org/google_surveys'>Personal Genome Project website</a> but they've been collected here for convenience as well:
<ul>
<li><a href="../2011_PGP10_CAGI_Survey.csv">2011_PGP10_CAGI_Survey.csv</a></li>
<li><a href="../PGP_Participant_Survey.csv">PGP_Participant_Survey.csv</a></li>
<li><a href="../PGP_Trait_Disease_Survey_2012_Blood.csv">PGP_Trait_Disease_Survey_2012_Blood.csv</a></li>
<li><a href="../PGP_Trait_Disease_Survey_2012_Cancers.csv">PGP_Trait_Disease_Survey_2012_Cancers.csv</a></li>
<li><a href="../PGP_Trait_Disease_Survey_2012_Circulatory_System.csv">PGP_Trait_Disease_Survey_2012_Circulatory_System.csv</a></li>
<li><a href="../PGP_Trait_Disease_Survey_2012_Congenital_Traits_and_Anomalies.csv">PGP_Trait_Disease_Survey_2012_Congenital_Traits_and_Anomalies.csv</a></li>
<li><a href="../PGP_Trait_Disease_Survey_2012_Digestive_System.csv">PGP_Trait_Disease_Survey_2012_Digestive_System.csv</a></li>
<li><a href="../PGP_Trait_Disease_Survey_2012_Endocrine_Metabolic_Nutritional_and_Immunity.csv">PGP_Trait_Disease_Survey_2012_Endocrine_Metabolic_Nutritional_and_Immunity.csv</a></li>
<li><a href="../PGP_Trait_Disease_Survey_2012_Genitourinary_Systems.csv">PGP_Trait_Disease_Survey_2012_Genitourinary_Systems.csv</a></li>
<li><a href="../PGP_Trait_Disease_Survey_2012_Musculoskeletal_System_and_Connective_Tissue.csv">PGP_Trait_Disease_Survey_2012_Musculoskeletal_System_and_Connective_Tissue.csv</a></li>
<li><a href="../PGP_Trait_Disease_Survey_2012_Nervous_System.csv">PGP_Trait_Disease_Survey_2012_Nervous_System.csv</a></li>
<li><a href="../PGP_Trait_Disease_Survey_2012_Respiratory_System.csv">PGP_Trait_Disease_Survey_2012_Respiratory_System.csv</a></li>
<li><a href="../PGP_Trait_Disease_Survey_2012_Skin_and_Subcutaneous_Tissue.csv">PGP_Trait_Disease_Survey_2012_Skin_and_Subcutaneous_Tissue.csv</a></li>
<li><a href="../PGP_Trait_Disease_Survey_2012_Vision_and_hearing.csv">PGP_Trait_Disease_Survey_2012_Vision_and_hearing.csv</a></li>
<li><a href="../PGP_Basic_Phenotypes_Survey_2015.csv">PGP_Basic_Phenotypes_Survey_2015.csv</a></li>
</ul>
</p>
<p>
The schema for the SQLite database is available as well:
<ul>
<li><a href='../db/untap-db.sql'>SQLite Schema</a></li>
</ul>
</p>
<p>
All the above Harvard Personal Genome Project data is available under <img src="CC0.png" alt="CC0">.
</p>
</div>
<div class='tab-pane' id='tab-bargraph'>
<script>
function demographics_plot(type) {
if (type==0) {
} else if (type==1) {
} else if (type==2) {
} else if (type==3) {
}
}
</script>
<div class='btn-group'>
<h1>Summary Information</h1>
<button type='button' class='btn btn-default dropdown-toggle' data-toggle='dropdown' aria-haspopup="true" aria-expanded="false">
Summary<span class="caret"></span>
</button>
<ul class="dropdown-menu">
<li><a href="#" onclick="plot_survey_bargraph('graph', 'Sex/Gender', 'Sex/Gender');" >Sex/Gender</a></li>
<li><a href="#" onclick="plot_survey_bargraph('graph', 'Race/ethnicity', 'Race/ethnicity');" >Race/ethnicity</a></li>
<li><a href="#" onclick="plot_survey_bargraph('graph', 'Age', 'Age');" >Age</a></li>
<li><a href="#" onclick="plot_survey_bargraph('graph', 'Year of birth', 'Year of birth');" >Year of birth</a></li>
<li><a href="#" onclick="plot_simple_bargraph('graph', 'demographics', 'blood_type', 50, 'Blood Type');" >Bloodtype</a></li>
<li><a href="#" onclick="plot_simple_bargraph('graph', 'demographics', 'race', 50, 'Race');" >Race (Demographics)</a></li>
<li><a href="#" onclick="plot_simple_bargraph('graph', 'allergies', 'name', 50, 'Allergies');" >Allergies (top 50)</a></li>
<li><a href="#" onclick="plot_simple_bargraph('graph', 'conditions', 'name', 50, 'Conditions');" >Conditions (top 50)</a></li>
<li><a href="#" onclick="plot_simple_bargraph('graph', 'immunizations', 'name', 50, 'Immunizations');" >Immunizations (top 50)</a></li>
<li><a href="#" onclick="plot_simple_bargraph('graph', 'medications', 'name', 50, 'Medications');" >Medications (top 50)</a></li>
<li><a href="#" onclick="plot_simple_bargraph('graph', 'procedures', 'name', 50, 'Procedures');" >Procedures (top 50)</a></li>
<li role="separator" class="divider"></li>
<li><a href="#" onclick='plot_survey_bargraph_grouped("graph", {"primary": "Age","secondary":"Sex/Gender","secondary_restrict":["Male","Female"]}, "Sex/Gender by Age");' >Age grouped by gender</a></li>
<li><a href="#" onclick='plot_survey_bargraph_grouped("graph", {"primary": "Year of birth","secondary":"Sex/Gender","secondary_restrict":["Male","Female"]}, "Sex/Gender by Year of Birth");' >Year of birth grouped by gender</a></li>
<li><a href="#" onclick='plot_race_bloodtype_grouped_bargraph("graph");' >Bloodtype by race</a></li>
<li role="separator" class="divider"></li>
<li><a href="#" onclick="plot_uploaded_data_summary('graph');" >Uploaded data</a></li>
</ul>
</div>
<div id='graph'></div>
</div>
<div class='tab-pane' id='tab-variant-matrix'>
<h1>Subject/Variant</h1>
<div class='btn-group'>
<button type='button' class='btn btn-default dropdown-toggle' data-toggle='dropdown'>
Examples<span class="caret"></span>
</button>
<ul class="dropdown-menu">
<li><a href="#" onclick="suff_eval_matrix_example('graph-matrix');" >Example 1 (suff. eval filter)</a></li>
<li><a href="#" onclick="pathogenic_matrix_example('graph-matrix');" >Example 2 (pathogenic filter)</a></li>
</ul>
</div>
<div id='graph-matrix'></div>
</div> <!-- tabpanel -->
<div class='tab-pane' id='tab-custom-query'>
<h1>Custom Visualization</h1>
<p>
Each row should have an <code>x</code> field followed by any number of labelled y fields. The results will be grouped by each row. See the examples on the lower right for some canned queries.
</p>
<div class='form-group'>
<textarea class='form-control' rows='6' id='custom-textarea'>??</textarea>
</div>
<div class='row'>
<div class='col-md-9'>
<button class='btn btn-info' onclick='untap_custom_viz();'>Query</button>
</div>
<div class='col-md-3'>
<div class='btn-group btn-group-xs' role='group'>
<button type='button' class='btn btn-default' onclick='untap_custom_query("select count(human_id) \"Year of birth\",\n phenotype x\nfrom survey\nwhere phenotype_category = \"Participant_Survey:Year of birth\" and\n phenotype != \"\" and phenotype != \"No response\"\ngroup by x;");'>Year of birth example</button>
<button type='button' class='btn btn-default' onclick='untap_custom_query(
"select p.race x,\n sum( p.blood_type = \"O+\") \"O+\", sum( p.blood_type = \"O-\") \"O-\",\n sum( p.blood_type = \"A+\") \"A+\", sum( p.blood_type = \"A-\") \"A-\",\n sum( p.blood_type = \"B+\") \"B+\", sum( p.blood_type = \"B-\") \"B-\", sum( p.blood_type = \"AB+\") \"AB+\", sum( p.blood_type = \"AB-\") \"AB-\"\nfrom demographics p\nwhere race != \"\" and race != \"Caucasian (White)\" group by x"
);'>Bloodtype by race example</button>
<button type='button' class='btn btn-default' onclick='untap_custom_query(
"select p0.phenotype x,\n sum( p1.phenotype = \"Male\") \"Male\", sum( p1.phenotype = \"Female\") \"Female\"\nfrom survey p0, survey p1\nwhere p0.phenotype_category = \"Participant_Survey:Age\" and p0.human_id = p1.human_id and p1.phenotype_category = \"Participant_Survey:Sex/Gender\"\ngroup by x"
);'>Gender by age example </button>
</div>
</div>
</div>
<div id='graph-custom'></div>
</div> <!-- tabpanel -->
<div class='tab-pane' id='tab-schema'>
<h1>SQLite Database Schema</h1>
<!-- schema table start -->
<table class='table table-bordered'>
<tr>
<th style='width:25%;'><small>table</small></th>
<th style='width:40%;'><small>field</small></th>
<th style='width:25%;'><small>type</small></th>
<th style='width:10%;'><small>example</small></th>
</tr>
<tr>
<td rowspan='5'><b style='font-size:125%;'>survey</b></td>
<td><code>id</code></td>
<td><mark>int</mark></td>
<td><em>123</em></td>
</tr>
<tr>
<td><code>human_id</code></td>
<td><mark>string</mark></td>
<td><em>hu826751</em></td>
</tr>
<tr>
<td><code>date</code></td>
<td><mark>datetime</mark></td>
<td><em>2015-06-23 10:30:01</em></td>
</tr>
<tr>
<td><code>phenotype_category</code></td>
<td><mark>string</mark></td>
<td><em>Participant_Survey:Age</em></td>
</tr>
<tr>
<td><code>phenotype</code></td>
<td><mark>string</mark></td>
<td><em>30-39 years </em></td>
</tr>
<tr>
<td rowspan='8'><b style='font-size:125%;'>specimens</b></td>
<td><code>id</code></td>
<td><mark>int</mark></td>
<td><em>123</em></td>
</tr>
<tr>
<td><code>human_id</code></td>
<td><mark>string</mark></td>
<td><em>hu826751</em></td>
</tr>
<tr>
<td><code>href</code></td>
<td><mark>string</mark></td>
<td><em>https://my.pgp-hms.org/collection_events/1</em></td>
</tr>
<tr>
<td><code>description</code></td>
<td><mark>string</mark></td>
<td><em>PGP Blood Collection</em></td>
</tr>
<tr>
<td><code>log_description</code></td>
<td><mark>string</mark></td>
<td><em>Sample 92175438 (whole blood) received 2013-05-06 21:27:59 UTC by hu826751.</em></td>
</tr>
<tr>
<td><code>log_date</code></td>
<td><mark>datetime</mark></td>
<td><em>2011-09-15 17:09:29 UTC</em></td>
</tr>
<tr>
<td><code>log_text</code></td>
<td><mark>string</mark></td>
<td><em>hu826751</em></td>
</tr>
<tr>
<td><code>log_description</code></td>
<td><mark>string</mark></td>
<td><em>Sample received by participant</em></td>
</tr>
<tr>
<td rowspan='10'><b style='font-size:125%;'>uploaded_data</b></td>
<td><code>id</code></td>
<td><mark>int</mark></td>
<td><em>123</em></td>
</tr>
<tr>
<td><code>human_id</code></td>
<td><mark>string</mark></td>
<td><em>hu826751</em></td>
</tr>
<tr>
<td><code>date</code></td>
<td><mark>string</mark></td>
<td><em>2015-06-23 10:30:01</em></td>
</tr>
<tr>
<td><code>data_type</code></td>
<td><mark>string</mark></td>
<td><em>Complete Genomics</em></td>
</tr>
<tr>
<td><code>source</code></td>
<td><mark>string</mark></td>
<td><em>PGP</em></td>
</tr>
<tr>
<td><code>name</code></td>
<td><mark>string</mark></td>
<td><em>CGI sample: GS03052-DNA_B01</em></td>
</tr>
<tr>
<td><code>download_description</code></td>
<td><mark>string</mark></td>
<td><em>(101.3 MB)</em></td>
</tr>
<tr>
<td><code>download_url</code></td>
<td><mark>string</mark></td>
<td><em>http://evidence.pgp-hms.org/genome_download.php?download_genome_id=8e2fb8975d5a05735c56505e1697ad1fa1df73ab&amp;download_nickname=CGI+sample%3A+GS03052-DNA_B01</em></td>
</tr>
<tr>
<td><code>report_description</code></td>
<td><mark>string</mark></td>
<td><em>male 2,743,807,495 positions covered ref. b37</em></td>
</tr>
<tr>
<td><code>report_url</code></td>
<td><mark>string</mark></td>
<td><em>http://evidence.pgp-hms.org/genomes?display_genome_id=8e2fb8975d5a05735c56505e1697ad1fa1df73ab</em></td>
</tr>
<tr>
<td rowspan='6'><b style='font-size:125%;'>allergies</b></td>
<td><code>id</code></td>
<td><mark>int</mark></td>
<td><em>123</em></td>
</tr>
<tr>
<td><code>human_id</code></td>
<td><mark>string</mark></td>
<td><em>hu826751</em></td>
</tr>
<tr>
<td><code>name</code></td>
<td><mark>string</mark></td>
<td><em>Honey Bee Venom Protein</em></td>
</tr>
<tr>
<td><code>severity</code></td>
<td><mark>string</mark></td>
<td><em>MILD</em></td>
</tr>
<tr>
<td><code>start_date</code></td>
<td><mark>string</mark></td>
<td><em>2000-08-01</em></td>
</tr>
<tr>
<td><code>end_date</code></td>
<td><mark>string</mark></td>
<td><em>2010-05-01</em></td>
</tr>
<tr>
<td rowspan='5'><b style='font-size:125%;'>conditions</b></td>
<td><code>id</code></td>
<td><mark>int</mark></td>
<td><em>123</em></td>
</tr>
<tr>
<td><code>human_id</code></td>
<td><mark>string</mark></td>
<td><em>hu826751</em></td>
</tr>
<tr>
<td><code>name</code></td>
<td><mark>string</mark></td>
<td><em>Chest Pain</em></td>
</tr>
<tr>
<td><code>start_date</code></td>
<td><mark>string</mark></td>
<td><em>2001-08-06</em></td>
</tr>
<tr>
<td><code>end_date</code></td>
<td><mark>string</mark></td>
<td><em>2010-03-01</em></td>
</tr>
<tr>
<td rowspan='8'><b style='font-size:125%;'>demographics</b></td>
<td><code>id</code></td>
<td><mark>int</mark></td>
<td><em>123</em></td>
</tr>
<tr>
<td><code>human_id</code></td>
<td><mark>string</mark></td>
<td><em>hu826751</em></td>
</tr>
<tr>
<td><code>date_of_birth</code></td>
<td><mark>string</mark></td>
<td><em>1968-11-01 (46 years old)</em></td>
</tr>
<tr>
<td><code>gender</code></td>
<td><mark>string</mark></td>
<td><em>Female</em></td>
</tr>
<tr>
<td><code>weight</code></td>
<td><mark>string</mark></td>
<td><em>145lbs (66kg)</em></td>
</tr>
<tr>
<td><code>height</code></td>
<td><mark>string</mark></td>
<td><em>5ft 10in (177cm)</em></td>
</tr>
<tr>
<td><code>blood_type</code></td>
<td><mark>string</mark></td>
<td><em>A+</em></td>
</tr>
<tr>
<td><code>race</code></td>
<td><mark>string</mark></td>
<td><em>White</em></td>
</tr>
<tr>
<td rowspan='4'><b style='font-size:125%;'>geographic_information</b></td>
<td><code>id</code></td>
<td><mark>int</mark></td>
<td><em>123</em></td>
</tr>
<tr>
<td><code>human_id</code></td>
<td><mark>string</mark></td>
<td><em>hu826751</em></td>
</tr>
<tr>
<td><code>state</code></td>
<td><mark>string</mark></td>
<td><em>New York</em></td>
</tr>
<tr>
<td><code>zip</code></td>
<td><mark>string</mark></td>
<td><em>10012</em></td>
</tr>
<tr>
<td rowspan='3'><b style='font-size:125%;'>enrollment_date</b></td>
<td><code>id</code></td>
<td><mark>int</mark></td>
<td><em>123</em></td>
</tr>
<tr>
<td><code>human_id</code></td>
<td><mark>string</mark></td>
<td><em>hu826751</em></td>
</tr>
<tr>
<td><code>enrollment_date</code></td>
<td><mark>string</mark></td>
<td><em>2009-07-01</em></td>
</tr>
<tr>
<td rowspan='4'><b style='font-size:125%;'>immunizations</b></td>
<td><code>id</code></td>
<td><mark>int</mark></td>
<td><em>123</em></td>
</tr>
<tr>
<td><code>human_id</code></td>
<td><mark>string</mark></td>
<td><em>hu826751</em></td>
</tr>
<tr>
<td><code>name</code></td>
<td><mark>string</mark></td>
<td><em>Tetanus/Diphtheria/Pertussis (Tdap) Vaccine</em></td>
</tr>
<tr>
<td><code>date</code></td>
<td><mark>string</mark></td>
<td><em>2008-08-13</em></td>
</tr>
<tr>
<td rowspan='7'><b style='font-size:125%;'>medications</b></td>
<td><code>id</code></td>
<td><mark>int</mark></td>
<td><em>123</em></td>
</tr>
<tr>
<td><code>human_id</code></td>
<td><mark>string</mark></td>
<td><em>hu826751</em></td>
</tr>
<tr>
<td><code>name</code></td>
<td><mark>string</mark></td>
<td><em>Viibryd</em></td>
</tr>
<tr>
<td><code>dosage</code></td>
<td><mark>string</mark></td>
<td><em>50 Milligram (mg)</em></td>
</tr>
<tr>
<td><code>frequency</code></td>
<td><mark>string</mark></td>
<td><em>Take 1, 2 Times Daily</em></td>
</tr>
<tr>
<td><code>start_date</code></td>
<td><mark>string</mark></td>
<td><em>2013-01-01</em></td>
</tr>
<tr>
<td><code>end_date</code></td>
<td><mark>string</mark></td>
<td><em>2013-02-01</em></td>
</tr>
<tr>
<td rowspan='4'><b style='font-size:125%;'>procedures</b></td>
<td><code>id</code></td>
<td><mark>int</mark></td>
<td><em>123</em></td>
</tr>
<tr>
<td><code>human_id</code></td>
<td><mark>string</mark></td>
<td><em>hu826751</em></td>
</tr>
<tr>
<td><code>name</code></td>
<td><mark>string</mark></td>
<td><em>ELECTROCARDIOGRAM</em></td>
</tr>
<tr>
<td><code>date</code></td>
<td><mark>string</mark></td>
<td><em>2011-10-20</em></td>
</tr>
<tr>
<td rowspan='5'><b style='font-size:125%;'>test_results</b></td>
<td><code>id</code></td>
<td><mark>int</mark></td>
<td><em>123</em></td>
</tr>
<tr>
<td><code>human_id</code></td>
<td><mark>string</mark></td>
<td><em>hu826751</em></td>
</tr>
<tr>
<td><code>name</code></td>
<td><mark>string</mark></td>
<td><em>Height</em></td>
</tr>
<tr>
<td><code>result</code></td>
<td><mark>string</mark></td>
<td><em>77 inches</em></td>
</tr>
<tr>
<td><code>date</code></td>
<td><mark>string</mark></td>
<td><em>2009-07-01</em></td>
</tr>
<tr>
<td rowspan='2'><b style='font-size:125%;'>suff_record</b></td>
<td><code>id</code></td>
<td><mark>int</mark></td>
<td><em>123</em></td>
</tr>
<tr>
<td><code>json_record</code></td>
<td><mark>string</mark></td>
<td><em>["benign","0.000114142",4,"Low","Uncertain","OFD1-Q545R",true,"benign","Homozygous",-1]</em></td>
</tr>
<tr>
<td rowspan='3'><b style='font-size:125%;'>human_suff_record_map</b></td>
<td><code>id</code></td>
<td><mark>int</mark></td>
<td><em>123</em></td>
</tr>
<tr>
<td><code>uploaded_data_id</code></td>
<td><mark>int</mark></td>
<td><em>465</em></td>
</tr>
<tr>
<td><code>suff_record_index</code></td>
<td><mark>int</mark></td>
<td><em>89</em></td>
</tr>
<tr>
<td rowspan='2'><b style='font-size:125%;'>insuff_record</b></td>
<td><code>id</code></td>
<td><mark>int</mark></td>
<td><em>123</em></td>
</tr>
<tr>
<td><code>json_record</code></td>
<td><mark>string</mark></td>
<td><em>["","0.000",1,"","","ACOT2-M455V",false,"","Heterozygous",-1]</em></td>
</tr>
<tr>
<td rowspan='3'><b style='font-size:125%;'>human_insuff_record_map</b></td>
<td><code>id</code></td>
<td><mark>int</mark></td>
<td><em>123</em></td>
</tr>
<tr>
<td><code>uploaded_data_id</code></td>
<td><mark>int</mark></td>
<td><em>465</em></td>
</tr>
<tr>
<td><code>insuff_record_index</code></td>
<td><mark>int</mark></td>
<td><em>130</em></td>
</tr>
</table>
</div> <!-- tabpanel -->
<!-- database schema -->
<script>
</script>
<div class='tab-pane' id='tab-examples'>
<h1>Query examples</h1>
<div class='col-md-6'>
<div class='btn-group btn-group-justified' role='group'>
<div class='btn-group btn-group-xs' role='group'>
<button type='button' class='btn btn-default' onclick='untap_example_query("survey");'>survey</button>
</div>
<div class='btn-group btn-group-xs' role='group'>