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metadataview.py
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from pyqtgraph.parametertree import ParameterTree
from pyqtgraph.parametertree.parameterTypes import Parameter, GroupParameter
from collections import deque, OrderedDict, defaultdict
from qtpy.QtGui import QStandardItem, QStandardItemModel
from qtpy.QtCore import QItemSelectionModel, Signal
import sys
import uuid
import datetime
import numpy as np
import warnings
from typing import Iterable, Sequence
from xicam.core import msg
from xicam.core.data import NonDBHeader
from xicam.gui.patches.PyQtGraph import CounterGroupParameter, LazyGroupParameter
# TODO: map list to groupparameter
# TODO: suggest integration of type mapping into pyqtgraph
typemap = {
int: "int",
float: "float",
np.float64: "float",
str: "str",
dict: "lazygroup",
OrderedDict: "lazygroup",
list: "lazygroup",
type(None): None,
tuple: "lazygroup",
datetime.datetime: "str",
np.float: "float",
np.ndarray: "ndarray",
np.int: "int",
}
class MetadataWidgetBase(ParameterTree):
def __init__(self, *args, **kwargs):
self.excludedkeys = kwargs.get('excludedkeys')
if 'excludedkeys' in kwargs:
del kwargs['excludedkeys']
super(MetadataWidgetBase, self).__init__(*args, **kwargs)
LazyGroupParameter.itemClass.initialize_treewidget(self)
self.kwargs = kwargs
def insert(self, doctype: str, document, groups: dict):
if doctype == "start":
for group in groups.values():
group.clearChildren()
try:
new_children = MetadataView._from_dict(document, self.excludedkeys)
except Exception as ex:
msg.logError(ex)
print(f"failed to make children for {doctype}")
else:
# TODO: add responsive design to uid display
group = groups[doctype]
group.addChildren(
[
GroupParameter(
name=document["uid"][:6], value=None, type=None, children=new_children, expanded=False, readonly=True
)
]
)
@staticmethod
def _from_dict(metadata: Iterable, excludedkeys=None):
if isinstance(metadata, Sequence):
metadata = OrderedDict(enumerate(metadata))
metadata = MetadataView._strip_reserved(metadata, excludedkeys)
children = []
for key, value in metadata.items():
subchildren = []
if typemap.get(type(value), None) in ["group", "lazygroup"]:
subchildren = MetadataView._from_dict(value)
key = f"{str(key)} {type(value)}"
value = None
try:
children.append(
Parameter.create(
name=str(key),
value=value,
type=typemap[type(value)],
children=subchildren,
expanded=False,
readonly=True,
)
)
except KeyError:
warnings.warn(f"Failed to display a {type(value)}: {value}")
children.append(
Parameter.create(
name=str(key),
value=repr(value),
type=typemap[str],
children=subchildren,
expanded=False,
readonly=True,
)
)
return children
@staticmethod
def _strip_reserved(metadata: dict, excludedkeys=None):
if not excludedkeys:
excludedkeys = []
metadata = metadata.copy()
for key in excludedkeys:
if key in metadata:
del metadata[key]
return metadata
class MetadataWidget(MetadataWidgetBase):
def __init__(self, *args, **kwargs):
super(MetadataWidget, self).__init__(*args, **kwargs)
self.header = None # type: HeaderParameter
self.groups = dict()
self.reset()
def doc_consumer(self, name, doc):
if name == "start":
self.header.setName(doc["uid"])
super(MetadataWidget, self).insert(name, doc, self.groups)
def reset(self):
self.header = HeaderParameter(name=" ")
self.groups = {group.name(): group for group in self.header.children()}
self.setParameters(self.header)
class MetadataView(MetadataWidgetBase):
sigUpdate = Signal()
def __init__(self, headermodel: QStandardItemModel, selectionmodel: QItemSelectionModel, *args, **kwargs):
super(MetadataView, self).__init__(*args, **kwargs)
self._seen = set()
self._last_uid = None
self._thread_id = "MetadataView" + str(uuid.uuid4())
self.headermodel = headermodel
self.selectionmodel = selectionmodel
self.selectionmodel.currentChanged.connect(self.update)
self.sigUpdate.connect(self.update)
self.update()
def update(self):
index = self.selectionmodel.currentIndex()
if not index.isValid():
return
header = self.headermodel.itemFromIndex(index).header # type: NonDBHeader
if header.startdoc["uid"] != self._last_uid:
self._seen = set()
if not isinstance(header, HeaderBuffer):
headerbuffer = HeaderBuffer(
header.startdoc["uid"], HeaderParameter(name=header.startdoc["uid"]), docs=header.documents()
)
param = headerbuffer.param
groups = param.groups
# TODO: make compatible with actively streaming header
# filter out documents already emitted in the stream
for doctype, document in header.stream():
if document["uid"] in self._seen:
continue
self._seen.add(document["uid"])
self.insert(doctype, document, groups)
if headerbuffer.uid != self._last_uid:
self._last_uid = headerbuffer.uid
# try:
self.setParameters(param, showTop=False)
class HeaderParameter(GroupParameter):
def __init__(self, *args, **kwargs):
super(HeaderParameter, self).__init__(*args, **kwargs)
self.groups = {
"start": CounterGroupParameter(name="start", title="Start", expanded=False),
"descriptor": CounterGroupParameter(name="descriptor", title="Descriptors", expanded=False),
"event": CounterGroupParameter(name="event", title="Events", expanded=False),
"stop": CounterGroupParameter(name="stop", title="Stop", expanded=False),
}
self.addChildren(self.groups.values())
class HeaderBuffer:
def __init__(self, uid, param: GroupParameter, docs=None):
self.uid = uid
self.buf = deque()
self.param = param
for name, doc in docs:
self.buf.append((name, doc))
def stream(self, *args):
yield from self.buf
class MDVConusumer(MetadataView):
def __init__(self, *args, **kwargs):
super().__init__(*args, **kwargs)
self._buffers = {}
self._descriptor_map = {}
def doc_consumer(self, name, doc):
if name == "start":
uid = doc["uid"]
item = QStandardItem(doc["uid"])
item.header = self._buffers[uid] = HeaderBuffer(uid, HeaderParameter(name="uid"))
self.headermodel.appendRow(item)
self.selectionmodel.setCurrentIndex(self.headermodel.indexFromItem(item), QItemSelectionModel.ClearAndSelect)
elif name == "descriptor":
uid = self._descriptor_map[doc["uid"]] = doc["run_start"]
elif name == "event":
uid = self._descriptor_map[doc["descriptor"]]
elif name == "stop":
uid = doc["run_start"]
else:
raise ValueError
buffer = self._buffers[uid].buf # type: deque
buffer.append((name, doc))
self.sigUpdate.emit()
def show_row_n(self, n):
item = self.headermodel.item(n)
if item is None:
return
self.selectionmodel.setCurrentIndex(self.headermodel.indexFromItem(item), QItemSelectionModel.ClearAndSelect)
self.update()
if __name__ == "__main__":
import os
os.environ["OPHYD_CONTROL_LAYER"] = "caproto"
from qtpy import QtWidgets
from qtpy import QtCore
from qtpy import QtGui
from mily.runengine import spawn_RE
from mily.widgets import ControlGui, Count, Scan1D, MotorSelector, DetectorSelector, MISpin
import bluesky.plans as bp
from ophyd.sim import hw
import matplotlib
matplotlib.interactive(True)
class MDVWithButtons(QtWidgets.QWidget):
def __init__(self, mdv, *args, **kwargs):
super().__init__(*args, **kwargs)
self.mdv = mdv
w_layout = QtWidgets.QVBoxLayout()
w_layout.addWidget(mdv)
button_layout = QtWidgets.QHBoxLayout()
w_layout.addLayout(button_layout)
self.spinner = spinner = MISpin("run")
w_layout.addWidget(spinner)
spinner.setRange(0, 100)
def on_change(n):
self.mdv.show_row_n(n)
spinner.valueChanged.connect(on_change)
self.setLayout(w_layout)
def doc_consumer(self, name, doc):
self.mdv.doc_consumer(name, doc)
self.spinner.setRange(0, self.mdv.headermodel.rowCount() - 1)
app = QtWidgets.QApplication.instance()
if app is None:
app = QtWidgets.QApplication([b"Live data demo"])
app.lastWindowClosed.connect(app.quit)
headermodel = QtGui.QStandardItemModel()
selectionmodel = QtCore.QItemSelectionModel(headermodel)
metadataview = MDVConusumer(headermodel, selectionmodel)
view_box = MDVWithButtons(metadataview)
hw = hw()
hw.motor.set(15)
hw.motor.delay = 0.1
hw.motor1.delay = 0.2
hw.motor2.delay = 0.3
hw.det.kind = "hinted"
hw.det1.kind = "hinted"
hw.det2.kind = "hinted"
RE, queue, thread, teleport = spawn_RE()
cg = ControlGui(
queue,
teleport,
Count("Count", bp.count, DetectorSelector(detectors=[hw.det, hw.det1, hw.det2])),
Scan1D(
"1D absolute scan",
bp.scan,
MotorSelector([hw.motor, hw.motor1, hw.motor2]),
DetectorSelector(detectors=[hw.det, hw.det1, hw.det2]),
),
Scan1D(
"1D relative scan",
bp.rel_scan,
MotorSelector([hw.motor, hw.motor1, hw.motor2]),
DetectorSelector(detectors=[hw.det, hw.det1, hw.det2]),
),
live_widget=view_box,
)
cg.show()
sys.exit(app.exec_())