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test_api.py
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# -*- coding: utf-8 -*-
from __future__ import print_function
import pytest
# pylint: disable-msg=W0612,E1101
from copy import deepcopy
import sys
from distutils.version import LooseVersion
from pandas.compat import range, lrange
from pandas import compat
from numpy.random import randn
import numpy as np
from pandas import DataFrame, Series, date_range, timedelta_range
import pandas as pd
from pandas.util.testing import (assert_almost_equal,
assert_series_equal,
assert_frame_equal)
import pandas.util.testing as tm
from pandas.tests.frame.common import TestData
class SharedWithSparse(object):
"""
A collection of tests DataFrame and SparseDataFrame can share.
In generic tests on this class, use ``self._assert_frame_equal()`` and
``self._assert_series_equal()`` which are implemented in sub-classes
and dispatch correctly.
"""
def _assert_frame_equal(self, left, right):
"""Dispatch to frame class dependent assertion"""
raise NotImplementedError
def _assert_series_equal(self, left, right):
"""Dispatch to series class dependent assertion"""
raise NotImplementedError
def test_copy_index_name_checking(self):
# don't want to be able to modify the index stored elsewhere after
# making a copy
for attr in ('index', 'columns'):
ind = getattr(self.frame, attr)
ind.name = None
cp = self.frame.copy()
getattr(cp, attr).name = 'foo'
assert getattr(self.frame, attr).name is None
def test_getitem_pop_assign_name(self):
s = self.frame['A']
assert s.name == 'A'
s = self.frame.pop('A')
assert s.name == 'A'
s = self.frame.loc[:, 'B']
assert s.name == 'B'
s2 = s.loc[:]
assert s2.name == 'B'
def test_get_value(self):
for idx in self.frame.index:
for col in self.frame.columns:
result = self.frame.get_value(idx, col)
expected = self.frame[col][idx]
tm.assert_almost_equal(result, expected)
def test_add_prefix_suffix(self):
with_prefix = self.frame.add_prefix('foo#')
expected = pd.Index(['foo#%s' % c for c in self.frame.columns])
tm.assert_index_equal(with_prefix.columns, expected)
with_suffix = self.frame.add_suffix('#foo')
expected = pd.Index(['%s#foo' % c for c in self.frame.columns])
tm.assert_index_equal(with_suffix.columns, expected)
with_pct_prefix = self.frame.add_prefix('%')
expected = pd.Index(['%{}'.format(c) for c in self.frame.columns])
tm.assert_index_equal(with_pct_prefix.columns, expected)
with_pct_suffix = self.frame.add_suffix('%')
expected = pd.Index(['{}%'.format(c) for c in self.frame.columns])
tm.assert_index_equal(with_pct_suffix.columns, expected)
def test_get_axis(self):
f = self.frame
assert f._get_axis_number(0) == 0
assert f._get_axis_number(1) == 1
assert f._get_axis_number('index') == 0
assert f._get_axis_number('rows') == 0
assert f._get_axis_number('columns') == 1
assert f._get_axis_name(0) == 'index'
assert f._get_axis_name(1) == 'columns'
assert f._get_axis_name('index') == 'index'
assert f._get_axis_name('rows') == 'index'
assert f._get_axis_name('columns') == 'columns'
assert f._get_axis(0) is f.index
assert f._get_axis(1) is f.columns
tm.assert_raises_regex(
ValueError, 'No axis named', f._get_axis_number, 2)
tm.assert_raises_regex(
ValueError, 'No axis.*foo', f._get_axis_name, 'foo')
tm.assert_raises_regex(
ValueError, 'No axis.*None', f._get_axis_name, None)
tm.assert_raises_regex(ValueError, 'No axis named',
f._get_axis_number, None)
def test_keys(self):
getkeys = self.frame.keys
assert getkeys() is self.frame.columns
def test_column_contains_typeerror(self):
try:
self.frame.columns in self.frame
except TypeError:
pass
def test_not_hashable(self):
df = self.klass([1])
pytest.raises(TypeError, hash, df)
pytest.raises(TypeError, hash, self.empty)
def test_new_empty_index(self):
df1 = self.klass(randn(0, 3))
df2 = self.klass(randn(0, 3))
df1.index.name = 'foo'
assert df2.index.name is None
def test_array_interface(self):
with np.errstate(all='ignore'):
result = np.sqrt(self.frame)
assert isinstance(result, type(self.frame))
assert result.index is self.frame.index
assert result.columns is self.frame.columns
self._assert_frame_equal(result, self.frame.apply(np.sqrt))
def test_get_agg_axis(self):
cols = self.frame._get_agg_axis(0)
assert cols is self.frame.columns
idx = self.frame._get_agg_axis(1)
assert idx is self.frame.index
pytest.raises(ValueError, self.frame._get_agg_axis, 2)
def test_nonzero(self):
assert self.empty.empty
assert not self.frame.empty
assert not self.mixed_frame.empty
# corner case
df = DataFrame({'A': [1., 2., 3.],
'B': ['a', 'b', 'c']},
index=np.arange(3))
del df['A']
assert not df.empty
def test_iteritems(self):
df = self.klass([[1, 2, 3], [4, 5, 6]], columns=['a', 'a', 'b'])
for k, v in compat.iteritems(df):
assert isinstance(v, self.klass._constructor_sliced)
def test_items(self):
# issue #17213, #13918
cols = ['a', 'b', 'c']
df = DataFrame([[1, 2, 3], [4, 5, 6]], columns=cols)
for c, (k, v) in zip(cols, df.items()):
assert c == k
assert isinstance(v, Series)
assert (df[k] == v).all()
def test_iter(self):
assert tm.equalContents(list(self.frame), self.frame.columns)
def test_iterrows(self):
for k, v in self.frame.iterrows():
exp = self.frame.loc[k]
self._assert_series_equal(v, exp)
for k, v in self.mixed_frame.iterrows():
exp = self.mixed_frame.loc[k]
self._assert_series_equal(v, exp)
def test_itertuples(self):
for i, tup in enumerate(self.frame.itertuples()):
s = self.klass._constructor_sliced(tup[1:])
s.name = tup[0]
expected = self.frame.iloc[i, :].reset_index(drop=True)
self._assert_series_equal(s, expected)
df = self.klass({'floats': np.random.randn(5),
'ints': lrange(5)}, columns=['floats', 'ints'])
for tup in df.itertuples(index=False):
assert isinstance(tup[1], np.integer)
df = self.klass(data={"a": [1, 2, 3], "b": [4, 5, 6]})
dfaa = df[['a', 'a']]
assert (list(dfaa.itertuples()) ==
[(0, 1, 1), (1, 2, 2), (2, 3, 3)])
assert (repr(list(df.itertuples(name=None))) ==
'[(0, 1, 4), (1, 2, 5), (2, 3, 6)]')
tup = next(df.itertuples(name='TestName'))
if sys.version >= LooseVersion('2.7'):
assert tup._fields == ('Index', 'a', 'b')
assert (tup.Index, tup.a, tup.b) == tup
assert type(tup).__name__ == 'TestName'
df.columns = ['def', 'return']
tup2 = next(df.itertuples(name='TestName'))
assert tup2 == (0, 1, 4)
if sys.version >= LooseVersion('2.7'):
assert tup2._fields == ('Index', '_1', '_2')
df3 = DataFrame(dict(('f' + str(i), [i]) for i in range(1024)))
# will raise SyntaxError if trying to create namedtuple
tup3 = next(df3.itertuples())
assert not hasattr(tup3, '_fields')
assert isinstance(tup3, tuple)
def test_len(self):
assert len(self.frame) == len(self.frame.index)
def test_as_matrix(self):
frame = self.frame
mat = frame.as_matrix()
frameCols = frame.columns
for i, row in enumerate(mat):
for j, value in enumerate(row):
col = frameCols[j]
if np.isnan(value):
assert np.isnan(frame[col][i])
else:
assert value == frame[col][i]
# mixed type
mat = self.mixed_frame.as_matrix(['foo', 'A'])
assert mat[0, 0] == 'bar'
df = self.klass({'real': [1, 2, 3], 'complex': [1j, 2j, 3j]})
mat = df.as_matrix()
assert mat[0, 0] == 1j
# single block corner case
mat = self.frame.as_matrix(['A', 'B'])
expected = self.frame.reindex(columns=['A', 'B']).values
assert_almost_equal(mat, expected)
def test_transpose(self):
frame = self.frame
dft = frame.T
for idx, series in compat.iteritems(dft):
for col, value in compat.iteritems(series):
if np.isnan(value):
assert np.isnan(frame[col][idx])
else:
assert value == frame[col][idx]
# mixed type
index, data = tm.getMixedTypeDict()
mixed = self.klass(data, index=index)
mixed_T = mixed.T
for col, s in compat.iteritems(mixed_T):
assert s.dtype == np.object_
def test_swapaxes(self):
df = self.klass(np.random.randn(10, 5))
self._assert_frame_equal(df.T, df.swapaxes(0, 1))
self._assert_frame_equal(df.T, df.swapaxes(1, 0))
self._assert_frame_equal(df, df.swapaxes(0, 0))
pytest.raises(ValueError, df.swapaxes, 2, 5)
def test_axis_aliases(self):
f = self.frame
# reg name
expected = f.sum(axis=0)
result = f.sum(axis='index')
assert_series_equal(result, expected)
expected = f.sum(axis=1)
result = f.sum(axis='columns')
assert_series_equal(result, expected)
def test_more_asMatrix(self):
values = self.mixed_frame.as_matrix()
assert values.shape[1] == len(self.mixed_frame.columns)
def test_repr_with_mi_nat(self):
df = self.klass({'X': [1, 2]},
index=[[pd.NaT, pd.Timestamp('20130101')], ['a', 'b']])
res = repr(df)
exp = ' X\nNaT a 1\n2013-01-01 b 2'
assert res == exp
def test_iteritems_names(self):
for k, v in compat.iteritems(self.mixed_frame):
assert v.name == k
def test_series_put_names(self):
series = self.mixed_frame._series
for k, v in compat.iteritems(series):
assert v.name == k
def test_empty_nonzero(self):
df = self.klass([1, 2, 3])
assert not df.empty
df = self.klass(index=[1], columns=[1])
assert not df.empty
df = self.klass(index=['a', 'b'], columns=['c', 'd']).dropna()
assert df.empty
assert df.T.empty
empty_frames = [self.klass(),
self.klass(index=[1]),
self.klass(columns=[1]),
self.klass({1: []})]
for df in empty_frames:
assert df.empty
assert df.T.empty
def test_with_datetimelikes(self):
df = self.klass({'A': date_range('20130101', periods=10),
'B': timedelta_range('1 day', periods=10)})
t = df.T
result = t.get_dtype_counts()
expected = Series({'object': 10})
tm.assert_series_equal(result, expected)
class TestDataFrameMisc(SharedWithSparse, TestData):
klass = DataFrame
# SharedWithSparse tests use generic, klass-agnostic assertion
_assert_frame_equal = staticmethod(assert_frame_equal)
_assert_series_equal = staticmethod(assert_series_equal)
def test_values(self):
self.frame.values[:, 0] = 5.
assert (self.frame.values[:, 0] == 5).all()
def test_deepcopy(self):
cp = deepcopy(self.frame)
series = cp['A']
series[:] = 10
for idx, value in compat.iteritems(series):
assert self.frame['A'][idx] != value
def test_transpose_get_view(self):
dft = self.frame.T
dft.values[:, 5:10] = 5
assert (self.frame.values[5:10] == 5).all()
def test_inplace_return_self(self):
# re #1893
data = DataFrame({'a': ['foo', 'bar', 'baz', 'qux'],
'b': [0, 0, 1, 1],
'c': [1, 2, 3, 4]})
def _check_f(base, f):
result = f(base)
assert result is None
# -----DataFrame-----
# set_index
f = lambda x: x.set_index('a', inplace=True)
_check_f(data.copy(), f)
# reset_index
f = lambda x: x.reset_index(inplace=True)
_check_f(data.set_index('a'), f)
# drop_duplicates
f = lambda x: x.drop_duplicates(inplace=True)
_check_f(data.copy(), f)
# sort
f = lambda x: x.sort_values('b', inplace=True)
_check_f(data.copy(), f)
# sort_index
f = lambda x: x.sort_index(inplace=True)
_check_f(data.copy(), f)
# fillna
f = lambda x: x.fillna(0, inplace=True)
_check_f(data.copy(), f)
# replace
f = lambda x: x.replace(1, 0, inplace=True)
_check_f(data.copy(), f)
# rename
f = lambda x: x.rename({1: 'foo'}, inplace=True)
_check_f(data.copy(), f)
# -----Series-----
d = data.copy()['c']
# reset_index
f = lambda x: x.reset_index(inplace=True, drop=True)
_check_f(data.set_index('a')['c'], f)
# fillna
f = lambda x: x.fillna(0, inplace=True)
_check_f(d.copy(), f)
# replace
f = lambda x: x.replace(1, 0, inplace=True)
_check_f(d.copy(), f)
# rename
f = lambda x: x.rename({1: 'foo'}, inplace=True)
_check_f(d.copy(), f)