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sahi_predict
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# OBSS SAHI Tool
# Code written by Fatih C Akyon, 2020.
import logging
import os
import time
from typing import List, Optional
from sahi.utils.import_utils import is_available
# https://github.com/obss/sahi/issues/526
if is_available("torch"):
import torch
from functools import cmp_to_key
import numpy as np
from tqdm import tqdm
from sahi.auto_model import AutoDetectionModel
from sahi.models.base import DetectionModel
from sahi.postprocess.combine import (
GreedyNMMPostprocess,
LSNMSPostprocess,
NMMPostprocess,
NMSPostprocess,
PostprocessPredictions,
)
from sahi.prediction import ObjectPrediction, PredictionResult
from sahi.slicing import slice_image
from sahi.utils.coco import Coco, CocoImage
from sahi.utils.cv import (
IMAGE_EXTENSIONS,
VIDEO_EXTENSIONS,
crop_object_predictions,
cv2,
get_video_reader,
read_image_as_pil,
visualize_object_predictions,
)
from sahi.utils.file import Path, increment_path, list_files, save_json, save_pickle
from sahi.utils.import_utils import check_requirements
POSTPROCESS_NAME_TO_CLASS = {
"GREEDYNMM": GreedyNMMPostprocess,
"NMM": NMMPostprocess,
"NMS": NMSPostprocess,
"LSNMS": LSNMSPostprocess,
}
LOW_MODEL_CONFIDENCE = 0.1
logger = logging.getLogger(__name__)
def get_prediction(
image,
detection_model,
shift_amount: list = [0, 0],
full_shape=None,
postprocess: Optional[PostprocessPredictions] = None,
verbose: int = 0,
) -> PredictionResult:
"""
Function for performing prediction for given image using given detection_model.
Arguments:
image: str or np.ndarray
Location of image or numpy image matrix to slice
detection_model: model.DetectionMode
shift_amount: List
To shift the box and mask predictions from sliced image to full
sized image, should be in the form of [shift_x, shift_y]
full_shape: List
Size of the full image, should be in the form of [height, width]
postprocess: sahi.postprocess.combine.PostprocessPredictions
verbose: int
0: no print (default)
1: print prediction duration
Returns:
A dict with fields:
object_prediction_list: a list of ObjectPrediction
durations_in_seconds: a dict containing elapsed times for profiling
"""
durations_in_seconds = dict()
# read image as pil
image_as_pil = read_image_as_pil(image)
# get prediction
time_start = time.time()
detection_model.perform_inference(np.ascontiguousarray(image_as_pil))
time_end = time.time() - time_start
durations_in_seconds["prediction"] = time_end
# process prediction
time_start = time.time()
# works only with 1 batch
detection_model.convert_original_predictions(
shift_amount=shift_amount,
full_shape=full_shape,
)
object_prediction_list: List[ObjectPrediction] = detection_model.object_prediction_list
# postprocess matching predictions
if postprocess is not None:
object_prediction_list = postprocess(object_prediction_list)
time_end = time.time() - time_start
durations_in_seconds["postprocess"] = time_end
if verbose == 1:
print(
"Prediction performed in",
durations_in_seconds["prediction"],
"seconds.",
)
return PredictionResult(
image=image, object_prediction_list=object_prediction_list, durations_in_seconds=durations_in_seconds
)
def get_sliced_prediction(
image,
detection_model=None,
slice_height: int = None,
slice_width: int = None,
overlap_height_ratio: float = 0.2,
overlap_width_ratio: float = 0.2,
perform_standard_pred: bool = True,
postprocess_type: str = "GREEDYNMM",
postprocess_match_metric: str = "IOS",
postprocess_match_threshold: float = 0.5,
postprocess_class_agnostic: bool = False,
verbose: int = 1,
merge_buffer_length: int = None,
auto_slice_resolution: bool = True,
slice_export_prefix: str = None,
slice_dir: str = None,
) -> PredictionResult:
"""
Function for slice image + get predicion for each slice + combine predictions in full image.
Args:
image: str or np.ndarray
Location of image or numpy image matrix to slice
detection_model: model.DetectionModel
slice_height: int
Height of each slice. Defaults to ``None``.
slice_width: int
Width of each slice. Defaults to ``None``.
overlap_height_ratio: float
Fractional overlap in height of each window (e.g. an overlap of 0.2 for a window
of size 512 yields an overlap of 102 pixels).
Default to ``0.2``.
overlap_width_ratio: float
Fractional overlap in width of each window (e.g. an overlap of 0.2 for a window
of size 512 yields an overlap of 102 pixels).
Default to ``0.2``.
perform_standard_pred: bool
Perform a standard prediction on top of sliced predictions to increase large object
detection accuracy. Default: True.
postprocess_type: str
Type of the postprocess to be used after sliced inference while merging/eliminating predictions.
Options are 'NMM', 'GREEDYNMM' or 'NMS'. Default is 'GREEDYNMM'.
postprocess_match_metric: str
Metric to be used during object prediction matching after sliced prediction.
'IOU' for intersection over union, 'IOS' for intersection over smaller area.
postprocess_match_threshold: float
Sliced predictions having higher iou than postprocess_match_threshold will be
postprocessed after sliced prediction.
postprocess_class_agnostic: bool
If True, postprocess will ignore category ids.
verbose: int
0: no print
1: print number of slices (default)
2: print number of slices and slice/prediction durations
merge_buffer_length: int
The length of buffer for slices to be used during sliced prediction, which is suitable for low memory.
It may affect the AP if it is specified. The higher the amount, the closer results to the non-buffered.
scenario. See [the discussion](https://github.com/obss/sahi/pull/445).
auto_slice_resolution: bool
if slice parameters (slice_height, slice_width) are not given,
it enables automatically calculate these params from image resolution and orientation.
slice_export_prefix: str
Prefix for the exported slices. Defaults to None.
slice_dir: str
Directory to save the slices. Defaults to None.
Returns:
A Dict with fields:
object_prediction_list: a list of sahi.prediction.ObjectPrediction
durations_in_seconds: a dict containing elapsed times for profiling
"""
# for profiling
durations_in_seconds = dict()
# currently only 1 batch supported
num_batch = 1
# create slices from full image
time_start = time.time()
slice_image_result = slice_image(
image=image,
output_file_name=slice_export_prefix,
output_dir=slice_dir,
slice_height=slice_height,
slice_width=slice_width,
overlap_height_ratio=overlap_height_ratio,
overlap_width_ratio=overlap_width_ratio,
auto_slice_resolution=auto_slice_resolution,
)
num_slices = len(slice_image_result)
time_end = time.time() - time_start
durations_in_seconds["slice"] = time_end
# init match postprocess instance
if postprocess_type not in POSTPROCESS_NAME_TO_CLASS.keys():
raise ValueError(
f"postprocess_type should be one of {list(POSTPROCESS_NAME_TO_CLASS.keys())} but given as {postprocess_type}"
)
elif postprocess_type == "UNIONMERGE":
# deprecated in v0.9.3
raise ValueError("'UNIONMERGE' postprocess_type is deprecated, use 'GREEDYNMM' instead.")
postprocess_constructor = POSTPROCESS_NAME_TO_CLASS[postprocess_type]
postprocess = postprocess_constructor(
match_threshold=postprocess_match_threshold,
match_metric=postprocess_match_metric,
class_agnostic=postprocess_class_agnostic,
)
# create prediction input
num_group = int(num_slices / num_batch)
if verbose == 1 or verbose == 2:
tqdm.write(f"Performing prediction on {num_slices} slices.")
object_prediction_list = []
# perform sliced prediction
for group_ind in tqdm(range(num_group)):
# prepare batch (currently supports only 1 batch)
image_list = []
shift_amount_list = []
for image_ind in range(num_batch):
image_list.append(slice_image_result.images[group_ind * num_batch + image_ind])
shift_amount_list.append(slice_image_result.starting_pixels[group_ind * num_batch + image_ind])
# perform batch prediction
prediction_result = get_prediction(
image=image_list[0],
detection_model=detection_model,
shift_amount=shift_amount_list[0],
full_shape=[
slice_image_result.original_image_height,
slice_image_result.original_image_width,
],
)
# convert sliced predictions to full predictions
for object_prediction in prediction_result.object_prediction_list:
if object_prediction: # if not empty
object_prediction_list.append(object_prediction.get_shifted_object_prediction())
# merge matching predictions during sliced prediction
if merge_buffer_length is not None and len(object_prediction_list) > merge_buffer_length:
object_prediction_list = postprocess(object_prediction_list)
# perform standard prediction
if num_slices > 1 and perform_standard_pred:
prediction_result = get_prediction(
image=image,
detection_model=detection_model,
shift_amount=[0, 0],
full_shape=[
slice_image_result.original_image_height,
slice_image_result.original_image_width,
],
postprocess=None,
)
object_prediction_list.extend(prediction_result.object_prediction_list)
# merge matching predictions
if len(object_prediction_list) > 1:
object_prediction_list = postprocess(object_prediction_list)
time_end = time.time() - time_start
durations_in_seconds["prediction"] = time_end
if verbose == 2:
print(
"Slicing performed in",
durations_in_seconds["slice"],
"seconds.",
)
print(
"Prediction performed in",
durations_in_seconds["prediction"],
"seconds.",
)
return PredictionResult(
image=image, object_prediction_list=object_prediction_list, durations_in_seconds=durations_in_seconds
)
def bbox_sort(a, b, thresh):
"""
a, b - function receives two bounding bboxes
thresh - the threshold takes into account how far two bounding bboxes differ in
Y where thresh is the threshold we set for the
minimum allowable difference in height between adjacent bboxes
and sorts them by the X coordinate
"""
bbox_a = a
bbox_b = b
if abs(bbox_a[1] - bbox_b[1]) <= thresh:
return bbox_a[0] - bbox_b[0]
return bbox_a[1] - bbox_b[1]
def agg_prediction(result: PredictionResult, thresh):
coord_list = []
res = result.to_coco_annotations()
for ann in res:
current_bbox = ann["bbox"]
x = current_bbox[0]
y = current_bbox[1]
w = current_bbox[2]
h = current_bbox[3]
coord_list.append((x, y, w, h))
cnts = sorted(coord_list, key=cmp_to_key(lambda a, b: bbox_sort(a, b, thresh)))
for pred in range(len(res) - 1):
res[pred]["image_id"] = cnts.index(tuple(res[pred]["bbox"]))
return res
def predict(
detection_model: DetectionModel = None,
model_type: str = "mmdet",
model_path: str = None,
model_config_path: str = None,
model_confidence_threshold: float = 0.25,
model_device: str = None,
model_category_mapping: dict = None,
model_category_remapping: dict = None,
source: str = None,
no_standard_prediction: bool = False,
no_sliced_prediction: bool = False,
image_size: int = None,
slice_height: int = 512,
slice_width: int = 512,
overlap_height_ratio: float = 0.2,
overlap_width_ratio: float = 0.2,
postprocess_type: str = "GREEDYNMM",
postprocess_match_metric: str = "IOS",
postprocess_match_threshold: float = 0.5,
postprocess_class_agnostic: bool = False,
novisual: bool = False,
view_video: bool = False,
frame_skip_interval: int = 0,
export_pickle: bool = False,
export_crop: bool = False,
dataset_json_path: bool = None,
project: str = "runs/predict",
name: str = "exp",
visual_bbox_thickness: int = None,
visual_text_size: float = None,
visual_text_thickness: int = None,
visual_hide_labels: bool = False,
visual_hide_conf: bool = False,
visual_export_format: str = "png",
verbose: int = 1,
return_dict: bool = False,
force_postprocess_type: bool = False,
**kwargs,
):
"""
Performs prediction for all present images in given folder.
Args:
detection_model: sahi.model.DetectionModel
Optionally provide custom DetectionModel to be used for inference. When provided,
model_type, model_path, config_path, model_device, model_category_mapping, image_size
params will be ignored
model_type: str
mmdet for 'MmdetDetectionModel', 'yolov5' for 'Yolov5DetectionModel'.
model_path: str
Path for the model weight
model_config_path: str
Path for the detection model config file
model_confidence_threshold: float
All predictions with score < model_confidence_threshold will be discarded.
model_device: str
Torch device, "cpu" or "cuda"
model_category_mapping: dict
Mapping from category id (str) to category name (str) e.g. {"1": "pedestrian"}
model_category_remapping: dict: str to int
Remap category ids after performing inference
source: str
Folder directory that contains images or path of the image to be predicted. Also video to be predicted.
no_standard_prediction: bool
Dont perform standard prediction. Default: False.
no_sliced_prediction: bool
Dont perform sliced prediction. Default: False.
image_size: int
Input image size for each inference (image is scaled by preserving asp. rat.).
slice_height: int
Height of each slice. Defaults to ``512``.
slice_width: int
Width of each slice. Defaults to ``512``.
overlap_height_ratio: float
Fractional overlap in height of each window (e.g. an overlap of 0.2 for a window
of size 512 yields an overlap of 102 pixels).
Default to ``0.2``.
overlap_width_ratio: float
Fractional overlap in width of each window (e.g. an overlap of 0.2 for a window
of size 512 yields an overlap of 102 pixels).
Default to ``0.2``.
postprocess_type: str
Type of the postprocess to be used after sliced inference while merging/eliminating predictions.
Options are 'NMM', 'GREEDYNMM', 'LSNMS' or 'NMS'. Default is 'GREEDYNMM'.
postprocess_match_metric: str
Metric to be used during object prediction matching after sliced prediction.
'IOU' for intersection over union, 'IOS' for intersection over smaller area.
postprocess_match_threshold: float
Sliced predictions having higher iou than postprocess_match_threshold will be
postprocessed after sliced prediction.
postprocess_class_agnostic: bool
If True, postprocess will ignore category ids.
novisual: bool
Dont export predicted video/image visuals.
view_video: bool
View result of prediction during video inference.
frame_skip_interval: int
If view_video or export_visual is slow, you can process one frames of 3(for exp: --frame_skip_interval=3).
export_pickle: bool
Export predictions as .pickle
export_crop: bool
Export predictions as cropped images.
dataset_json_path: str
If coco file path is provided, detection results will be exported in coco json format.
project: str
Save results to project/name.
name: str
Save results to project/name.
visual_bbox_thickness: int
visual_text_size: float
visual_text_thickness: int
visual_hide_labels: bool
visual_hide_conf: bool
visual_export_format: str
Can be specified as 'jpg' or 'png'
verbose: int
0: no print
1: print slice/prediction durations, number of slices
2: print model loading/file exporting durations
return_dict: bool
If True, returns a dict with 'export_dir' field.
force_postprocess_type: bool
If True, auto postprocess check will e disabled
"""
# assert prediction type
if no_standard_prediction and no_sliced_prediction:
raise ValueError("'no_standard_prediction' and 'no_sliced_prediction' cannot be True at the same time.")
# auto postprocess type
if not force_postprocess_type and model_confidence_threshold < LOW_MODEL_CONFIDENCE and postprocess_type != "NMS":
logger.warning(
f"Switching postprocess type/metric to NMS/IOU since confidence threshold is low ({model_confidence_threshold})."
)
postprocess_type = "NMS"
postprocess_match_metric = "IOU"
# for profiling
durations_in_seconds = dict()
# init export directories
save_dir = Path(increment_path(Path(project) / name, exist_ok=False)) # increment run
crop_dir = save_dir / "crops"
visual_dir = save_dir / "visuals"
visual_with_gt_dir = save_dir / "visuals_with_gt"
pickle_dir = save_dir / "pickles"
if not novisual or export_pickle or export_crop or dataset_json_path is not None:
save_dir.mkdir(parents=True, exist_ok=True) # make dir
# init image iterator
# TODO: rewrite this as iterator class as in https://github.com/ultralytics/yolov5/blob/d059d1da03aee9a3c0059895aa4c7c14b7f25a9e/utils/datasets.py#L178
source_is_video = False
num_frames = None
if dataset_json_path:
coco: Coco = Coco.from_coco_dict_or_path(dataset_json_path)
image_iterator = [str(Path(source) / Path(coco_image.file_name)) for coco_image in coco.images]
coco_json = []
elif os.path.isdir(source):
image_iterator = list_files(
directory=source,
contains=IMAGE_EXTENSIONS,
verbose=verbose,
)
elif Path(source).suffix in VIDEO_EXTENSIONS:
source_is_video = True
read_video_frame, output_video_writer, video_file_name, num_frames = get_video_reader(
source, save_dir, frame_skip_interval, not novisual, view_video
)
image_iterator = read_video_frame
else:
image_iterator = [source]
# init model instance
time_start = time.time()
if detection_model is None:
detection_model = AutoDetectionModel.from_pretrained(
model_type=model_type,
model_path=model_path,
config_path=model_config_path,
confidence_threshold=model_confidence_threshold,
device=model_device,
category_mapping=model_category_mapping,
category_remapping=model_category_remapping,
load_at_init=False,
image_size=image_size,
**kwargs,
)
detection_model.load_model()
time_end = time.time() - time_start
durations_in_seconds["model_load"] = time_end
# iterate over source images
durations_in_seconds["prediction"] = 0
durations_in_seconds["slice"] = 0
input_type_str = "video frames" if source_is_video else "images"
for ind, image_path in enumerate(
tqdm(image_iterator, f"Performing inference on {input_type_str}", total=num_frames)
):
# get filename
if source_is_video:
video_name = Path(source).stem
relative_filepath = video_name + "_frame_" + str(ind)
elif os.path.isdir(source): # preserve source folder structure in export
relative_filepath = str(Path(image_path)).split(str(Path(source)))[-1]
relative_filepath = relative_filepath[1:] if relative_filepath[0] == os.sep else relative_filepath
else: # no process if source is single file
relative_filepath = Path(image_path).name
filename_without_extension = Path(relative_filepath).stem
# load image
image_as_pil = read_image_as_pil(image_path)
# perform prediction
if not no_sliced_prediction:
# get sliced prediction
prediction_result = get_sliced_prediction(
image=image_as_pil,
detection_model=detection_model,
slice_height=slice_height,
slice_width=slice_width,
overlap_height_ratio=overlap_height_ratio,
overlap_width_ratio=overlap_width_ratio,
perform_standard_pred=not no_standard_prediction,
postprocess_type=postprocess_type,
postprocess_match_metric=postprocess_match_metric,
postprocess_match_threshold=postprocess_match_threshold,
postprocess_class_agnostic=postprocess_class_agnostic,
verbose=1 if verbose else 0,
)
object_prediction_list = prediction_result.object_prediction_list
durations_in_seconds["slice"] += prediction_result.durations_in_seconds["slice"]
else:
# get standard prediction
prediction_result = get_prediction(
image=image_as_pil,
detection_model=detection_model,
shift_amount=[0, 0],
full_shape=None,
postprocess=None,
verbose=0,
)
object_prediction_list = prediction_result.object_prediction_list
durations_in_seconds["prediction"] += prediction_result.durations_in_seconds["prediction"]
# Show prediction time
if verbose:
tqdm.write(
"Prediction time is: {:.2f} ms".format(prediction_result.durations_in_seconds["prediction"] * 1000)
)
if dataset_json_path:
if source_is_video is True:
raise NotImplementedError("Video input type not supported with coco formatted dataset json")
# append predictions in coco format
for object_prediction in object_prediction_list:
coco_prediction = object_prediction.to_coco_prediction()
coco_prediction.image_id = coco.images[ind].id
coco_prediction_json = coco_prediction.json
if coco_prediction_json["bbox"]:
coco_json.append(coco_prediction_json)
if not novisual:
# convert ground truth annotations to object_prediction_list
coco_image: CocoImage = coco.images[ind]
object_prediction_gt_list: List[ObjectPrediction] = []
for coco_annotation in coco_image.annotations:
coco_annotation_dict = coco_annotation.json
category_name = coco_annotation.category_name
full_shape = [coco_image.height, coco_image.width]
object_prediction_gt = ObjectPrediction.from_coco_annotation_dict(
annotation_dict=coco_annotation_dict, category_name=category_name, full_shape=full_shape
)
object_prediction_gt_list.append(object_prediction_gt)
# export visualizations with ground truths
output_dir = str(visual_with_gt_dir / Path(relative_filepath).parent)
color = (0, 255, 0) # original annotations in green
result = visualize_object_predictions(
np.ascontiguousarray(image_as_pil),
object_prediction_list=object_prediction_gt_list,
rect_th=visual_bbox_thickness,
text_size=visual_text_size,
text_th=visual_text_thickness,
color=color,
hide_labels=visual_hide_labels,
hide_conf=visual_hide_conf,
output_dir=None,
file_name=None,
export_format=None,
)
color = (255, 0, 0) # model predictions in red
_ = visualize_object_predictions(
result["image"],
object_prediction_list=object_prediction_list,
rect_th=visual_bbox_thickness,
text_size=visual_text_size,
text_th=visual_text_thickness,
color=color,
hide_labels=visual_hide_labels,
hide_conf=visual_hide_conf,
output_dir=output_dir,
file_name=filename_without_extension,
export_format=visual_export_format,
)
time_start = time.time()
# export prediction boxes
if export_crop:
output_dir = str(crop_dir / Path(relative_filepath).parent)
crop_object_predictions(
image=np.ascontiguousarray(image_as_pil),
object_prediction_list=object_prediction_list,
output_dir=output_dir,
file_name=filename_without_extension,
export_format=visual_export_format,
)
# export prediction list as pickle
if export_pickle:
save_path = str(pickle_dir / Path(relative_filepath).parent / (filename_without_extension + ".pickle"))
save_pickle(data=object_prediction_list, save_path=save_path)
# export visualization
if not novisual or view_video:
output_dir = str(visual_dir / Path(relative_filepath).parent)
result = visualize_object_predictions(
np.ascontiguousarray(image_as_pil),
object_prediction_list=object_prediction_list,
rect_th=visual_bbox_thickness,
text_size=visual_text_size,
text_th=visual_text_thickness,
hide_labels=visual_hide_labels,
hide_conf=visual_hide_conf,
output_dir=output_dir if not source_is_video else None,
file_name=filename_without_extension,
export_format=visual_export_format,
)
if not novisual and source_is_video: # export video
output_video_writer.write(cv2.cvtColor(result["image"], cv2.COLOR_RGB2BGR))
# render video inference
if view_video:
cv2.imshow("Prediction of {}".format(str(video_file_name)), result["image"])
cv2.waitKey(1)
time_end = time.time() - time_start
durations_in_seconds["export_files"] = time_end
# export coco results
if dataset_json_path:
save_path = str(save_dir / "result.json")
save_json(coco_json, save_path)
if not novisual or export_pickle or export_crop or dataset_json_path is not None:
print(f"Prediction results are successfully exported to {save_dir}")
# print prediction duration
if verbose == 2:
print(
"Model loaded in",
durations_in_seconds["model_load"],
"seconds.",
)
print(
"Slicing performed in",
durations_in_seconds["slice"],
"seconds.",
)
print(
"Prediction performed in",
durations_in_seconds["prediction"],
"seconds.",
)
if not novisual:
print(
"Exporting performed in",
durations_in_seconds["export_files"],
"seconds.",
)
if return_dict:
return {"export_dir": save_dir}
def predict_fiftyone(
model_type: str = "mmdet",
model_path: str = None,
model_config_path: str = None,
model_confidence_threshold: float = 0.25,
model_device: str = None,
model_category_mapping: dict = None,
model_category_remapping: dict = None,
dataset_json_path: str = None,
image_dir: str = None,
no_standard_prediction: bool = False,
no_sliced_prediction: bool = False,
image_size: int = None,
slice_height: int = 256,
slice_width: int = 256,
overlap_height_ratio: float = 0.2,
overlap_width_ratio: float = 0.2,
postprocess_type: str = "GREEDYNMM",
postprocess_match_metric: str = "IOS",
postprocess_match_threshold: float = 0.5,
postprocess_class_agnostic: bool = False,
verbose: int = 1,
):
"""
Performs prediction for all present images in given folder.
Args:
model_type: str
mmdet for 'MmdetDetectionModel', 'yolov5' for 'Yolov5DetectionModel'.
model_path: str
Path for the model weight
model_config_path: str
Path for the detection model config file
model_confidence_threshold: float
All predictions with score < model_confidence_threshold will be discarded.
model_device: str
Torch device, "cpu" or "cuda"
model_category_mapping: dict
Mapping from category id (str) to category name (str) e.g. {"1": "pedestrian"}
model_category_remapping: dict: str to int
Remap category ids after performing inference
dataset_json_path: str
If coco file path is provided, detection results will be exported in coco json format.
image_dir: str
Folder directory that contains images or path of the image to be predicted.
no_standard_prediction: bool
Dont perform standard prediction. Default: False.
no_sliced_prediction: bool
Dont perform sliced prediction. Default: False.
image_size: int
Input image size for each inference (image is scaled by preserving asp. rat.).
slice_height: int
Height of each slice. Defaults to ``256``.
slice_width: int
Width of each slice. Defaults to ``256``.
overlap_height_ratio: float
Fractional overlap in height of each window (e.g. an overlap of 0.2 for a window
of size 256 yields an overlap of 51 pixels).
Default to ``0.2``.
overlap_width_ratio: float
Fractional overlap in width of each window (e.g. an overlap of 0.2 for a window
of size 256 yields an overlap of 51 pixels).
Default to ``0.2``.
postprocess_type: str
Type of the postprocess to be used after sliced inference while merging/eliminating predictions.
Options are 'NMM', 'GREEDYNMM' or 'NMS'. Default is 'GREEDYNMM'.
postprocess_match_metric: str
Metric to be used during object prediction matching after sliced prediction.
'IOU' for intersection over union, 'IOS' for intersection over smaller area.
postprocess_match_metric: str
Metric to be used during object prediction matching after sliced prediction.
'IOU' for intersection over union, 'IOS' for intersection over smaller area.
postprocess_match_threshold: float
Sliced predictions having higher iou than postprocess_match_threshold will be
postprocessed after sliced prediction.
postprocess_class_agnostic: bool
If True, postprocess will ignore category ids.
verbose: int
0: no print
1: print slice/prediction durations, number of slices, model loading/file exporting durations
"""
check_requirements(["fiftyone"])
from sahi.utils.fiftyone import create_fiftyone_dataset_from_coco_file, fo
# assert prediction type
if no_standard_prediction and no_sliced_prediction:
raise ValueError("'no_standard_pred' and 'no_sliced_prediction' cannot be True at the same time.")
# for profiling
durations_in_seconds = dict()
dataset = create_fiftyone_dataset_from_coco_file(image_dir, dataset_json_path)
# init model instance
time_start = time.time()
detection_model = AutoDetectionModel.from_pretrained(
model_type=model_type,
model_path=model_path,
config_path=model_config_path,
confidence_threshold=model_confidence_threshold,
device=model_device,
category_mapping=model_category_mapping,
category_remapping=model_category_remapping,
load_at_init=False,
image_size=image_size,
)
detection_model.load_model()
time_end = time.time() - time_start
durations_in_seconds["model_load"] = time_end
# iterate over source images
durations_in_seconds["prediction"] = 0
durations_in_seconds["slice"] = 0
# Add predictions to samples
with fo.ProgressBar() as pb:
for sample in pb(dataset):
# perform prediction
if not no_sliced_prediction:
# get sliced prediction
prediction_result = get_sliced_prediction(
image=sample.filepath,
detection_model=detection_model,
slice_height=slice_height,
slice_width=slice_width,
overlap_height_ratio=overlap_height_ratio,
overlap_width_ratio=overlap_width_ratio,
perform_standard_pred=not no_standard_prediction,
postprocess_type=postprocess_type,
postprocess_match_threshold=postprocess_match_threshold,
postprocess_match_metric=postprocess_match_metric,
postprocess_class_agnostic=postprocess_class_agnostic,
verbose=verbose,
)
durations_in_seconds["slice"] += prediction_result.durations_in_seconds["slice"]
else:
# get standard prediction
prediction_result = get_prediction(
image=sample.filepath,
detection_model=detection_model,
shift_amount=[0, 0],
full_shape=None,
postprocess=None,
verbose=0,
)
durations_in_seconds["prediction"] += prediction_result.durations_in_seconds["prediction"]
# Save predictions to dataset
sample[model_type] = fo.Detections(detections=prediction_result.to_fiftyone_detections())
sample.save()
# print prediction duration
if verbose == 1:
print(
"Model loaded in",
durations_in_seconds["model_load"],
"seconds.",
)
print(
"Slicing performed in",
durations_in_seconds["slice"],
"seconds.",
)
print(
"Prediction performed in",
durations_in_seconds["prediction"],
"seconds.",
)
# visualize results
session = fo.launch_app()
session.dataset = dataset
# Evaluate the predictions
results = dataset.evaluate_detections(
model_type,
gt_field="ground_truth",
eval_key="eval",
iou=postprocess_match_threshold,
compute_mAP=True,
)
# Get the 10 most common classes in the dataset
counts = dataset.count_values("ground_truth.detections.label")
classes_top10 = sorted(counts, key=counts.get, reverse=True)[:10]
# Print a classification report for the top-10 classes
results.print_report(classes=classes_top10)
# Load the view on which we ran the `eval` evaluation
eval_view = dataset.load_evaluation_view("eval")
# Show samples with most false positives
session.view = eval_view.sort_by("eval_fp", reverse=True)
while 1:
time.sleep(3)