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bamtocov generated "ERROR: coverage went backwards from 0 to 0" #11

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ChooseelBunsuwansakul opened this issue Aug 20, 2023 · 1 comment
Open

bamtocov generated "ERROR: coverage went backwards from 0 to 0" #11

ChooseelBunsuwansakul opened this issue Aug 20, 2023 · 1 comment

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@ChooseelBunsuwansakul
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Describe the issue
bamtocov file.bam generated "ERROR: coverage went backwards from 0 to 0"

System information (please complete the following information):

  • UBUNTU 20.04 app

Additional context
I do not know what the error means. I generated bam file using minimap2 in Galaxy and I successfully visualized the bam file in IGV.

Thank you in advance.
@telatin
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telatin commented Oct 22, 2024

Hi there, sorry for my late comment. was the file sorted?

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@telatin @ChooseelBunsuwansakul