SeqFu v1.9.3

• bugfix: seqfu cat controls the length of operations (truncate, trim)
• improved: seqfu cat improved renaming options (basename and strip-name will now add a progressive number automatically)

SeqFu v1.9.2

• Bugfix on Seqfu Detabulate

v1.9.1

• Fixes #8
• This is a re-release finally with all the necessary commits... What a mess :)

v1.9.0 – 🎅 Santa edition

• seqfu grep now has -w (word) and -f (full) match options. default behaviour unchanged.
• seqfu cat now has a filter for Ns (--max-ns INT)
• seqfu cat now has a filter for the total expected errors (--max-ee FLOAT), and can report --add-ee and --add-initial-ee
• Added header line in seqfu metadata when using "irida" formats

SeqFu v1.8.9

• Improved fu-msa

SeqFu v1.8.8

• Introduced the experimental multiple alignment viewer fu-msa

SeqFu v1.8.7

• Improved performance
• Added Makefile

SeqFu v1.8.6

• Added seqfu rotate

v1.8.5 fu-orf

Supporting NCBI Genetic Codes in fu-orf

SeqFu v1.8.4

• fu-orf
  • Fixed bug in fu-orf to allow for single sequences
  • Introduced -r, --scan-reverse to include reverse complement in the ORF finder
  • fu-orf also prints frame in the sequence comment
• Expanded test suite