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in code line “#Subcluster mature enterocytes
sc.tl.louvain(adata, restrict_to=('louvain_r0.5_entero_sub', ['Enterocyte mature']), resolution=0.25, key_added='louvain_r0.5_entero_mat_sub')”
i run ,appear error :ValueError: 'Enterocyte mature' is not a valid category for 'louvain_r0.5_entero_sub'
The text was updated successfully, but these errors were encountered:
This line relies on you having renamed your clusters as indicated in the notebook. You can check what your cluster names are via adata.obs['louvain_r0.5_entero_sub'].value_counts(). The output of that will tell you what your clusters are called (and how many cells are in each cluster). You can then rename the 'Enterocyte matrue' string to the particular cluster you'd like to subcluster.
in code line “#Subcluster mature enterocytes
sc.tl.louvain(adata, restrict_to=('louvain_r0.5_entero_sub', ['Enterocyte mature']), resolution=0.25, key_added='louvain_r0.5_entero_mat_sub')”
i run ,appear error :ValueError: 'Enterocyte mature' is not a valid category for 'louvain_r0.5_entero_sub'
The text was updated successfully, but these errors were encountered: